Penicillium camemberti FM 013

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium; Penicillium camemberti

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14390 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0G4PNR8|A0A0G4PNR8_PENCA Str. FM013 OS=Penicillium camemberti FM 013 OX=1429867 GN=PCAMFM013_S025g000160 PE=4 SV=1
MM1 pKa = 8.28RR2 pKa = 11.84IQQLLPLCGLLLASVAIASKK22 pKa = 10.51LDD24 pKa = 3.57HH25 pKa = 7.65DD26 pKa = 5.06DD27 pKa = 3.5VPNRR31 pKa = 11.84CWPVCGSVVGIAKK44 pKa = 10.24SCDD47 pKa = 3.34AQHH50 pKa = 6.23EE51 pKa = 4.22RR52 pKa = 11.84DD53 pKa = 3.68SAEE56 pKa = 3.91IQCICDD62 pKa = 2.94WDD64 pKa = 3.85AAKK67 pKa = 8.92TQIPLCSACITQYY80 pKa = 9.21QTDD83 pKa = 3.8RR84 pKa = 11.84RR85 pKa = 11.84NHH87 pKa = 6.45NITNNDD93 pKa = 3.69HH94 pKa = 7.72DD95 pKa = 6.38DD96 pKa = 5.33DD97 pKa = 7.55DD98 pKa = 7.6DD99 pKa = 7.69DD100 pKa = 7.66DD101 pKa = 7.62DD102 pKa = 7.63DD103 pKa = 7.63DD104 pKa = 7.57DD105 pKa = 6.61DD106 pKa = 6.6DD107 pKa = 6.14NEE109 pKa = 4.5ALDD112 pKa = 4.81LVHH115 pKa = 6.72SCSLTTTTYY124 pKa = 10.94NSAATTVTGTSTTTAGSNTATATDD148 pKa = 3.61SSSTSGTNSQDD159 pKa = 2.87STTSVSSGSSDD170 pKa = 3.25SAGASGSASSPTPTPGAAAGISAPGAASMAGIMGLMAFAWLL211 pKa = 3.69

Molecular weight: 21.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0G4NYQ6|A0A0G4NYQ6_PENCA Histone-fold OS=Penicillium camemberti FM 013 OX=1429867 GN=PCAMFM013_S003g000006 PE=4 SV=1
MM1 pKa = 7.89PSNKK5 pKa = 8.19TFRR8 pKa = 11.84TKK10 pKa = 10.49QKK12 pKa = 9.65LAKK15 pKa = 9.74AQRR18 pKa = 11.84QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TGNTIRR36 pKa = 11.84YY37 pKa = 5.79NAKK40 pKa = 8.78RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.52WRR45 pKa = 11.84KK46 pKa = 8.43STLKK50 pKa = 10.46VV51 pKa = 3.09

Molecular weight: 6.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14390

0

14390

6205998

24

6350

431.3

47.82

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.266 ± 0.019

1.33 ± 0.009

5.61 ± 0.016

6.062 ± 0.025

3.83 ± 0.014

6.715 ± 0.021

2.479 ± 0.011

5.19 ± 0.016

4.607 ± 0.018

9.077 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.254 ± 0.008

3.757 ± 0.011

5.992 ± 0.028

4.052 ± 0.016

5.954 ± 0.019

8.37 ± 0.023

6.035 ± 0.017

6.098 ± 0.016

1.515 ± 0.008

2.807 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski