Hyalangium minutum

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Myxococcales; Cystobacterineae; Archangiaceae; Hyalangium

Average proteome isoelectric point is 6.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8967 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A085VZS1|A0A085VZS1_9DELT Chromosome partition protein smc OS=Hyalangium minutum OX=394096 GN=DB31_4558 PE=4 SV=1
MM1 pKa = 7.52RR2 pKa = 11.84RR3 pKa = 11.84SSSSSRR9 pKa = 11.84ISAVCSSLLAALGLLLSAPASAQWTPGTALPHH41 pKa = 6.18AHH43 pKa = 5.55TQGVIIPDD51 pKa = 3.28ATSRR55 pKa = 11.84IHH57 pKa = 7.3AIGGGDD63 pKa = 3.39SGAFDD68 pKa = 3.99TNAHH72 pKa = 6.76DD73 pKa = 3.97EE74 pKa = 4.4FDD76 pKa = 4.43PVTHH80 pKa = 5.98TWITRR85 pKa = 11.84APLPINNRR93 pKa = 11.84GMGASLGPDD102 pKa = 2.96GRR104 pKa = 11.84IYY106 pKa = 10.88VYY108 pKa = 10.9GGFAGWGSIGAVYY121 pKa = 10.03AYY123 pKa = 8.93TPSTDD128 pKa = 2.46TWAPLASMPTPQWEE142 pKa = 4.23TRR144 pKa = 11.84GDD146 pKa = 3.52FGSDD150 pKa = 2.39GKK152 pKa = 11.28LYY154 pKa = 11.03VFGGEE159 pKa = 4.54TNGSASAVTQIYY171 pKa = 8.34TPSTNTWTTGASMPGGRR188 pKa = 11.84RR189 pKa = 11.84QHH191 pKa = 5.56GAFRR195 pKa = 11.84GSDD198 pKa = 2.83GRR200 pKa = 11.84FYY202 pKa = 11.57VVGGQDD208 pKa = 3.03ASAATAGTYY217 pKa = 9.6IYY219 pKa = 11.06NPTTNTWTTGPAMPAAANSFGQAVSTDD246 pKa = 3.04RR247 pKa = 11.84SRR249 pKa = 11.84FFVLGGSTSYY259 pKa = 11.47NNEE262 pKa = 3.83STPLFDD268 pKa = 3.15TVYY271 pKa = 9.07MFNVNTQEE279 pKa = 4.04WTSLTGFPTARR290 pKa = 11.84RR291 pKa = 11.84EE292 pKa = 3.88LGATVTHH299 pKa = 6.38CRR301 pKa = 11.84LRR303 pKa = 11.84TLGGSTGTSVTTHH316 pKa = 5.7EE317 pKa = 4.44VFTLTGAPDD326 pKa = 3.74TNGNGQPDD334 pKa = 4.14YY335 pKa = 11.59CEE337 pKa = 5.71DD338 pKa = 4.57PDD340 pKa = 4.96IDD342 pKa = 5.35DD343 pKa = 5.72DD344 pKa = 4.53NVPNSADD351 pKa = 3.43NCPTVPNPGQEE362 pKa = 4.28NQDD365 pKa = 3.19HH366 pKa = 7.17DD367 pKa = 4.43AQGDD371 pKa = 3.81ACDD374 pKa = 4.35PDD376 pKa = 4.72ADD378 pKa = 4.93NDD380 pKa = 4.18ALPNGQDD387 pKa = 3.29NCPLHH392 pKa = 6.88PNADD396 pKa = 3.84QTDD399 pKa = 3.57SDD401 pKa = 4.76ADD403 pKa = 3.9GLGNACDD410 pKa = 4.4PDD412 pKa = 3.74NDD414 pKa = 3.99NDD416 pKa = 3.93GTADD420 pKa = 4.44LSDD423 pKa = 3.81NCPSQSNADD432 pKa = 3.52QHH434 pKa = 6.67DD435 pKa = 3.81TDD437 pKa = 4.7GDD439 pKa = 4.53SIGDD443 pKa = 3.72ACDD446 pKa = 3.9SDD448 pKa = 5.21DD449 pKa = 5.72DD450 pKa = 4.61NDD452 pKa = 5.47SIADD456 pKa = 3.84PQDD459 pKa = 3.39NCPLVANTDD468 pKa = 3.38QRR470 pKa = 11.84DD471 pKa = 3.48TDD473 pKa = 3.73GDD475 pKa = 4.53SIGDD479 pKa = 3.76ACDD482 pKa = 3.6SDD484 pKa = 3.93TDD486 pKa = 4.01SDD488 pKa = 4.09NDD490 pKa = 4.02TVPDD494 pKa = 3.72VTDD497 pKa = 3.32NCALVPNPDD506 pKa = 3.07QANADD511 pKa = 3.67KK512 pKa = 11.14DD513 pKa = 4.17EE514 pKa = 4.68QGDD517 pKa = 3.87ACDD520 pKa = 5.24SDD522 pKa = 4.83DD523 pKa = 6.31DD524 pKa = 4.62NDD526 pKa = 4.03TVADD530 pKa = 3.89EE531 pKa = 4.35WDD533 pKa = 3.63NCPFIPNTDD542 pKa = 3.43QADD545 pKa = 3.43SDD547 pKa = 4.52GNGKK551 pKa = 10.56GDD553 pKa = 3.53VCDD556 pKa = 4.21VDD558 pKa = 4.7NDD560 pKa = 3.73TDD562 pKa = 4.15KK563 pKa = 11.81DD564 pKa = 3.92GVANATDD571 pKa = 3.73NCPLVANPDD580 pKa = 3.71QLDD583 pKa = 3.52SDD585 pKa = 4.24GDD587 pKa = 4.4GVGDD591 pKa = 4.02ACDD594 pKa = 3.6EE595 pKa = 4.49SGGGAGGCGGGCGAGPIGSSSLMLWALAGLALRR628 pKa = 11.84ARR630 pKa = 11.84RR631 pKa = 11.84RR632 pKa = 11.84FARR635 pKa = 3.78

Molecular weight: 65.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A085WNG5|A0A085WNG5_9DELT Uncharacterized protein OS=Hyalangium minutum OX=394096 GN=DB31_7130 PE=4 SV=1
MM1 pKa = 7.07VRR3 pKa = 11.84GHH5 pKa = 5.61STSGFHH11 pKa = 7.19GNRR14 pKa = 11.84PSSRR18 pKa = 11.84FWPARR23 pKa = 11.84GALGQALHH31 pKa = 6.76GSAAAAPAQGAAGRR45 pKa = 11.84RR46 pKa = 11.84HH47 pKa = 6.16LSLSALRR54 pKa = 11.84SVLNAHH60 pKa = 7.28LSPLSSRR67 pKa = 11.84SSPSMAPARR76 pKa = 11.84PQSPPAHH83 pKa = 6.34RR84 pKa = 4.59

Molecular weight: 8.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8967

0

8967

3319859

37

10488

370.2

40.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.534 ± 0.037

0.944 ± 0.012

4.794 ± 0.02

6.591 ± 0.036

3.387 ± 0.018

8.568 ± 0.032

2.043 ± 0.012

3.239 ± 0.017

3.263 ± 0.027

10.931 ± 0.033

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.946 ± 0.012

2.333 ± 0.021

6.215 ± 0.027

3.772 ± 0.016

7.472 ± 0.034

6.055 ± 0.027

5.592 ± 0.039

7.778 ± 0.028

1.358 ± 0.012

2.188 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski