Flanders hapavirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Hapavirus

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A077CZE0|A0A077CZE0_9RHAB SH protein OS=Flanders hapavirus OX=1972612 PE=4 SV=1
MM1 pKa = 7.99DD2 pKa = 5.42LYY4 pKa = 10.74INIGITFHH12 pKa = 6.52YY13 pKa = 9.87NNSYY17 pKa = 10.84LDD19 pKa = 3.79NDD21 pKa = 3.93SLNWIISRR29 pKa = 11.84MIYY32 pKa = 10.41DD33 pKa = 4.42CVRR36 pKa = 11.84EE37 pKa = 4.06SGIPGDD43 pKa = 3.77VAAFAINMAWEE54 pKa = 4.3HH55 pKa = 6.04VDD57 pKa = 3.91ISFDD61 pKa = 3.54SDD63 pKa = 3.95KK64 pKa = 10.32ITHH67 pKa = 6.69GYY69 pKa = 9.76CWLQEE74 pKa = 4.02AVSLPGTPKK83 pKa = 10.94DD84 pKa = 3.96LDD86 pKa = 3.63KK87 pKa = 11.71LNNTFSSRR95 pKa = 11.84GNFFIQGDD103 pKa = 3.78EE104 pKa = 3.93ALGEE108 pKa = 4.05VEE110 pKa = 4.55YY111 pKa = 11.19VFFVAEE117 pKa = 4.04PTLQEE122 pKa = 3.82GRR124 pKa = 11.84PWNMLWHH131 pKa = 7.16PIFVDD136 pKa = 3.77PQAYY140 pKa = 8.81HH141 pKa = 6.25VKK143 pKa = 10.44RR144 pKa = 11.84NPDD147 pKa = 2.83VVAYY151 pKa = 9.81KK152 pKa = 10.56FGFQHH157 pKa = 7.53LIYY160 pKa = 10.22PP161 pKa = 4.71

Molecular weight: 18.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|T2FGJ3|T2FGJ3_9RHAB U2 OS=Flanders hapavirus OX=1972612 GN=U2 PE=4 SV=1
MM1 pKa = 7.37GFDD4 pKa = 3.03IGKK7 pKa = 10.11DD8 pKa = 2.6IGKK11 pKa = 8.87PLKK14 pKa = 10.23EE15 pKa = 4.27AFDD18 pKa = 4.2KK19 pKa = 11.12FGSDD23 pKa = 3.09IKK25 pKa = 10.51ITFLTVLNWMKK36 pKa = 10.06WISIGILIVISIILICKK53 pKa = 8.23IVKK56 pKa = 9.81VLFQFGKK63 pKa = 10.38CLWSGFKK70 pKa = 10.36CCRR73 pKa = 11.84KK74 pKa = 9.56CFKK77 pKa = 10.47SSKK80 pKa = 8.84TRR82 pKa = 11.84AKK84 pKa = 10.41SSKK87 pKa = 10.45EE88 pKa = 3.64KK89 pKa = 10.47IKK91 pKa = 10.81LKK93 pKa = 10.37RR94 pKa = 11.84ATKK97 pKa = 9.95MIRR100 pKa = 11.84NPLRR104 pKa = 11.84RR105 pKa = 11.84KK106 pKa = 9.27KK107 pKa = 10.7SRR109 pKa = 11.84IKK111 pKa = 10.4KK112 pKa = 8.1VPSVIKK118 pKa = 10.64LII120 pKa = 4.14

Molecular weight: 13.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

2119

120

618

264.9

30.41

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.964 ± 0.763

1.888 ± 0.344

6.088 ± 0.641

5.286 ± 0.358

4.578 ± 0.523

5.663 ± 0.58

2.076 ± 0.316

7.881 ± 0.733

7.598 ± 1.063

8.495 ± 0.292

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.548 ± 0.45

5.427 ± 0.482

4.908 ± 0.486

3.398 ± 0.309

4.483 ± 0.413

8.164 ± 0.829

5.05 ± 0.499

5.71 ± 0.572

1.935 ± 0.318

4.861 ± 0.645
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski