Ceratitis capitata sigmavirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Sigmavirus; Capitata sigmavirus

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140D8P3|A0A140D8P3_9RHAB Polymerase-associated protein OS=Ceratitis capitata sigmavirus OX=1802949 GN=P PE=4 SV=1
MM1 pKa = 6.33TTNGKK6 pKa = 10.18KK7 pKa = 9.62IVNINSKK14 pKa = 10.01KK15 pKa = 10.36SYY17 pKa = 10.29VVPCVYY23 pKa = 10.72AEE25 pKa = 4.31RR26 pKa = 11.84SPEE29 pKa = 4.25FPIDD33 pKa = 3.25WFDD36 pKa = 3.44TTRR39 pKa = 11.84DD40 pKa = 3.63KK41 pKa = 11.14PILNIQIFKK50 pKa = 10.83EE51 pKa = 3.95CDD53 pKa = 2.99LDD55 pKa = 4.24KK56 pKa = 11.26ARR58 pKa = 11.84QYY60 pKa = 12.09ADD62 pKa = 3.7AFLKK66 pKa = 9.57GTIHH70 pKa = 5.64GTIPVTTYY78 pKa = 10.9LYY80 pKa = 11.22YY81 pKa = 11.2LFLTAKK87 pKa = 7.73EE88 pKa = 4.16TLTRR92 pKa = 11.84DD93 pKa = 2.87WTSYY97 pKa = 10.35RR98 pKa = 11.84MNLKK102 pKa = 10.31ASEE105 pKa = 4.18QVTPLSLLTVNKK117 pKa = 10.3EE118 pKa = 4.3EE119 pKa = 4.31VDD121 pKa = 3.54QTPLTNPTTLDD132 pKa = 3.51NNSDD136 pKa = 3.5KK137 pKa = 11.18SILLALVGIYY147 pKa = 9.92RR148 pKa = 11.84LHH150 pKa = 5.45TTHH153 pKa = 7.45PALVDD158 pKa = 3.32IVTDD162 pKa = 4.94RR163 pKa = 11.84INLLIQQATPSDD175 pKa = 3.53KK176 pKa = 10.74VQYY179 pKa = 10.84SVDD182 pKa = 3.66LAKK185 pKa = 10.34TNSGYY190 pKa = 11.09LSGNDD195 pKa = 3.21SVEE198 pKa = 4.13ILLSALDD205 pKa = 3.64MFADD209 pKa = 4.18KK210 pKa = 10.85FPANKK215 pKa = 9.85YY216 pKa = 7.67SQARR220 pKa = 11.84IGTIILRR227 pKa = 11.84YY228 pKa = 9.21AGCSALLDD236 pKa = 3.8LTYY239 pKa = 7.27MTKK242 pKa = 9.92MIACDD247 pKa = 3.46GVLDD251 pKa = 3.74VLQWVFLPRR260 pKa = 11.84VGQEE264 pKa = 3.64LDD266 pKa = 3.24AMLSKK271 pKa = 10.67EE272 pKa = 3.92DD273 pKa = 4.04SEE275 pKa = 4.36ITKK278 pKa = 10.07EE279 pKa = 4.1DD280 pKa = 3.75SYY282 pKa = 11.77FPYY285 pKa = 11.05LLGLRR290 pKa = 11.84LSSKK294 pKa = 10.5SPYY297 pKa = 9.26AASSAPQLHH306 pKa = 6.5HH307 pKa = 6.87LVHH310 pKa = 6.7AVGSLMGLSRR320 pKa = 11.84SINALLIDD328 pKa = 4.46PGTPNMVANNAALIFLANKK347 pKa = 9.5RR348 pKa = 11.84LSGLKK353 pKa = 9.29VVYY356 pKa = 10.05MNEE359 pKa = 3.8DD360 pKa = 3.54DD361 pKa = 5.14AKK363 pKa = 11.26VNQTQQEE370 pKa = 4.48KK371 pKa = 10.68ASQTRR376 pKa = 11.84QQNISEE382 pKa = 4.09EE383 pKa = 4.4DD384 pKa = 3.46ALSSRR389 pKa = 11.84DD390 pKa = 4.4LDD392 pKa = 4.19DD393 pKa = 4.84EE394 pKa = 4.44QPKK397 pKa = 9.0TPRR400 pKa = 11.84DD401 pKa = 3.3WFNWYY406 pKa = 9.61CDD408 pKa = 4.05KK409 pKa = 11.04DD410 pKa = 3.45WKK412 pKa = 9.21FTKK415 pKa = 10.14KK416 pKa = 10.15EE417 pKa = 3.76YY418 pKa = 11.11LEE420 pKa = 4.2IRR422 pKa = 11.84DD423 pKa = 3.54AVMSIKK429 pKa = 10.4NPRR432 pKa = 11.84SGTVGAWTVEE442 pKa = 4.27TFLSLINADD451 pKa = 3.46IYY453 pKa = 11.7

Molecular weight: 51.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140D8P6|A0A140D8P6_9RHAB Glycoprotein OS=Ceratitis capitata sigmavirus OX=1802949 GN=G PE=4 SV=1
MM1 pKa = 7.39NGKK4 pKa = 8.81KK5 pKa = 9.91QLVRR9 pKa = 11.84FKK11 pKa = 10.16EE12 pKa = 4.08QTPTTSKK19 pKa = 10.88NLSKK23 pKa = 10.45PKK25 pKa = 10.47EE26 pKa = 4.26EE27 pKa = 3.89ISSPFKK33 pKa = 10.52PIYY36 pKa = 7.59TTTLPSAPTLTPKK49 pKa = 9.91VIKK52 pKa = 9.96WDD54 pKa = 3.6VTSSLRR60 pKa = 11.84LTTNRR65 pKa = 11.84RR66 pKa = 11.84PKK68 pKa = 8.78EE69 pKa = 3.96WKK71 pKa = 10.1SIQCILAVLIDD82 pKa = 4.62EE83 pKa = 4.6YY84 pKa = 11.17AGPEE88 pKa = 3.53MWRR91 pKa = 11.84SVFEE95 pKa = 3.88LFYY98 pKa = 10.99WMLSRR103 pKa = 11.84NIAEE107 pKa = 4.9LPSSSDD113 pKa = 3.13RR114 pKa = 11.84YY115 pKa = 11.02VYY117 pKa = 10.7GADD120 pKa = 3.61FNEE123 pKa = 4.36LTLVHH128 pKa = 6.6HH129 pKa = 6.95NIYY132 pKa = 10.84YY133 pKa = 10.78LIDD136 pKa = 3.35QGQDD140 pKa = 3.13YY141 pKa = 10.09HH142 pKa = 6.44FHH144 pKa = 5.34YY145 pKa = 9.49TGKK148 pKa = 9.79IRR150 pKa = 11.84DD151 pKa = 3.76MKK153 pKa = 10.2YY154 pKa = 10.58SIVFSCSLKK163 pKa = 8.58PTKK166 pKa = 9.98RR167 pKa = 11.84DD168 pKa = 3.41CYY170 pKa = 10.83SIARR174 pKa = 11.84LQEE177 pKa = 4.01YY178 pKa = 10.45KK179 pKa = 10.84SIIYY183 pKa = 10.24EE184 pKa = 4.71DD185 pKa = 4.0IPDD188 pKa = 3.93LTTVLTLGQVKK199 pKa = 10.42YY200 pKa = 10.78MMLNQTIVLHH210 pKa = 5.35MM211 pKa = 4.68

Molecular weight: 24.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3981

211

2152

663.5

76.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.391 ± 0.596

1.658 ± 0.151

5.526 ± 0.587

4.999 ± 0.223

4.295 ± 0.421

4.446 ± 0.539

2.914 ± 0.28

8.415 ± 0.481

6.33 ± 0.23

10.952 ± 0.249

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.035 ± 0.226

6.556 ± 0.35

4.496 ± 0.308

3.542 ± 0.273

4.521 ± 0.192

8.314 ± 0.274

6.883 ± 0.279

4.974 ± 0.402

1.557 ± 0.267

4.195 ± 0.248
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski