Fire ant associated circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses; Cruciviridae; Crucivirus

Average proteome isoelectric point is 6.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BPB1|A0A346BPB1_9VIRU Putative capsid protein OS=Fire ant associated circular virus 1 OX=2293280 PE=3 SV=1
MM1 pKa = 7.79ASTKK5 pKa = 10.25KK6 pKa = 10.46FRR8 pKa = 11.84FQNTSALLTYY18 pKa = 8.3KK19 pKa = 9.25THH21 pKa = 7.07LDD23 pKa = 3.04KK24 pKa = 10.96KK25 pKa = 10.89AYY27 pKa = 10.47LEE29 pKa = 4.12WFEE32 pKa = 4.61KK33 pKa = 9.95QAKK36 pKa = 5.67QTPVFIRR43 pKa = 11.84LAHH46 pKa = 5.47EE47 pKa = 4.52TGSHH51 pKa = 7.43DD52 pKa = 4.45EE53 pKa = 4.61GEE55 pKa = 4.05PDD57 pKa = 3.4YY58 pKa = 11.73DD59 pKa = 3.53HH60 pKa = 6.32THH62 pKa = 5.45VVFKK66 pKa = 10.48CKK68 pKa = 10.39SRR70 pKa = 11.84IDD72 pKa = 3.52TTSQRR77 pKa = 11.84FFDD80 pKa = 4.72FNAIHH85 pKa = 6.06PHH87 pKa = 5.17IKK89 pKa = 9.9VLKK92 pKa = 7.7TNKK95 pKa = 10.46SIDD98 pKa = 3.58DD99 pKa = 3.67AKK101 pKa = 11.08KK102 pKa = 10.78YY103 pKa = 9.13IAKK106 pKa = 9.67EE107 pKa = 4.0DD108 pKa = 3.86KK109 pKa = 10.91DD110 pKa = 4.45NEE112 pKa = 4.26DD113 pKa = 4.42LLVSDD118 pKa = 4.32TSNFIEE124 pKa = 5.0GVWSKK129 pKa = 9.28NTIQEE134 pKa = 4.06ALLDD138 pKa = 4.23FVKK141 pKa = 10.66KK142 pKa = 10.08PSDD145 pKa = 3.38VAGIIQLYY153 pKa = 8.88GLKK156 pKa = 10.41KK157 pKa = 10.56NPTQIHH163 pKa = 6.1EE164 pKa = 4.13EE165 pKa = 4.48DD166 pKa = 3.66IPRR169 pKa = 11.84HH170 pKa = 4.69AWQIALMKK178 pKa = 9.2EE179 pKa = 4.5TEE181 pKa = 4.22KK182 pKa = 11.07PPTKK186 pKa = 9.88KK187 pKa = 9.91QRR189 pKa = 11.84RR190 pKa = 11.84QIIWVVDD197 pKa = 3.67RR198 pKa = 11.84VGNTGKK204 pKa = 9.9SQLAKK209 pKa = 10.63YY210 pKa = 9.64MIMSDD215 pKa = 3.33PKK217 pKa = 10.49KK218 pKa = 9.99WFVCKK223 pKa = 10.55DD224 pKa = 3.18LGTSRR229 pKa = 11.84DD230 pKa = 3.44SSTIIQFAIAKK241 pKa = 8.34GWEE244 pKa = 4.01GHH246 pKa = 5.65GVIIDD251 pKa = 4.07LPRR254 pKa = 11.84SAEE257 pKa = 3.89NHH259 pKa = 5.88DD260 pKa = 3.55RR261 pKa = 11.84MYY263 pKa = 11.2SYY265 pKa = 10.66IEE267 pKa = 4.18EE268 pKa = 4.3IKK270 pKa = 11.0DD271 pKa = 3.85GFVTSQKK278 pKa = 10.42YY279 pKa = 8.68QGCTSTFNKK288 pKa = 9.18PHH290 pKa = 7.16LIVFANWEE298 pKa = 4.06PNYY301 pKa = 10.21TRR303 pKa = 11.84LSYY306 pKa = 10.83DD307 pKa = 2.55RR308 pKa = 11.84WDD310 pKa = 3.45MRR312 pKa = 11.84RR313 pKa = 11.84LEE315 pKa = 4.42VKK317 pKa = 10.4GKK319 pKa = 8.03TITMEE324 pKa = 4.08SFIPTILKK332 pKa = 10.09KK333 pKa = 10.46KK334 pKa = 8.79RR335 pKa = 11.84LEE337 pKa = 3.95YY338 pKa = 10.43HH339 pKa = 6.33AFDD342 pKa = 4.28YY343 pKa = 10.92QSQPDD348 pKa = 3.8EE349 pKa = 4.35DD350 pKa = 4.34HH351 pKa = 6.33LHH353 pKa = 6.89GYY355 pKa = 8.0ICKK358 pKa = 10.2EE359 pKa = 4.24LMDD362 pKa = 4.77DD363 pKa = 5.33LIGEE367 pKa = 4.31EE368 pKa = 4.64MLNEE372 pKa = 4.33HH373 pKa = 7.49DD374 pKa = 4.76PGCVDD379 pKa = 4.55EE380 pKa = 6.1IEE382 pKa = 4.52ATDD385 pKa = 4.44SEE387 pKa = 4.91VDD389 pKa = 3.76DD390 pKa = 5.02TPDD393 pKa = 3.45DD394 pKa = 4.05TPEE397 pKa = 3.9DD398 pKa = 3.97VYY400 pKa = 11.45DD401 pKa = 4.2IDD403 pKa = 5.95FDD405 pKa = 4.5DD406 pKa = 5.84LLVSDD411 pKa = 5.32DD412 pKa = 4.86LEE414 pKa = 4.19

Molecular weight: 48.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BPB1|A0A346BPB1_9VIRU Putative capsid protein OS=Fire ant associated circular virus 1 OX=2293280 PE=3 SV=1
MM1 pKa = 7.64SGRR4 pKa = 11.84KK5 pKa = 7.77KK6 pKa = 8.83TASAPAKK13 pKa = 9.93KK14 pKa = 9.88YY15 pKa = 9.7YY16 pKa = 10.11RR17 pKa = 11.84YY18 pKa = 9.78AARR21 pKa = 11.84RR22 pKa = 11.84PAVVTGSGDD31 pKa = 3.42YY32 pKa = 10.29KK33 pKa = 10.01VARR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.64QKK40 pKa = 10.8SSMRR44 pKa = 11.84YY45 pKa = 7.76PGAGKK50 pKa = 8.8TIGSAIGSVFGPAGSLVGGALGNLAHH76 pKa = 6.71SALHH80 pKa = 6.92AITGFGDD87 pKa = 3.2YY88 pKa = 9.91HH89 pKa = 6.65VKK91 pKa = 10.75HH92 pKa = 6.07NVLTEE97 pKa = 4.32TNGPPQVINQGKK109 pKa = 8.97EE110 pKa = 3.4FIIRR114 pKa = 11.84HH115 pKa = 5.5RR116 pKa = 11.84EE117 pKa = 3.96YY118 pKa = 9.71ITDD121 pKa = 3.86IYY123 pKa = 11.12SSAGTASTPSPFLNQIFPINPGQATTFPWLASLAGKK159 pKa = 9.87FEE161 pKa = 4.23QYY163 pKa = 10.31RR164 pKa = 11.84VDD166 pKa = 3.51GMVFEE171 pKa = 4.98FKK173 pKa = 10.5SLYY176 pKa = 10.09SDD178 pKa = 4.52AVVTQNGSIGSIILATEE195 pKa = 4.15YY196 pKa = 10.86NAGSAPFNSKK206 pKa = 7.77QQMEE210 pKa = 4.77NYY212 pKa = 9.8QFAQSCKK219 pKa = 8.25PSLSVLHH226 pKa = 6.76PIEE229 pKa = 4.4CARR232 pKa = 11.84NQTVLSEE239 pKa = 4.39LYY241 pKa = 9.85VRR243 pKa = 11.84PSAVPTGEE251 pKa = 4.7DD252 pKa = 2.67IKK254 pKa = 10.24TYY256 pKa = 11.43DD257 pKa = 3.44MGDD260 pKa = 3.52FQIASQGIPLGSAGAPVNLGEE281 pKa = 4.8LWVTYY286 pKa = 9.89QISLLKK292 pKa = 10.36PKK294 pKa = 10.03IPSVGPASYY303 pKa = 11.08VDD305 pKa = 4.0SGWSHH310 pKa = 7.1FNTNNLVSGSFTAATPFGPLGSLFPLPQNNILGITFTTNSMSIPLTSTPMRR361 pKa = 11.84YY362 pKa = 8.99MIDD365 pKa = 3.46LWWTGDD371 pKa = 3.57TNVAGWNAPATGTITNGLLINAQIMTGSYY400 pKa = 10.19LIPNVGGSATTIGASAKK417 pKa = 10.54YY418 pKa = 9.95FIEE421 pKa = 4.78CPAATGSLNTCLIPIQNNGGFPSATIRR448 pKa = 11.84RR449 pKa = 11.84MFSS452 pKa = 2.7

Molecular weight: 48.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

866

414

452

433.0

48.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.044 ± 1.606

1.039 ± 0.11

6.236 ± 2.716

4.965 ± 1.651

4.388 ± 0.026

7.275 ± 2.073

2.656 ± 0.791

7.275 ± 0.139

6.697 ± 1.94

6.813 ± 0.032

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.194 ± 0.013

4.503 ± 0.892

5.658 ± 1.015

3.926 ± 0.04

3.58 ± 0.187

7.852 ± 1.345

7.39 ± 0.41

4.965 ± 0.088

1.617 ± 0.207

3.926 ± 0.198
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski