Measles virus (strain Ichinose-B95a) (MeV) (Subacute sclerose panencephalitis virus)

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus

Average proteome isoelectric point is 6.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q786F2|HEMA_MEASC Hemagglutinin glycoprotein OS=Measles virus (strain Ichinose-B95a) OX=645098 GN=H PE=1 SV=1
MM1 pKa = 8.15AEE3 pKa = 3.63EE4 pKa = 3.91QARR7 pKa = 11.84HH8 pKa = 4.84VKK10 pKa = 10.61NGLEE14 pKa = 4.48CIRR17 pKa = 11.84ALKK20 pKa = 10.54AEE22 pKa = 5.1PIGSLAVEE30 pKa = 4.26EE31 pKa = 5.78AMAAWSEE38 pKa = 4.06ISDD41 pKa = 3.99NPGQDD46 pKa = 2.54RR47 pKa = 11.84ATCKK51 pKa = 10.55EE52 pKa = 4.09EE53 pKa = 3.89EE54 pKa = 4.39AGSSGLSKK62 pKa = 10.51PCLSAIGSTEE72 pKa = 3.52GGAPRR77 pKa = 11.84IRR79 pKa = 11.84GQGSGEE85 pKa = 4.09SDD87 pKa = 3.97DD88 pKa = 4.82DD89 pKa = 4.92AEE91 pKa = 4.47TLGIPSRR98 pKa = 11.84NLQASSTGLQCYY110 pKa = 8.88HH111 pKa = 7.22VYY113 pKa = 10.56DD114 pKa = 4.08HH115 pKa = 7.03SGEE118 pKa = 4.13AVKK121 pKa = 10.71GIQDD125 pKa = 3.6ADD127 pKa = 3.98SIMVQSGLDD136 pKa = 3.52GDD138 pKa = 4.4STLSGGDD145 pKa = 3.82DD146 pKa = 3.42EE147 pKa = 6.08SEE149 pKa = 4.18NSDD152 pKa = 3.3VDD154 pKa = 3.07IGEE157 pKa = 4.99PDD159 pKa = 3.41TEE161 pKa = 4.81GYY163 pKa = 10.86AITDD167 pKa = 3.66RR168 pKa = 11.84GSAPISMGFRR178 pKa = 11.84ASDD181 pKa = 3.44VEE183 pKa = 4.22TAEE186 pKa = 4.19GGEE189 pKa = 3.8IHH191 pKa = 7.05EE192 pKa = 4.42LLKK195 pKa = 10.95LQSRR199 pKa = 11.84GNNFPKK205 pKa = 10.39LGKK208 pKa = 7.92TLNVPPPPNPSRR220 pKa = 11.84ASTSEE225 pKa = 3.87TPIKK229 pKa = 9.98KK230 pKa = 8.95GHH232 pKa = 5.76RR233 pKa = 11.84RR234 pKa = 11.84EE235 pKa = 5.2IGLIWNGDD243 pKa = 3.23RR244 pKa = 11.84VFIDD248 pKa = 3.78RR249 pKa = 11.84WCNPMCSKK257 pKa = 9.47VTLGTIRR264 pKa = 11.84ARR266 pKa = 11.84CTCGEE271 pKa = 4.22CPRR274 pKa = 11.84VCEE277 pKa = 4.19QCRR280 pKa = 11.84TDD282 pKa = 3.22TGVDD286 pKa = 3.22TRR288 pKa = 11.84IWYY291 pKa = 9.3HH292 pKa = 5.99NLPEE296 pKa = 5.03IPEE299 pKa = 4.01

Molecular weight: 32.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q9YZN9|C_MEASC Protein C OS=Measles virus (strain Ichinose-B95a) OX=645098 GN=P/V/C PE=3 SV=1
MM1 pKa = 7.9SKK3 pKa = 9.54TDD5 pKa = 3.3WNASGLSRR13 pKa = 11.84PSPSAHH19 pKa = 5.55WPSRR23 pKa = 11.84KK24 pKa = 8.87PWQHH28 pKa = 3.85GQKK31 pKa = 10.26YY32 pKa = 7.23QTTQDD37 pKa = 3.16RR38 pKa = 11.84TEE40 pKa = 3.99PPARR44 pKa = 11.84KK45 pKa = 8.91RR46 pKa = 11.84RR47 pKa = 11.84QAVRR51 pKa = 11.84VSANHH56 pKa = 7.14ASQQLDD62 pKa = 3.29QLKK65 pKa = 10.12AVHH68 pKa = 6.38LASAVRR74 pKa = 11.84DD75 pKa = 3.67LEE77 pKa = 4.53KK78 pKa = 11.26AMTTLKK84 pKa = 10.47LWEE87 pKa = 4.53SPQEE91 pKa = 4.11ISRR94 pKa = 11.84HH95 pKa = 4.01QALGYY100 pKa = 9.1SVIMFMITAVKK111 pKa = 10.1RR112 pKa = 11.84LRR114 pKa = 11.84EE115 pKa = 4.28SKK117 pKa = 10.12MLTLSWFNQALMVIAPSQEE136 pKa = 3.32EE137 pKa = 4.5TMNLKK142 pKa = 8.49TAMWILANLIPRR154 pKa = 11.84DD155 pKa = 4.0MLSLTGDD162 pKa = 4.77LLPSLWGSGLLMLKK176 pKa = 9.76LQKK179 pKa = 10.13EE180 pKa = 4.71GRR182 pKa = 11.84STSSS186 pKa = 2.66

Molecular weight: 21.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

5202

186

2183

650.3

72.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.209 ± 0.579

1.788 ± 0.307

5.536 ± 0.429

5.709 ± 0.482

3.114 ± 0.529

7.017 ± 0.766

2.345 ± 0.46

7.132 ± 0.422

4.998 ± 0.347

10.554 ± 0.468

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.499 ± 0.178

4.191 ± 0.289

4.748 ± 0.349

3.479 ± 0.378

6.075 ± 0.335

8.612 ± 0.505

5.498 ± 0.12

6.19 ± 0.521

1.096 ± 0.186

3.21 ± 0.493
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski