Malvastrum leaf curl virus - [G87]

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Malvastrum leaf curl virus

Average proteome isoelectric point is 7.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q2MDG7|Q2MDG7_9GEMI Transcriptional activator protein OS=Malvastrum leaf curl virus - [G87] OX=329291 GN=ac2 PE=3 SV=1
MM1 pKa = 7.71HH2 pKa = 7.66IYY4 pKa = 10.64DD5 pKa = 3.93CAIWGAPYY13 pKa = 10.35KK14 pKa = 10.36LPPSSPDD21 pKa = 3.46CLDD24 pKa = 4.06FEE26 pKa = 5.2CPPIPKK32 pKa = 9.89CLRR35 pKa = 11.84TGRR38 pKa = 11.84FSIKK42 pKa = 10.06AKK44 pKa = 10.62NYY46 pKa = 8.05FLTYY50 pKa = 9.22PEE52 pKa = 4.62CSLTKK57 pKa = 10.64EE58 pKa = 4.09EE59 pKa = 5.75ALSQLQNLQTPTNIKK74 pKa = 9.71FIKK77 pKa = 9.57ICRR80 pKa = 11.84EE81 pKa = 3.54LHH83 pKa = 6.27NNGNPHH89 pKa = 6.59LHH91 pKa = 6.66VLMQFEE97 pKa = 4.6GKK99 pKa = 10.13YY100 pKa = 10.06NCTNNRR106 pKa = 11.84FFDD109 pKa = 4.02LVSPTRR115 pKa = 11.84STHH118 pKa = 4.78FHH120 pKa = 6.87PNIQGAKK127 pKa = 9.25SSSDD131 pKa = 3.04VKK133 pKa = 11.25SYY135 pKa = 11.09INKK138 pKa = 10.49DD139 pKa = 2.62GDD141 pKa = 3.98TIEE144 pKa = 4.1WGQFQVDD151 pKa = 3.41GRR153 pKa = 11.84SARR156 pKa = 11.84GGQQSANDD164 pKa = 4.09AYY166 pKa = 10.74AQALNSGSKK175 pKa = 10.2SEE177 pKa = 4.03ALNVIRR183 pKa = 11.84EE184 pKa = 4.21LAPKK188 pKa = 10.52DD189 pKa = 3.64FVLQFHH195 pKa = 6.7NLNANLDD202 pKa = 4.29RR203 pKa = 11.84IFTPPVEE210 pKa = 4.63VYY212 pKa = 10.3ISPFSSSSFDD222 pKa = 3.27RR223 pKa = 11.84VPEE226 pKa = 3.93EE227 pKa = 4.04LEE229 pKa = 3.6EE230 pKa = 4.04WAVDD234 pKa = 3.76NVVSAAARR242 pKa = 11.84PLRR245 pKa = 11.84PMSIVVEE252 pKa = 4.27GDD254 pKa = 2.97SRR256 pKa = 11.84TGKK259 pKa = 8.52TMWARR264 pKa = 11.84SLGPHH269 pKa = 6.71NYY271 pKa = 10.18LCGHH275 pKa = 7.37LDD277 pKa = 4.41LSPKK281 pKa = 10.0IYY283 pKa = 11.0SNDD286 pKa = 2.4AWYY289 pKa = 10.92NVIDD293 pKa = 5.2DD294 pKa = 4.41VDD296 pKa = 3.61PHH298 pKa = 5.85YY299 pKa = 11.0LKK301 pKa = 10.7HH302 pKa = 6.2FKK304 pKa = 10.7EE305 pKa = 4.46FMGAQRR311 pKa = 11.84DD312 pKa = 3.88WPSNTKK318 pKa = 9.78YY319 pKa = 10.76GKK321 pKa = 9.21PVQIKK326 pKa = 10.41GGIPTIFLCNPGPNSSYY343 pKa = 11.07KK344 pKa = 10.49EE345 pKa = 3.93YY346 pKa = 10.94LDD348 pKa = 3.87EE349 pKa = 4.78EE350 pKa = 4.7KK351 pKa = 11.14NSALRR356 pKa = 11.84NWALKK361 pKa = 9.88NATFITLEE369 pKa = 3.98EE370 pKa = 4.04PLYY373 pKa = 10.77SGSHH377 pKa = 5.18QSPTPTRR384 pKa = 11.84QEE386 pKa = 3.53EE387 pKa = 4.21ANQEE391 pKa = 4.15EE392 pKa = 4.92EE393 pKa = 4.45GG394 pKa = 3.76

Molecular weight: 44.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q2MDH0|Q2MDH0_9GEMI Protein V2 OS=Malvastrum leaf curl virus - [G87] OX=329291 GN=av2 PE=3 SV=1
MM1 pKa = 7.71SKK3 pKa = 10.35RR4 pKa = 11.84PADD7 pKa = 3.52IVISTPASKK16 pKa = 10.29VRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LNFDD24 pKa = 2.99SPYY27 pKa = 10.45ASRR30 pKa = 11.84AAVPTVLVTNRR41 pKa = 11.84KK42 pKa = 9.43RR43 pKa = 11.84SWTHH47 pKa = 5.91RR48 pKa = 11.84PMNRR52 pKa = 11.84KK53 pKa = 8.16PKK55 pKa = 8.24MYY57 pKa = 10.47RR58 pKa = 11.84MYY60 pKa = 10.58RR61 pKa = 11.84SPDD64 pKa = 3.21VPRR67 pKa = 11.84GCEE70 pKa = 4.34GPCKK74 pKa = 10.35VQSFDD79 pKa = 3.26AKK81 pKa = 11.06NDD83 pKa = 3.27IGHH86 pKa = 6.11MGKK89 pKa = 10.22VICLSDD95 pKa = 3.42VTRR98 pKa = 11.84GTGLTHH104 pKa = 7.09RR105 pKa = 11.84VGKK108 pKa = 9.78RR109 pKa = 11.84FCVKK113 pKa = 10.05SLYY116 pKa = 10.31FVGKK120 pKa = 9.14IWMDD124 pKa = 3.34EE125 pKa = 4.02NIKK128 pKa = 10.41VKK130 pKa = 10.66NHH132 pKa = 5.45TNTVLFWIVRR142 pKa = 11.84DD143 pKa = 3.85RR144 pKa = 11.84RR145 pKa = 11.84PTGTPNDD152 pKa = 3.71FQQVFNVYY160 pKa = 10.67DD161 pKa = 4.09NEE163 pKa = 4.37PSTATVKK170 pKa = 10.59NDD172 pKa = 3.0QRR174 pKa = 11.84DD175 pKa = 3.36RR176 pKa = 11.84FQVLRR181 pKa = 11.84RR182 pKa = 11.84FQATVTGGQYY192 pKa = 10.18AAKK195 pKa = 8.87EE196 pKa = 3.58QAIIRR201 pKa = 11.84KK202 pKa = 8.9FYY204 pKa = 10.66RR205 pKa = 11.84VNNSCSLQSPRR216 pKa = 11.84SWEE219 pKa = 3.65VRR221 pKa = 11.84EE222 pKa = 3.97SHH224 pKa = 6.52RR225 pKa = 11.84EE226 pKa = 3.91CSSLVYY232 pKa = 10.63GMHH235 pKa = 6.44SCLKK239 pKa = 10.64SRR241 pKa = 11.84VCYY244 pKa = 10.44FEE246 pKa = 5.03SKK248 pKa = 10.68EE249 pKa = 4.01LFLL252 pKa = 6.48

Molecular weight: 29.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1102

96

394

183.7

21.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.719 ± 0.702

2.904 ± 0.368

4.9 ± 0.345

4.9 ± 0.679

4.356 ± 0.529

4.537 ± 0.458

3.63 ± 0.524

5.082 ± 0.642

5.535 ± 0.624

7.35 ± 0.764

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.178 ± 0.528

5.717 ± 0.661

6.715 ± 0.731

4.628 ± 0.452

7.169 ± 1.276

9.074 ± 1.028

5.898 ± 0.916

5.808 ± 1.109

1.452 ± 0.175

3.448 ± 0.464
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski