Macaca mulatta papillomavirus 2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; primate papillomaviruses

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A385AHQ9|A0A385AHQ9_9PAPI Protein E6 OS=Macaca mulatta papillomavirus 2 OX=2294150 GN=E6 PE=3 SV=1
MM1 pKa = 7.33HH2 pKa = 7.29GKK4 pKa = 10.24APTLKK9 pKa = 10.49EE10 pKa = 3.88IILNLEE16 pKa = 4.17PEE18 pKa = 4.43PVNLQCQEE26 pKa = 4.04VLEE29 pKa = 5.41DD30 pKa = 5.2SDD32 pKa = 6.3DD33 pKa = 5.82DD34 pKa = 5.1DD35 pKa = 5.16DD36 pKa = 5.97QVDD39 pKa = 3.85ATQPTQPARR48 pKa = 11.84QAYY51 pKa = 8.85KK52 pKa = 10.47VLCQCAGGCCKK63 pKa = 10.13SVRR66 pKa = 11.84LVVYY70 pKa = 7.47STKK73 pKa = 10.77EE74 pKa = 3.99GIQRR78 pKa = 11.84LHH80 pKa = 7.2DD81 pKa = 4.48LLVDD85 pKa = 3.83DD86 pKa = 5.63ALNIVCPTCACKK98 pKa = 10.39LL99 pKa = 3.66

Molecular weight: 10.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A385AH66|A0A385AH66_9PAPI Replication protein E1 OS=Macaca mulatta papillomavirus 2 OX=2294150 GN=E1 PE=3 SV=1
MM1 pKa = 7.44VMQKK5 pKa = 9.67IACHH9 pKa = 5.3MLCGLTFMCIQRR21 pKa = 11.84TYY23 pKa = 10.68GQRR26 pKa = 11.84CLVGSMQGVCTMTRR40 pKa = 11.84RR41 pKa = 11.84ARR43 pKa = 11.84GCTMRR48 pKa = 11.84TLLTMQTCMGLMNNGKK64 pKa = 9.89CMWAATT70 pKa = 3.91

Molecular weight: 7.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2305

70

642

329.3

36.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.896 ± 0.55

2.993 ± 0.978

5.857 ± 0.505

5.249 ± 0.578

3.688 ± 0.625

6.681 ± 0.482

2.56 ± 0.386

3.948 ± 0.251

4.729 ± 0.778

7.896 ± 0.505

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.733 ± 0.625

3.991 ± 0.538

6.464 ± 1.415

4.772 ± 0.547

5.9 ± 0.557

6.768 ± 0.474

6.508 ± 0.584

6.508 ± 0.372

1.432 ± 0.336

3.427 ± 0.411
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski