Hubei narna-like virus 24

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KIB4|A0A1L3KIB4_9VIRU RNA-dependent RNA polymerase OS=Hubei narna-like virus 24 OX=1922955 PE=4 SV=1
MM1 pKa = 8.13DD2 pKa = 3.55NTITHH7 pKa = 7.21ALCYY11 pKa = 9.64AANITLGKK19 pKa = 9.63DD20 pKa = 2.94AKK22 pKa = 10.55PFIEE26 pKa = 5.11RR27 pKa = 11.84IEE29 pKa = 4.45HH30 pKa = 5.7FLSHH34 pKa = 6.87NGTEE38 pKa = 4.24YY39 pKa = 10.37TVNRR43 pKa = 11.84LKK45 pKa = 10.9VIYY48 pKa = 10.05QGALLLRR55 pKa = 11.84EE56 pKa = 4.12YY57 pKa = 10.51DD58 pKa = 3.47QLGRR62 pKa = 11.84PVDD65 pKa = 3.64TDD67 pKa = 3.64FLGNTNRR74 pKa = 11.84GSFDD78 pKa = 3.42QAVKK82 pKa = 10.4LYY84 pKa = 9.92HH85 pKa = 6.63EE86 pKa = 4.85NGIATSKK93 pKa = 10.46KK94 pKa = 10.25GYY96 pKa = 9.24PKK98 pKa = 10.51DD99 pKa = 3.29STGIVVRR106 pKa = 11.84QFVEE110 pKa = 4.25SNRR113 pKa = 11.84PQVIRR118 pKa = 11.84NMTGLLRR125 pKa = 11.84SYY127 pKa = 9.11TQFRR131 pKa = 11.84LDD133 pKa = 3.75SVSQQQVDD141 pKa = 3.74KK142 pKa = 10.87VVEE145 pKa = 4.56SVCMPRR151 pKa = 11.84DD152 pKa = 3.32RR153 pKa = 11.84AHH155 pKa = 7.77DD156 pKa = 3.87EE157 pKa = 3.92NQLFDD162 pKa = 4.22NLIHH166 pKa = 7.35LSRR169 pKa = 11.84VPKK172 pKa = 10.51ALWNKK177 pKa = 9.46SIKK180 pKa = 10.37AEE182 pKa = 4.04RR183 pKa = 11.84LSMDD187 pKa = 3.78CLRR190 pKa = 11.84PYY192 pKa = 10.09TSVYY196 pKa = 10.41CHH198 pKa = 6.54GSVPKK203 pKa = 10.15HH204 pKa = 6.25VKK206 pKa = 10.29DD207 pKa = 3.73EE208 pKa = 4.6PYY210 pKa = 11.12GKK212 pKa = 10.11ALYY215 pKa = 11.24SMITTSYY222 pKa = 10.37LPSPLEE228 pKa = 3.81SVVPSKK234 pKa = 10.77SIRR237 pKa = 11.84DD238 pKa = 3.73RR239 pKa = 11.84VRR241 pKa = 11.84SWMPRR246 pKa = 11.84EE247 pKa = 3.86NDD249 pKa = 3.38YY250 pKa = 11.59DD251 pKa = 3.76PEE253 pKa = 4.1QYY255 pKa = 10.42AGKK258 pKa = 9.5IHH260 pKa = 7.37IIQEE264 pKa = 4.07AGAKK268 pKa = 9.44ARR270 pKa = 11.84TVAIPNGWTQIGFVPLHH287 pKa = 6.78DD288 pKa = 3.84QMQLEE293 pKa = 4.47SEE295 pKa = 4.56RR296 pKa = 11.84YY297 pKa = 8.48FPSEE301 pKa = 3.82SCVFDD306 pKa = 3.59QLKK309 pKa = 10.67GIYY312 pKa = 10.0ALRR315 pKa = 11.84NHH317 pKa = 6.4MGDD320 pKa = 2.55GKK322 pKa = 9.21TPVSVDD328 pKa = 3.47LSSATDD334 pKa = 3.6RR335 pKa = 11.84FPIEE339 pKa = 4.25FQCKK343 pKa = 8.47LLSHH347 pKa = 7.12IGLPFYY353 pKa = 10.94SDD355 pKa = 3.51SLSEE359 pKa = 4.05LVKK362 pKa = 10.9KK363 pKa = 10.07PWEE366 pKa = 4.31FPQGKK371 pKa = 8.37PFGYY375 pKa = 10.66DD376 pKa = 2.66SVYY379 pKa = 11.09YY380 pKa = 10.54NAGQPMGLYY389 pKa = 10.38GSFPTFHH396 pKa = 7.21FSNLVMADD404 pKa = 3.75ASCRR408 pKa = 11.84LTDD411 pKa = 3.64YY412 pKa = 11.18QIGEE416 pKa = 4.43TIDD419 pKa = 3.83GKK421 pKa = 11.2GKK423 pKa = 9.31EE424 pKa = 4.16QVAGIVYY431 pKa = 8.65EE432 pKa = 4.03RR433 pKa = 11.84LYY435 pKa = 11.24GFYY438 pKa = 10.75AHH440 pKa = 7.66RR441 pKa = 11.84DD442 pKa = 3.32KK443 pKa = 11.34DD444 pKa = 4.33TVPDD448 pKa = 4.73DD449 pKa = 4.04YY450 pKa = 11.45IEE452 pKa = 4.47RR453 pKa = 11.84NNILGNAAGDD463 pKa = 4.01SPVSKK468 pKa = 10.26FYY470 pKa = 10.97DD471 pKa = 3.5GSRR474 pKa = 11.84FKK476 pKa = 11.36VLGDD480 pKa = 4.48DD481 pKa = 3.96IVFSDD486 pKa = 4.05EE487 pKa = 4.18RR488 pKa = 11.84DD489 pKa = 3.24AAHH492 pKa = 5.73YY493 pKa = 7.92TKK495 pKa = 10.39IMKK498 pKa = 8.63TINVPISHH506 pKa = 6.87HH507 pKa = 6.26KK508 pKa = 10.31SFSKK512 pKa = 10.9GMVCEE517 pKa = 4.15FAGAIAMRR525 pKa = 11.84TKK527 pKa = 10.62KK528 pKa = 10.46SNKK531 pKa = 8.4DD532 pKa = 2.88RR533 pKa = 11.84RR534 pKa = 11.84YY535 pKa = 9.77DD536 pKa = 3.37VSIFRR541 pKa = 11.84PYY543 pKa = 10.76KK544 pKa = 9.47FPKK547 pKa = 10.14DD548 pKa = 3.26GSFIGNPISFIYY560 pKa = 10.35AFSSPQSKK568 pKa = 9.76QRR570 pKa = 11.84VSKK573 pKa = 9.95KK574 pKa = 7.69WKK576 pKa = 9.99QFFEE580 pKa = 5.47DD581 pKa = 3.79FDD583 pKa = 3.53KK584 pKa = 11.1TRR586 pKa = 11.84PQRR589 pKa = 11.84YY590 pKa = 9.4ADD592 pKa = 4.31LCPITPFVEE601 pKa = 4.0DD602 pKa = 2.75RR603 pKa = 11.84VGIVGRR609 pKa = 11.84FRR611 pKa = 11.84DD612 pKa = 3.54QDD614 pKa = 2.83IDD616 pKa = 3.78RR617 pKa = 11.84VVDD620 pKa = 3.99NIYY623 pKa = 10.63RR624 pKa = 11.84FSNLSFFPYY633 pKa = 10.19TDD635 pKa = 3.22TGKK638 pKa = 8.81DD639 pKa = 3.13TPIIYY644 pKa = 9.87DD645 pKa = 3.7GPRR648 pKa = 11.84NRR650 pKa = 11.84APLYY654 pKa = 9.31QVPLFIKK661 pKa = 10.26KK662 pKa = 10.13KK663 pKa = 8.82GIEE666 pKa = 4.03VPGFEE671 pKa = 4.43TQRR674 pKa = 11.84PASDD678 pKa = 2.92TRR680 pKa = 11.84SYY682 pKa = 11.78AEE684 pKa = 4.01TVKK687 pKa = 10.66RR688 pKa = 11.84LYY690 pKa = 10.75SDD692 pKa = 4.2PLMKK696 pKa = 10.43AQQKK700 pKa = 6.03TRR702 pKa = 11.84KK703 pKa = 8.91SSAMKK708 pKa = 10.13II709 pKa = 3.65

Molecular weight: 81.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KIB4|A0A1L3KIB4_9VIRU RNA-dependent RNA polymerase OS=Hubei narna-like virus 24 OX=1922955 PE=4 SV=1
MM1 pKa = 8.13DD2 pKa = 3.55NTITHH7 pKa = 7.21ALCYY11 pKa = 9.64AANITLGKK19 pKa = 9.63DD20 pKa = 2.94AKK22 pKa = 10.55PFIEE26 pKa = 5.11RR27 pKa = 11.84IEE29 pKa = 4.45HH30 pKa = 5.7FLSHH34 pKa = 6.87NGTEE38 pKa = 4.24YY39 pKa = 10.37TVNRR43 pKa = 11.84LKK45 pKa = 10.9VIYY48 pKa = 10.05QGALLLRR55 pKa = 11.84EE56 pKa = 4.12YY57 pKa = 10.51DD58 pKa = 3.47QLGRR62 pKa = 11.84PVDD65 pKa = 3.64TDD67 pKa = 3.64FLGNTNRR74 pKa = 11.84GSFDD78 pKa = 3.42QAVKK82 pKa = 10.4LYY84 pKa = 9.92HH85 pKa = 6.63EE86 pKa = 4.85NGIATSKK93 pKa = 10.46KK94 pKa = 10.25GYY96 pKa = 9.24PKK98 pKa = 10.51DD99 pKa = 3.29STGIVVRR106 pKa = 11.84QFVEE110 pKa = 4.25SNRR113 pKa = 11.84PQVIRR118 pKa = 11.84NMTGLLRR125 pKa = 11.84SYY127 pKa = 9.11TQFRR131 pKa = 11.84LDD133 pKa = 3.75SVSQQQVDD141 pKa = 3.74KK142 pKa = 10.87VVEE145 pKa = 4.56SVCMPRR151 pKa = 11.84DD152 pKa = 3.32RR153 pKa = 11.84AHH155 pKa = 7.77DD156 pKa = 3.87EE157 pKa = 3.92NQLFDD162 pKa = 4.22NLIHH166 pKa = 7.35LSRR169 pKa = 11.84VPKK172 pKa = 10.51ALWNKK177 pKa = 9.46SIKK180 pKa = 10.37AEE182 pKa = 4.04RR183 pKa = 11.84LSMDD187 pKa = 3.78CLRR190 pKa = 11.84PYY192 pKa = 10.09TSVYY196 pKa = 10.41CHH198 pKa = 6.54GSVPKK203 pKa = 10.15HH204 pKa = 6.25VKK206 pKa = 10.29DD207 pKa = 3.73EE208 pKa = 4.6PYY210 pKa = 11.12GKK212 pKa = 10.11ALYY215 pKa = 11.24SMITTSYY222 pKa = 10.37LPSPLEE228 pKa = 3.81SVVPSKK234 pKa = 10.77SIRR237 pKa = 11.84DD238 pKa = 3.73RR239 pKa = 11.84VRR241 pKa = 11.84SWMPRR246 pKa = 11.84EE247 pKa = 3.86NDD249 pKa = 3.38YY250 pKa = 11.59DD251 pKa = 3.76PEE253 pKa = 4.1QYY255 pKa = 10.42AGKK258 pKa = 9.5IHH260 pKa = 7.37IIQEE264 pKa = 4.07AGAKK268 pKa = 9.44ARR270 pKa = 11.84TVAIPNGWTQIGFVPLHH287 pKa = 6.78DD288 pKa = 3.84QMQLEE293 pKa = 4.47SEE295 pKa = 4.56RR296 pKa = 11.84YY297 pKa = 8.48FPSEE301 pKa = 3.82SCVFDD306 pKa = 3.59QLKK309 pKa = 10.67GIYY312 pKa = 10.0ALRR315 pKa = 11.84NHH317 pKa = 6.4MGDD320 pKa = 2.55GKK322 pKa = 9.21TPVSVDD328 pKa = 3.47LSSATDD334 pKa = 3.6RR335 pKa = 11.84FPIEE339 pKa = 4.25FQCKK343 pKa = 8.47LLSHH347 pKa = 7.12IGLPFYY353 pKa = 10.94SDD355 pKa = 3.51SLSEE359 pKa = 4.05LVKK362 pKa = 10.9KK363 pKa = 10.07PWEE366 pKa = 4.31FPQGKK371 pKa = 8.37PFGYY375 pKa = 10.66DD376 pKa = 2.66SVYY379 pKa = 11.09YY380 pKa = 10.54NAGQPMGLYY389 pKa = 10.38GSFPTFHH396 pKa = 7.21FSNLVMADD404 pKa = 3.75ASCRR408 pKa = 11.84LTDD411 pKa = 3.64YY412 pKa = 11.18QIGEE416 pKa = 4.43TIDD419 pKa = 3.83GKK421 pKa = 11.2GKK423 pKa = 9.31EE424 pKa = 4.16QVAGIVYY431 pKa = 8.65EE432 pKa = 4.03RR433 pKa = 11.84LYY435 pKa = 11.24GFYY438 pKa = 10.75AHH440 pKa = 7.66RR441 pKa = 11.84DD442 pKa = 3.32KK443 pKa = 11.34DD444 pKa = 4.33TVPDD448 pKa = 4.73DD449 pKa = 4.04YY450 pKa = 11.45IEE452 pKa = 4.47RR453 pKa = 11.84NNILGNAAGDD463 pKa = 4.01SPVSKK468 pKa = 10.26FYY470 pKa = 10.97DD471 pKa = 3.5GSRR474 pKa = 11.84FKK476 pKa = 11.36VLGDD480 pKa = 4.48DD481 pKa = 3.96IVFSDD486 pKa = 4.05EE487 pKa = 4.18RR488 pKa = 11.84DD489 pKa = 3.24AAHH492 pKa = 5.73YY493 pKa = 7.92TKK495 pKa = 10.39IMKK498 pKa = 8.63TINVPISHH506 pKa = 6.87HH507 pKa = 6.26KK508 pKa = 10.31SFSKK512 pKa = 10.9GMVCEE517 pKa = 4.15FAGAIAMRR525 pKa = 11.84TKK527 pKa = 10.62KK528 pKa = 10.46SNKK531 pKa = 8.4DD532 pKa = 2.88RR533 pKa = 11.84RR534 pKa = 11.84YY535 pKa = 9.77DD536 pKa = 3.37VSIFRR541 pKa = 11.84PYY543 pKa = 10.76KK544 pKa = 9.47FPKK547 pKa = 10.14DD548 pKa = 3.26GSFIGNPISFIYY560 pKa = 10.35AFSSPQSKK568 pKa = 9.76QRR570 pKa = 11.84VSKK573 pKa = 9.95KK574 pKa = 7.69WKK576 pKa = 9.99QFFEE580 pKa = 5.47DD581 pKa = 3.79FDD583 pKa = 3.53KK584 pKa = 11.1TRR586 pKa = 11.84PQRR589 pKa = 11.84YY590 pKa = 9.4ADD592 pKa = 4.31LCPITPFVEE601 pKa = 4.0DD602 pKa = 2.75RR603 pKa = 11.84VGIVGRR609 pKa = 11.84FRR611 pKa = 11.84DD612 pKa = 3.54QDD614 pKa = 2.83IDD616 pKa = 3.78RR617 pKa = 11.84VVDD620 pKa = 3.99NIYY623 pKa = 10.63RR624 pKa = 11.84FSNLSFFPYY633 pKa = 10.19TDD635 pKa = 3.22TGKK638 pKa = 8.81DD639 pKa = 3.13TPIIYY644 pKa = 9.87DD645 pKa = 3.7GPRR648 pKa = 11.84NRR650 pKa = 11.84APLYY654 pKa = 9.31QVPLFIKK661 pKa = 10.26KK662 pKa = 10.13KK663 pKa = 8.82GIEE666 pKa = 4.03VPGFEE671 pKa = 4.43TQRR674 pKa = 11.84PASDD678 pKa = 2.92TRR680 pKa = 11.84SYY682 pKa = 11.78AEE684 pKa = 4.01TVKK687 pKa = 10.66RR688 pKa = 11.84LYY690 pKa = 10.75SDD692 pKa = 4.2PLMKK696 pKa = 10.43AQQKK700 pKa = 6.03TRR702 pKa = 11.84KK703 pKa = 8.91SSAMKK708 pKa = 10.13II709 pKa = 3.65

Molecular weight: 81.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

709

709

709

709.0

81.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.219 ± 0.0

1.269 ± 0.0

7.475 ± 0.0

4.372 ± 0.0

5.501 ± 0.0

6.206 ± 0.0

2.398 ± 0.0

6.065 ± 0.0

7.193 ± 0.0

6.206 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.116 ± 0.0

3.667 ± 0.0

6.065 ± 0.0

4.231 ± 0.0

6.629 ± 0.0

8.039 ± 0.0

4.795 ± 0.0

6.488 ± 0.0

0.705 ± 0.0

5.36 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski