Panteoa phage Kyle

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Kylevirus; Panteoa virus Kyle

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 106 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A514A8I2|A0A514A8I2_9CAUD Uncharacterized protein OS=Panteoa phage Kyle OX=2589665 GN=42 PE=4 SV=1
MM1 pKa = 7.67AKK3 pKa = 9.02LTATEE8 pKa = 4.34LANASAFFAGEE19 pKa = 3.98YY20 pKa = 10.14VPYY23 pKa = 10.85ASLLAANVGVKK34 pKa = 9.67IGEE37 pKa = 4.34EE38 pKa = 3.73IPAEE42 pKa = 4.15VVGDD46 pKa = 3.82FGFDD50 pKa = 3.78DD51 pKa = 4.2EE52 pKa = 4.77EE53 pKa = 4.67GAYY56 pKa = 10.64LDD58 pKa = 4.06TVDD61 pKa = 3.46GRR63 pKa = 11.84EE64 pKa = 3.63IRR66 pKa = 11.84VIEE69 pKa = 4.16TEE71 pKa = 4.43LYY73 pKa = 9.91VAAEE77 pKa = 4.17DD78 pKa = 3.99VATGEE83 pKa = 4.27VAFFALEE90 pKa = 4.29EE91 pKa = 4.1IEE93 pKa = 4.28EE94 pKa = 4.21

Molecular weight: 10.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A514A8P6|A0A514A8P6_9CAUD Uncharacterized protein OS=Panteoa phage Kyle OX=2589665 GN=20 PE=4 SV=1
MM1 pKa = 6.92AAKK4 pKa = 10.09RR5 pKa = 11.84RR6 pKa = 11.84FRR8 pKa = 11.84LMRR11 pKa = 11.84IGNILPGTRR20 pKa = 11.84FWFVYY25 pKa = 9.33GKK27 pKa = 10.05KK28 pKa = 9.96RR29 pKa = 11.84PGTLIWLNKK38 pKa = 9.7KK39 pKa = 9.69NVACYY44 pKa = 10.23HH45 pKa = 6.59IGHH48 pKa = 6.41SFNVKK53 pKa = 9.53ARR55 pKa = 11.84RR56 pKa = 11.84FTIGAWCQVWVEE68 pKa = 3.83IPDD71 pKa = 4.0YY72 pKa = 10.53EE73 pKa = 4.27KK74 pKa = 10.88HH75 pKa = 5.77

Molecular weight: 8.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

106

0

106

21707

37

1003

204.8

22.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.942 ± 0.283

0.912 ± 0.077

5.855 ± 0.151

6.8 ± 0.324

4.229 ± 0.138

7.159 ± 0.233

1.829 ± 0.141

5.901 ± 0.18

6.408 ± 0.28

7.638 ± 0.232

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.847 ± 0.102

4.915 ± 0.223

3.884 ± 0.142

3.962 ± 0.174

5.215 ± 0.203

6.159 ± 0.219

5.823 ± 0.213

7.039 ± 0.249

1.354 ± 0.097

3.128 ± 0.142
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski