Fly associated circular virus 2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; unclassified Genomoviridae

Average proteome isoelectric point is 8.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BP61|A0A346BP61_9VIRU Putative capsid protein OS=Fly associated circular virus 2 OX=2293282 PE=4 SV=1
MM1 pKa = 7.83SSFRR5 pKa = 11.84FQARR9 pKa = 11.84YY10 pKa = 10.11GLFTYY15 pKa = 7.58SQCGRR20 pKa = 11.84LRR22 pKa = 11.84PQQVSEE28 pKa = 4.48HH29 pKa = 5.12FTSLGADD36 pKa = 3.66HH37 pKa = 7.29IIGRR41 pKa = 11.84EE42 pKa = 3.79THH44 pKa = 5.99QDD46 pKa = 3.12GGTHH50 pKa = 5.9LHH52 pKa = 5.88VFADD56 pKa = 4.56FRR58 pKa = 11.84RR59 pKa = 11.84KK60 pKa = 9.94YY61 pKa = 9.02RR62 pKa = 11.84TRR64 pKa = 11.84DD65 pKa = 3.02NRR67 pKa = 11.84KK68 pKa = 8.04FDD70 pKa = 3.6VEE72 pKa = 4.33GFHH75 pKa = 6.93PNIVPSLRR83 pKa = 11.84NPAGGWDD90 pKa = 3.84YY91 pKa = 10.92ATKK94 pKa = 10.83DD95 pKa = 3.2GDD97 pKa = 3.43ICAGEE102 pKa = 4.27LSRR105 pKa = 11.84PDD107 pKa = 3.67DD108 pKa = 3.77EE109 pKa = 5.43RR110 pKa = 11.84GSRR113 pKa = 11.84SRR115 pKa = 11.84TADD118 pKa = 3.51AGWDD122 pKa = 3.45ALRR125 pKa = 11.84AAEE128 pKa = 4.19TRR130 pKa = 11.84DD131 pKa = 3.33DD132 pKa = 3.96FFRR135 pKa = 11.84IASEE139 pKa = 4.06HH140 pKa = 6.19LFSHH144 pKa = 6.53LVKK147 pKa = 10.71SFNSFSAYY155 pKa = 10.37ADD157 pKa = 2.82WKK159 pKa = 10.51FRR161 pKa = 11.84VDD163 pKa = 3.55RR164 pKa = 11.84TPYY167 pKa = 9.52IHH169 pKa = 7.59DD170 pKa = 4.32PNVTFDD176 pKa = 4.76LGQLHH181 pKa = 6.29QLRR184 pKa = 11.84EE185 pKa = 4.47WIRR188 pKa = 11.84GNLPPGNNRR197 pKa = 11.84AFGEE201 pKa = 4.17RR202 pKa = 11.84GISLLLWGRR211 pKa = 11.84SRR213 pKa = 11.84TGKK216 pKa = 7.69TWLARR221 pKa = 11.84SFGSHH226 pKa = 6.83CYY228 pKa = 10.22FGGLFALDD236 pKa = 3.44EE237 pKa = 4.33YY238 pKa = 11.04EE239 pKa = 4.67YY240 pKa = 11.33NDD242 pKa = 3.63KK243 pKa = 10.87VDD245 pKa = 3.48YY246 pKa = 11.18AVFDD250 pKa = 5.21DD251 pKa = 3.75IQGGFKK257 pKa = 10.57YY258 pKa = 10.42FPAYY262 pKa = 9.71KK263 pKa = 9.97SWLGQQAEE271 pKa = 5.02FYY273 pKa = 9.88CTDD276 pKa = 3.05KK277 pKa = 10.79FRR279 pKa = 11.84KK280 pKa = 9.1KK281 pKa = 10.52KK282 pKa = 8.41YY283 pKa = 9.24IKK285 pKa = 9.54WGRR288 pKa = 11.84PCIWIMNEE296 pKa = 3.73DD297 pKa = 4.63PYY299 pKa = 10.22TQEE302 pKa = 5.17VDD304 pKa = 3.45IDD306 pKa = 3.78WLEE309 pKa = 4.06KK310 pKa = 10.45NCLIVHH316 pKa = 7.01IDD318 pKa = 3.45RR319 pKa = 11.84PLYY322 pKa = 8.64QTAA325 pKa = 3.5

Molecular weight: 37.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BP61|A0A346BP61_9VIRU Putative capsid protein OS=Fly associated circular virus 2 OX=2293282 PE=4 SV=1
MM1 pKa = 8.02AYY3 pKa = 10.14RR4 pKa = 11.84FRR6 pKa = 11.84RR7 pKa = 11.84FSTRR11 pKa = 11.84SRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84FTPRR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84SSFRR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84NYY29 pKa = 10.64RR30 pKa = 11.84MIRR33 pKa = 11.84RR34 pKa = 11.84PRR36 pKa = 11.84RR37 pKa = 11.84FSRR40 pKa = 11.84PRR42 pKa = 11.84TNVRR46 pKa = 11.84RR47 pKa = 11.84VRR49 pKa = 11.84NLASRR54 pKa = 11.84KK55 pKa = 9.61CRR57 pKa = 11.84DD58 pKa = 3.33NMLSNPIDD66 pKa = 3.78DD67 pKa = 4.48TGSPTTPGPVTMTGGNTYY85 pKa = 11.14AFIFSPSARR94 pKa = 11.84VAGHH98 pKa = 6.88EE99 pKa = 4.08ISSGDD104 pKa = 3.51RR105 pKa = 11.84VNQPSSSQRR114 pKa = 11.84RR115 pKa = 11.84KK116 pKa = 9.89SKK118 pKa = 10.77CFVSGYY124 pKa = 10.74GEE126 pKa = 4.28TIEE129 pKa = 4.85IQTDD133 pKa = 3.75DD134 pKa = 3.46ASPWVWRR141 pKa = 11.84RR142 pKa = 11.84IVFSTIGLAVQFQPGLLYY160 pKa = 11.26NNDD163 pKa = 3.23DD164 pKa = 3.33TRR166 pKa = 11.84GYY168 pKa = 11.15EE169 pKa = 3.61RR170 pKa = 11.84TTFNLASGTAQADD183 pKa = 3.51QLQGIVYY190 pKa = 9.62RR191 pKa = 11.84YY192 pKa = 9.63LFQGSQDD199 pKa = 3.39IDD201 pKa = 3.3WANVMTANTAPRR213 pKa = 11.84HH214 pKa = 4.91VKK216 pKa = 9.99VYY218 pKa = 9.32SDD220 pKa = 3.57RR221 pKa = 11.84RR222 pKa = 11.84RR223 pKa = 11.84VIQSPNSEE231 pKa = 3.95GGTIRR236 pKa = 11.84ISKK239 pKa = 9.9HH240 pKa = 4.87YY241 pKa = 10.53DD242 pKa = 3.08SIRR245 pKa = 11.84RR246 pKa = 11.84SIIYY250 pKa = 10.14DD251 pKa = 4.07DD252 pKa = 4.12IEE254 pKa = 5.7AGSGAKK260 pKa = 8.39ATNAIASGTPYY271 pKa = 11.37GNMGDD276 pKa = 4.24LFVMDD281 pKa = 5.11FFSSASDD288 pKa = 4.04DD289 pKa = 3.89EE290 pKa = 4.71TSGATFQPHH299 pKa = 4.72GRR301 pKa = 11.84YY302 pKa = 8.68YY303 pKa = 8.44WHH305 pKa = 7.46EE306 pKa = 4.17GQAVV310 pKa = 3.08

Molecular weight: 35.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

635

310

325

317.5

36.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.614 ± 0.112

1.26 ± 0.429

7.402 ± 0.888

3.622 ± 0.726

6.299 ± 0.794

8.031 ± 0.202

2.677 ± 0.742

5.197 ± 0.425

3.307 ± 0.957

5.039 ± 1.49

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.417 ± 0.586

4.094 ± 0.519

4.409 ± 0.299

3.937 ± 0.179

11.339 ± 1.541

8.189 ± 1.713

5.984 ± 1.001

4.252 ± 0.634

2.205 ± 0.638

4.724 ± 0.145
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski