Amino acid dipepetide frequency for Magnaporthiopsis poae (strain ATCC 64411 / 73-15) (Kentucky bluegrass fungus) (Magnaporthe poae)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10^-3.

For more information see sequence space article on Wikipedia.

	Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Pro	Gln	Arg	Ser	Thr	Val	Trp	Tyr	Xaa
Ala	13.35AlaAla: 13.35 ± 0.087	1.272AlaCys: 1.272 ± 0.017	5.121AlaAsp: 5.121 ± 0.041	5.639AlaGlu: 5.639 ± 0.048	3.095AlaPhe: 3.095 ± 0.027	7.367AlaGly: 7.367 ± 0.043	1.951AlaHis: 1.951 ± 0.021	3.857AlaIle: 3.857 ± 0.036	4.244AlaLys: 4.244 ± 0.038	8.071AlaLeu: 8.071 ± 0.053	2.203AlaMet: 2.203 ± 0.022	2.849AlaAsn: 2.849 ± 0.025	6.079AlaPro: 6.079 ± 0.057	3.639AlaGln: 3.639 ± 0.038	6.27AlaArg: 6.27 ± 0.041	8.159AlaSer: 8.159 ± 0.055	5.934AlaThr: 5.934 ± 0.043	6.446AlaVal: 6.446 ± 0.041	1.289AlaTrp: 1.289 ± 0.017	2.0AlaTyr: 2.0 ± 0.02	0.0AlaXaa: 0.0 ± 0.0
Cys	1.08CysAla: 1.08 ± 0.015	0.348CysCys: 0.348 ± 0.011	0.676CysAsp: 0.676 ± 0.014	0.607CysGlu: 0.607 ± 0.012	0.553CysPhe: 0.553 ± 0.012	1.087CysGly: 1.087 ± 0.019	0.385CysHis: 0.385 ± 0.01	0.626CysIle: 0.626 ± 0.01	0.504CysLys: 0.504 ± 0.011	1.352CysLeu: 1.352 ± 0.02	0.275CysMet: 0.275 ± 0.007	0.43CysAsn: 0.43 ± 0.012	0.836CysPro: 0.836 ± 0.016	0.481CysGln: 0.481 ± 0.01	1.01CysArg: 1.01 ± 0.014	1.009CysSer: 1.009 ± 0.016	0.701CysThr: 0.701 ± 0.011	0.854CysVal: 0.854 ± 0.015	0.252CysTrp: 0.252 ± 0.008	0.342CysTyr: 0.342 ± 0.008	0.0CysXaa: 0.0 ± 0.0
Asp	5.359AspAla: 5.359 ± 0.043	0.686AspCys: 0.686 ± 0.014	4.889AspAsp: 4.889 ± 0.053	4.361AspGlu: 4.361 ± 0.039	2.029AspPhe: 2.029 ± 0.025	4.972AspGly: 4.972 ± 0.039	1.223AspHis: 1.223 ± 0.016	2.447AspIle: 2.447 ± 0.024	2.421AspLys: 2.421 ± 0.022	4.756AspLeu: 4.756 ± 0.036	1.319AspMet: 1.319 ± 0.019	1.648AspAsn: 1.648 ± 0.022	3.461AspPro: 3.461 ± 0.029	1.828AspGln: 1.828 ± 0.023	3.454AspArg: 3.454 ± 0.044	3.915AspSer: 3.915 ± 0.034	2.636AspThr: 2.636 ± 0.024	3.787AspVal: 3.787 ± 0.033	0.892AspTrp: 0.892 ± 0.014	1.402AspTyr: 1.402 ± 0.018	0.0AspXaa: 0.0 ± 0.0
Glu	5.869GluAla: 5.869 ± 0.047	0.629GluCys: 0.629 ± 0.013	3.957GluAsp: 3.957 ± 0.041	4.671GluGlu: 4.671 ± 0.045	1.716GluPhe: 1.716 ± 0.021	3.66GluGly: 3.66 ± 0.029	1.3GluHis: 1.3 ± 0.016	2.46GluIle: 2.46 ± 0.025	3.082GluLys: 3.082 ± 0.033	5.013GluLeu: 5.013 ± 0.041	1.386GluMet: 1.386 ± 0.018	1.82GluAsn: 1.82 ± 0.022	2.991GluPro: 2.991 ± 0.036	2.279GluGln: 2.279 ± 0.027	3.994GluArg: 3.994 ± 0.039	3.72GluSer: 3.72 ± 0.034	3.143GluThr: 3.143 ± 0.029	3.342GluVal: 3.342 ± 0.031	0.816GluTrp: 0.816 ± 0.014	1.394GluTyr: 1.394 ± 0.018	0.0GluXaa: 0.0 ± 0.0
Phe	3.064PheAla: 3.064 ± 0.027	0.574PheCys: 0.574 ± 0.012	2.123PheAsp: 2.123 ± 0.021	1.893PheGlu: 1.893 ± 0.021	1.601PhePhe: 1.601 ± 0.023	2.764PheGly: 2.764 ± 0.029	0.794PheHis: 0.794 ± 0.014	1.431PheIle: 1.431 ± 0.017	1.307PheLys: 1.307 ± 0.019	3.222PheLeu: 3.222 ± 0.03	0.718PheMet: 0.718 ± 0.013	1.204PheAsn: 1.204 ± 0.018	1.937PhePro: 1.937 ± 0.023	1.197PheGln: 1.197 ± 0.014	2.101PheArg: 2.101 ± 0.021	2.701PheSer: 2.701 ± 0.025	1.871PheThr: 1.871 ± 0.021	2.372PheVal: 2.372 ± 0.023	0.611PheTrp: 0.611 ± 0.011	0.962PheTyr: 0.962 ± 0.013	0.0PheXaa: 0.0 ± 0.0
Gly	6.692GlyAla: 6.692 ± 0.047	1.046GlyCys: 1.046 ± 0.018	4.233GlyAsp: 4.233 ± 0.031	3.689GlyGlu: 3.689 ± 0.03	2.735GlyPhe: 2.735 ± 0.029	8.095GlyGly: 8.095 ± 0.075	1.895GlyHis: 1.895 ± 0.022	3.146GlyIle: 3.146 ± 0.028	3.382GlyLys: 3.382 ± 0.037	6.26GlyLeu: 6.26 ± 0.04	1.629GlyMet: 1.629 ± 0.02	2.566GlyAsn: 2.566 ± 0.032	4.209GlyPro: 4.209 ± 0.037	2.773GlyGln: 2.773 ± 0.031	5.322GlyArg: 5.322 ± 0.042	6.515GlySer: 6.515 ± 0.048	4.204GlyThr: 4.204 ± 0.034	4.658GlyVal: 4.658 ± 0.037	1.253GlyTrp: 1.253 ± 0.018	1.951GlyTyr: 1.951 ± 0.024	0.0GlyXaa: 0.0 ± 0.0
His	1.994HisAla: 1.994 ± 0.022	0.357HisCys: 0.357 ± 0.009	1.331HisAsp: 1.331 ± 0.017	1.238HisGlu: 1.238 ± 0.017	0.84HisPhe: 0.84 ± 0.013	1.94HisGly: 1.94 ± 0.022	1.059HisHis: 1.059 ± 0.021	1.038HisIle: 1.038 ± 0.015	0.883HisLys: 0.883 ± 0.014	2.157HisLeu: 2.157 ± 0.023	0.543HisMet: 0.543 ± 0.011	0.736HisAsn: 0.736 ± 0.012	1.764HisPro: 1.764 ± 0.023	1.121HisGln: 1.121 ± 0.022	1.73HisArg: 1.73 ± 0.022	1.721HisSer: 1.721 ± 0.026	1.207HisThr: 1.207 ± 0.016	1.481HisVal: 1.481 ± 0.019	0.343HisTrp: 0.343 ± 0.008	0.644HisTyr: 0.644 ± 0.011	0.0HisXaa: 0.0 ± 0.0
Ile	3.587IleAla: 3.587 ± 0.031	0.671IleCys: 0.671 ± 0.013	2.367IleAsp: 2.367 ± 0.023	2.294IleGlu: 2.294 ± 0.022	1.599IlePhe: 1.599 ± 0.021	2.695IleGly: 2.695 ± 0.027	1.009IleHis: 1.009 ± 0.016	1.919IleIle: 1.919 ± 0.037	1.868IleLys: 1.868 ± 0.022	3.723IleLeu: 3.723 ± 0.039	0.95IleMet: 0.95 ± 0.015	1.438IleAsn: 1.438 ± 0.017	2.59IlePro: 2.59 ± 0.024	1.514IleGln: 1.514 ± 0.018	2.595IleArg: 2.595 ± 0.028	3.095IleSer: 3.095 ± 0.025	2.333IleThr: 2.333 ± 0.025	2.728IleVal: 2.728 ± 0.029	0.637IleTrp: 0.637 ± 0.012	1.113IleTyr: 1.113 ± 0.017	0.0IleXaa: 0.0 ± 0.0
Lys	4.32LysAla: 4.32 ± 0.038	0.49LysCys: 0.49 ± 0.011	2.529LysAsp: 2.529 ± 0.025	2.848LysGlu: 2.848 ± 0.036	1.252LysPhe: 1.252 ± 0.016	2.956LysGly: 2.956 ± 0.031	1.038LysHis: 1.038 ± 0.014	1.822LysIle: 1.822 ± 0.023	3.156LysLys: 3.156 ± 0.045	3.643LysLeu: 3.643 ± 0.029	0.989LysMet: 0.989 ± 0.016	1.45LysAsn: 1.45 ± 0.021	2.768LysPro: 2.768 ± 0.031	1.672LysGln: 1.672 ± 0.019	3.266LysArg: 3.266 ± 0.031	2.979LysSer: 2.979 ± 0.028	2.634LysThr: 2.634 ± 0.024	2.491LysVal: 2.491 ± 0.024	0.578LysTrp: 0.578 ± 0.011	1.085LysTyr: 1.085 ± 0.016	0.0LysXaa: 0.0 ± 0.0
Leu	8.779LeuAla: 8.779 ± 0.05	1.291LeuCys: 1.291 ± 0.019	5.127LeuAsp: 5.127 ± 0.04	5.119LeuGlu: 5.119 ± 0.038	3.077LeuPhe: 3.077 ± 0.03	6.299LeuGly: 6.299 ± 0.046	2.1LeuHis: 2.1 ± 0.019	3.165LeuIle: 3.165 ± 0.033	3.597LeuLys: 3.597 ± 0.033	8.294LeuLeu: 8.294 ± 0.067	1.7LeuMet: 1.7 ± 0.022	2.582LeuAsn: 2.582 ± 0.024	5.717LeuPro: 5.717 ± 0.042	3.477LeuGln: 3.477 ± 0.031	6.154LeuArg: 6.154 ± 0.042	6.731LeuSer: 6.731 ± 0.036	4.319LeuThr: 4.319 ± 0.035	5.656LeuVal: 5.656 ± 0.04	1.233LeuTrp: 1.233 ± 0.019	2.084LeuTyr: 2.084 ± 0.02	0.0LeuXaa: 0.0 ± 0.0
Met	2.534MetAla: 2.534 ± 0.024	0.252MetCys: 0.252 ± 0.007	1.27MetAsp: 1.27 ± 0.015	1.234MetGlu: 1.234 ± 0.016	0.714MetPhe: 0.714 ± 0.013	1.522MetGly: 1.522 ± 0.022	0.511MetHis: 0.511 ± 0.011	0.816MetIle: 0.816 ± 0.013	0.804MetLys: 0.804 ± 0.014	1.892MetLeu: 1.892 ± 0.02	0.574MetMet: 0.574 ± 0.013	0.632MetAsn: 0.632 ± 0.014	1.432MetPro: 1.432 ± 0.018	0.847MetGln: 0.847 ± 0.014	1.445MetArg: 1.445 ± 0.017	1.808MetSer: 1.808 ± 0.019	1.253MetThr: 1.253 ± 0.015	1.355MetVal: 1.355 ± 0.018	0.275MetTrp: 0.275 ± 0.008	0.485MetTyr: 0.485 ± 0.01	0.0MetXaa: 0.0 ± 0.0
Asn	2.768AsnAla: 2.768 ± 0.025	0.414AsnCys: 0.414 ± 0.01	1.699AsnAsp: 1.699 ± 0.018	1.562AsnGlu: 1.562 ± 0.02	1.156AsnPhe: 1.156 ± 0.017	2.948AsnGly: 2.948 ± 0.038	0.772AsnHis: 0.772 ± 0.014	1.52AsnIle: 1.52 ± 0.018	1.399AsnLys: 1.399 ± 0.018	2.711AsnLeu: 2.711 ± 0.025	0.778AsnMet: 0.778 ± 0.014	1.42AsnAsn: 1.42 ± 0.031	2.267AsnPro: 2.267 ± 0.021	1.138AsnGln: 1.138 ± 0.018	1.867AsnArg: 1.867 ± 0.023	2.318AsnSer: 2.318 ± 0.028	1.785AsnThr: 1.785 ± 0.021	1.984AsnVal: 1.984 ± 0.022	0.472AsnTrp: 0.472 ± 0.01	0.84AsnTyr: 0.84 ± 0.013	0.0AsnXaa: 0.0 ± 0.0
Pro	7.093ProAla: 7.093 ± 0.056	0.684ProCys: 0.684 ± 0.014	3.522ProAsp: 3.522 ± 0.028	3.772ProGlu: 3.772 ± 0.035	2.012ProPhe: 2.012 ± 0.023	5.058ProGly: 5.058 ± 0.042	1.428ProHis: 1.428 ± 0.019	2.267ProIle: 2.267 ± 0.023	2.581ProLys: 2.581 ± 0.026	4.979ProLeu: 4.979 ± 0.037	1.168ProMet: 1.168 ± 0.018	1.99ProAsn: 1.99 ± 0.022	6.516ProPro: 6.516 ± 0.066	2.673ProGln: 2.673 ± 0.039	4.394ProArg: 4.394 ± 0.037	6.377ProSer: 6.377 ± 0.059	4.115ProThr: 4.115 ± 0.037	3.892ProVal: 3.892 ± 0.027	0.842ProTrp: 0.842 ± 0.015	1.385ProTyr: 1.385 ± 0.018	0.0ProXaa: 0.0 ± 0.0
Gln	3.77GlnAla: 3.77 ± 0.04	0.445GlnCys: 0.445 ± 0.011	1.966GlnAsp: 1.966 ± 0.02	2.173GlnGlu: 2.173 ± 0.026	1.116GlnPhe: 1.116 ± 0.017	2.588GlnGly: 2.588 ± 0.031	1.206GlnHis: 1.206 ± 0.022	1.518GlnIle: 1.518 ± 0.021	1.731GlnLys: 1.731 ± 0.022	3.329GlnLeu: 3.329 ± 0.027	0.862GlnMet: 0.862 ± 0.016	1.274GlnAsn: 1.274 ± 0.018	2.96GlnPro: 2.96 ± 0.039	3.544GlnGln: 3.544 ± 0.088	2.733GlnArg: 2.733 ± 0.027	2.755GlnSer: 2.755 ± 0.025	2.189GlnThr: 2.189 ± 0.024	2.098GlnVal: 2.098 ± 0.025	0.535GlnTrp: 0.535 ± 0.011	0.969GlnTyr: 0.969 ± 0.015	0.0GlnXaa: 0.0 ± 0.0
Arg	5.866ArgAla: 5.866 ± 0.042	0.928ArgCys: 0.928 ± 0.014	3.896ArgAsp: 3.896 ± 0.042	3.956ArgGlu: 3.956 ± 0.037	2.289ArgPhe: 2.289 ± 0.021	4.666ArgGly: 4.666 ± 0.038	1.937ArgHis: 1.937 ± 0.019	2.766ArgIle: 2.766 ± 0.028	3.25ArgLys: 3.25 ± 0.035	6.216ArgLeu: 6.216 ± 0.046	1.449ArgMet: 1.449 ± 0.019	2.156ArgAsn: 2.156 ± 0.022	4.617ArgPro: 4.617 ± 0.039	2.969ArgGln: 2.969 ± 0.027	6.661ArgArg: 6.661 ± 0.054	5.161ArgSer: 5.161 ± 0.039	3.517ArgThr: 3.517 ± 0.034	3.741ArgVal: 3.741 ± 0.031	1.063ArgTrp: 1.063 ± 0.016	1.634ArgTyr: 1.634 ± 0.018	0.0ArgXaa: 0.0 ± 0.0
Ser	7.318SerAla: 7.318 ± 0.049	0.979SerCys: 0.979 ± 0.015	3.959SerAsp: 3.959 ± 0.033	3.624SerGlu: 3.624 ± 0.034	2.748SerPhe: 2.748 ± 0.026	6.169SerGly: 6.169 ± 0.044	1.891SerHis: 1.891 ± 0.023	3.248SerIle: 3.248 ± 0.025	3.144SerLys: 3.144 ± 0.03	6.827SerLeu: 6.827 ± 0.042	1.671SerMet: 1.671 ± 0.018	2.453SerAsn: 2.453 ± 0.027	6.089SerPro: 6.089 ± 0.056	2.978SerGln: 2.978 ± 0.027	5.635SerArg: 5.635 ± 0.053	8.813SerSer: 8.813 ± 0.089	5.123SerThr: 5.123 ± 0.045	4.491SerVal: 4.491 ± 0.033	1.168SerTrp: 1.168 ± 0.018	1.76SerTyr: 1.76 ± 0.018	0.0SerXaa: 0.0 ± 0.0
Thr	5.932ThrAla: 5.932 ± 0.041	0.784ThrCys: 0.784 ± 0.014	2.628ThrAsp: 2.628 ± 0.025	2.748ThrGlu: 2.748 ± 0.028	1.949ThrPhe: 1.949 ± 0.021	4.232ThrGly: 4.232 ± 0.035	1.198ThrHis: 1.198 ± 0.016	2.457ThrIle: 2.457 ± 0.025	2.349ThrLys: 2.349 ± 0.022	4.737ThrLeu: 4.737 ± 0.034	1.175ThrMet: 1.175 ± 0.016	1.786ThrAsn: 1.786 ± 0.022	4.472ThrPro: 4.472 ± 0.038	1.912ThrGln: 1.912 ± 0.024	3.459ThrArg: 3.459 ± 0.025	4.965ThrSer: 4.965 ± 0.05	4.409ThrThr: 4.409 ± 0.056	3.668ThrVal: 3.668 ± 0.037	0.816ThrTrp: 0.816 ± 0.013	1.379ThrTyr: 1.379 ± 0.017	0.0ThrXaa: 0.0 ± 0.0
Val	6.224ValAla: 6.224 ± 0.043	0.951ValCys: 0.951 ± 0.013	3.773ValAsp: 3.773 ± 0.033	3.695ValGlu: 3.695 ± 0.027	2.419ValPhe: 2.419 ± 0.023	4.321ValGly: 4.321 ± 0.033	1.37ValHis: 1.37 ± 0.018	2.471ValIle: 2.471 ± 0.026	2.639ValLys: 2.639 ± 0.028	5.665ValLeu: 5.665 ± 0.039	1.337ValMet: 1.337 ± 0.018	1.938ValAsn: 1.938 ± 0.021	3.962ValPro: 3.962 ± 0.03	2.212ValGln: 2.212 ± 0.026	3.923ValArg: 3.923 ± 0.032	4.566ValSer: 4.566 ± 0.038	3.438ValThr: 3.438 ± 0.037	4.73ValVal: 4.73 ± 0.035	0.945ValTrp: 0.945 ± 0.014	1.616ValTyr: 1.616 ± 0.018	0.0ValXaa: 0.0 ± 0.0
Trp	1.284TrpAla: 1.284 ± 0.017	0.221TrpCys: 0.221 ± 0.006	0.932TrpAsp: 0.932 ± 0.015	0.825TrpGlu: 0.825 ± 0.014	0.518TrpPhe: 0.518 ± 0.01	0.978TrpGly: 0.978 ± 0.015	0.382TrpHis: 0.382 ± 0.009	0.67TrpIle: 0.67 ± 0.012	0.69TrpLys: 0.69 ± 0.011	1.397TrpLeu: 1.397 ± 0.019	0.353TrpMet: 0.353 ± 0.008	0.551TrpAsn: 0.551 ± 0.012	0.721TrpPro: 0.721 ± 0.013	0.535TrpGln: 0.535 ± 0.01	1.134TrpArg: 1.134 ± 0.017	1.041TrpSer: 1.041 ± 0.015	0.912TrpThr: 0.912 ± 0.015	0.896TrpVal: 0.896 ± 0.015	0.286TrpTrp: 0.286 ± 0.008	0.38TrpTyr: 0.38 ± 0.009	0.0TrpXaa: 0.0 ± 0.0
Tyr	1.955TyrAla: 1.955 ± 0.022	0.387TyrCys: 0.387 ± 0.01	1.481TyrAsp: 1.481 ± 0.018	1.294TyrGlu: 1.294 ± 0.019	1.028TyrPhe: 1.028 ± 0.016	1.934TyrGly: 1.934 ± 0.023	0.678TyrHis: 0.678 ± 0.012	1.079TyrIle: 1.079 ± 0.017	0.937TyrLys: 0.937 ± 0.015	2.261TyrLeu: 2.261 ± 0.024	0.576TyrMet: 0.576 ± 0.011	0.895TyrAsn: 0.895 ± 0.015	1.36TyrPro: 1.36 ± 0.02	0.968TyrGln: 0.968 ± 0.016	1.591TyrArg: 1.591 ± 0.018	1.742TyrSer: 1.742 ± 0.022	1.33TyrThr: 1.33 ± 0.015	1.527TyrVal: 1.527 ± 0.016	0.402TyrTrp: 0.402 ± 0.009	0.814TyrTyr: 0.814 ± 0.014	0.0TyrXaa: 0.0 ± 0.0
Xaa	0.0XaaAla: 0.0 ± 0.0	0.0XaaCys: 0.0 ± 0.0	0.0XaaAsp: 0.0 ± 0.0	0.0XaaGlu: 0.0 ± 0.0	0.0XaaPhe: 0.0 ± 0.0	0.0XaaGly: 0.0 ± 0.0	0.0XaaHis: 0.0 ± 0.0	0.0XaaIle: 0.0 ± 0.0	0.0XaaLys: 0.0 ± 0.0	0.0XaaLeu: 0.0 ± 0.0	0.0XaaMet: 0.0 ± 0.0	0.0XaaAsn: 0.0 ± 0.0	0.0XaaPro: 0.0 ± 0.0	0.0XaaGln: 0.0 ± 0.0	0.0XaaArg: 0.0 ± 0.0	0.0XaaSer: 0.0 ± 0.0	0.0XaaThr: 0.0 ± 0.0	0.0XaaVal: 0.0 ± 0.0	0.0XaaTrp: 0.0 ± 0.0	0.0XaaTyr: 0.0 ± 0.0	0.0XaaXaa: 0.0 ± 0.0

Statistics based on 11303 proteins (4899822 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944

Contact: Lukasz P. Kozlowski

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