Bizionia argentinensis JUB59

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia; Bizionia argentinensis

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2926 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G2EGL8|G2EGL8_9FLAO tRNA (Guanine-N1)-methyltransferase OS=Bizionia argentinensis JUB59 OX=1046627 GN=BZARG_2276 PE=4 SV=1
MM1 pKa = 7.67NLRR4 pKa = 11.84KK5 pKa = 9.58ILVLLLAVSSVITACKK21 pKa = 10.01KK22 pKa = 10.77DD23 pKa = 4.24DD24 pKa = 4.78DD25 pKa = 5.05DD26 pKa = 6.95GPMTVEE32 pKa = 4.13LRR34 pKa = 11.84DD35 pKa = 3.46AAEE38 pKa = 4.49VYY40 pKa = 10.74AEE42 pKa = 4.66DD43 pKa = 4.58MIDD46 pKa = 3.22IQDD49 pKa = 3.63YY50 pKa = 11.37LEE52 pKa = 4.03THH54 pKa = 7.05FYY56 pKa = 10.78NYY58 pKa = 10.62EE59 pKa = 3.91EE60 pKa = 4.24FQLNSAYY67 pKa = 10.98SLANDD72 pKa = 3.25NFKK75 pKa = 10.7IVFDD79 pKa = 4.88TIAGTNANKK88 pKa = 9.61TPLIDD93 pKa = 3.67MVDD96 pKa = 3.68SKK98 pKa = 11.27IVTQGGIDD106 pKa = 3.38YY107 pKa = 8.64TFYY110 pKa = 10.86YY111 pKa = 10.74LNVRR115 pKa = 11.84EE116 pKa = 4.11GLGNEE121 pKa = 3.64IHH123 pKa = 7.09RR124 pKa = 11.84SDD126 pKa = 4.16EE127 pKa = 3.66ATLIYY132 pKa = 9.98EE133 pKa = 4.86GSSIPDD139 pKa = 3.06NYY141 pKa = 10.68VFDD144 pKa = 4.04SSVNEE149 pKa = 4.11SQFNLMAVGATSGVIRR165 pKa = 11.84GFMEE169 pKa = 4.04GVIEE173 pKa = 4.93FKK175 pKa = 10.69TSDD178 pKa = 3.55SYY180 pKa = 11.89DD181 pKa = 3.32INGDD185 pKa = 3.39GTVAYY190 pKa = 9.36HH191 pKa = 5.19NHH193 pKa = 6.88GIGAAFIPSGIGYY206 pKa = 9.17FNQPLAGVPSYY217 pKa = 10.95TPLIFKK223 pKa = 10.4FSLYY227 pKa = 10.45KK228 pKa = 9.86RR229 pKa = 11.84TILDD233 pKa = 3.63HH234 pKa = 7.42DD235 pKa = 4.78LDD237 pKa = 5.4GIPSYY242 pKa = 11.42LEE244 pKa = 4.18DD245 pKa = 5.08LNNNDD250 pKa = 5.63DD251 pKa = 5.53LFDD254 pKa = 6.13DD255 pKa = 4.95DD256 pKa = 4.68TDD258 pKa = 4.31GDD260 pKa = 3.86QTPNFLDD267 pKa = 3.97NDD269 pKa = 4.38DD270 pKa = 5.67DD271 pKa = 5.93GDD273 pKa = 4.2GYY275 pKa = 9.49LTKK278 pKa = 10.85DD279 pKa = 3.11EE280 pKa = 4.99LDD282 pKa = 3.4YY283 pKa = 11.66GEE285 pKa = 5.07YY286 pKa = 10.17VIQVGDD292 pKa = 3.75SDD294 pKa = 3.86PTFAANEE301 pKa = 4.21FEE303 pKa = 4.4SSRR306 pKa = 11.84VEE308 pKa = 3.78NNGQITIKK316 pKa = 9.95TVILRR321 pKa = 11.84DD322 pKa = 3.64TNGNGTPDD330 pKa = 3.76YY331 pKa = 10.79LDD333 pKa = 3.51EE334 pKa = 4.44TSIPDD339 pKa = 3.24

Molecular weight: 37.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G2EG69|G2EG69_9FLAO Tetratricopeptide repeat protein OS=Bizionia argentinensis JUB59 OX=1046627 GN=BZARG_1903 PE=4 SV=1
MM1 pKa = 7.7NIFLKK6 pKa = 10.63PLLYY10 pKa = 9.41FQKK13 pKa = 10.56HH14 pKa = 5.12GFHH17 pKa = 5.9VCQRR21 pKa = 11.84IADD24 pKa = 4.0RR25 pKa = 11.84MGIRR29 pKa = 11.84AKK31 pKa = 9.99VVRR34 pKa = 11.84TSFMYY39 pKa = 9.36LTFVTLGFGFAVYY52 pKa = 10.09LFIAFWMRR60 pKa = 11.84IKK62 pKa = 10.93DD63 pKa = 3.65LLFTKK68 pKa = 10.28RR69 pKa = 11.84SSVFDD74 pKa = 3.68LL75 pKa = 4.35

Molecular weight: 8.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2926

0

2926

948185

34

4606

324.1

36.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.454 ± 0.037

0.714 ± 0.015

5.649 ± 0.031

6.523 ± 0.044

5.322 ± 0.04

6.109 ± 0.047

1.83 ± 0.018

8.264 ± 0.047

7.796 ± 0.057

9.378 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.296 ± 0.021

6.23 ± 0.039

3.253 ± 0.025

3.372 ± 0.027

3.32 ± 0.031

6.509 ± 0.031

5.837 ± 0.057

6.173 ± 0.036

0.95 ± 0.017

4.022 ± 0.031
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski