TM7 phylum sp. oral taxon 351

Taxonomy: cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 797 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A563C6B8|A0A563C6B8_9BACT Uncharacterized protein OS=TM7 phylum sp. oral taxon 351 OX=713053 GN=EUA77_03720 PE=4 SV=1
MM1 pKa = 7.7FEE3 pKa = 4.47EE4 pKa = 4.63YY5 pKa = 11.07NNGVPDD11 pKa = 4.21RR12 pKa = 11.84LRR14 pKa = 11.84QVTAEE19 pKa = 4.15TMSPEE24 pKa = 3.95ALYY27 pKa = 10.1TLDD30 pKa = 3.73TYY32 pKa = 11.83SDD34 pKa = 3.78VSPQDD39 pKa = 3.13VIYY42 pKa = 10.24IDD44 pKa = 3.65EE45 pKa = 4.33SRR47 pKa = 11.84AEE49 pKa = 3.99GSGRR53 pKa = 11.84LIISKK58 pKa = 9.42GQSVKK63 pKa = 10.76LLEE66 pKa = 4.52EE67 pKa = 5.2ADD69 pKa = 4.21LSTPDD74 pKa = 4.44LVILMSVWQRR84 pKa = 11.84NDD86 pKa = 3.0QGDD89 pKa = 3.84LCRR92 pKa = 11.84GIVADD97 pKa = 3.59CRR99 pKa = 11.84FYY101 pKa = 11.24SGCFDD106 pKa = 3.81AEE108 pKa = 4.31YY109 pKa = 10.8GDD111 pKa = 5.46EE112 pKa = 5.33EE113 pKa = 5.87IDD115 pKa = 3.96DD116 pKa = 4.55CDD118 pKa = 5.74GIDD121 pKa = 4.3DD122 pKa = 5.19EE123 pKa = 5.79IYY125 pKa = 11.18NKK127 pKa = 10.43DD128 pKa = 3.58DD129 pKa = 3.62EE130 pKa = 4.6QVISAVVDD138 pKa = 3.44YY139 pKa = 11.56GDD141 pKa = 4.33DD142 pKa = 3.74GKK144 pKa = 11.68VKK146 pKa = 10.03IWGDD150 pKa = 3.34PTFFDD155 pKa = 3.9AARR158 pKa = 11.84YY159 pKa = 7.2MAGLVDD165 pKa = 3.81NEE167 pKa = 4.52SIEE170 pKa = 4.21KK171 pKa = 10.96NEE173 pKa = 3.89VCASSHH179 pKa = 5.66EE180 pKa = 4.19LQDD183 pKa = 3.61CRR185 pKa = 11.84SYY187 pKa = 10.56QHH189 pKa = 6.35NVGASALPCSLIFLALASAII209 pKa = 3.95

Molecular weight: 23.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A563CAN7|A0A563CAN7_9BACT Holliday junction ATP-dependent DNA helicase RuvB OS=TM7 phylum sp. oral taxon 351 OX=713053 GN=ruvB PE=3 SV=1
MM1 pKa = 7.29QDD3 pKa = 3.0EE4 pKa = 4.84SRR6 pKa = 11.84TSIRR10 pKa = 11.84ISQPSSARR18 pKa = 11.84TRR20 pKa = 11.84MAQSQASYY28 pKa = 10.69RR29 pKa = 11.84RR30 pKa = 11.84MDD32 pKa = 4.13FAPVQTVRR40 pKa = 11.84RR41 pKa = 11.84AAASIPTDD49 pKa = 3.32RR50 pKa = 11.84DD51 pKa = 3.44LEE53 pKa = 4.02RR54 pKa = 11.84HH55 pKa = 6.27RR56 pKa = 11.84IAKK59 pKa = 9.75QEE61 pKa = 3.89MQRR64 pKa = 11.84RR65 pKa = 11.84EE66 pKa = 4.49AIRR69 pKa = 11.84QQIEE73 pKa = 3.78EE74 pKa = 4.06QNRR77 pKa = 11.84LKK79 pKa = 10.88NLNQRR84 pKa = 11.84RR85 pKa = 11.84IEE87 pKa = 3.95AARR90 pKa = 11.84QEE92 pKa = 4.1LSEE95 pKa = 4.11YY96 pKa = 9.98QAAEE100 pKa = 4.1EE101 pKa = 3.98QRR103 pKa = 11.84TRR105 pKa = 11.84ALEE108 pKa = 3.91AEE110 pKa = 4.24RR111 pKa = 11.84QRR113 pKa = 11.84AIEE116 pKa = 4.16SQRR119 pKa = 11.84LAQRR123 pKa = 11.84EE124 pKa = 4.26ALEE127 pKa = 4.07KK128 pKa = 9.16MAARR132 pKa = 11.84RR133 pKa = 11.84RR134 pKa = 11.84AMEE137 pKa = 3.46QEE139 pKa = 3.3ARR141 pKa = 11.84RR142 pKa = 11.84RR143 pKa = 11.84QIEE146 pKa = 3.95EE147 pKa = 3.46QDD149 pKa = 2.94RR150 pKa = 11.84KK151 pKa = 8.99MRR153 pKa = 11.84AMQEE157 pKa = 3.79MQRR160 pKa = 11.84QQEE163 pKa = 3.78ASKK166 pKa = 10.56INVSRR171 pKa = 11.84RR172 pKa = 11.84ISVAPVQTSPFKK184 pKa = 10.94KK185 pKa = 8.78VTNPAARR192 pKa = 11.84IQARR196 pKa = 11.84SVDD199 pKa = 3.92MQAKK203 pKa = 5.59TTISVSDD210 pKa = 3.82TQAKK214 pKa = 8.22PALRR218 pKa = 11.84SAGDD222 pKa = 3.74TKK224 pKa = 11.03VLPASRR230 pKa = 11.84IQVVASPNRR239 pKa = 11.84KK240 pKa = 8.7LFGRR244 pKa = 11.84IRR246 pKa = 11.84PAGPSRR252 pKa = 11.84QVPQDD257 pKa = 3.39EE258 pKa = 4.16QDD260 pKa = 3.84PLVQSARR267 pKa = 11.84NSHH270 pKa = 6.4IEE272 pKa = 3.77LSTSGASITSDD283 pKa = 3.09SDD285 pKa = 4.24LEE287 pKa = 4.38DD288 pKa = 3.34MLYY291 pKa = 10.87DD292 pKa = 3.64AFEE295 pKa = 5.67DD296 pKa = 4.08STSDD300 pKa = 3.19TPEE303 pKa = 3.99RR304 pKa = 11.84LSSKK308 pKa = 10.37SRR310 pKa = 11.84NQSQNSS316 pKa = 3.35

Molecular weight: 36.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

797

0

797

235844

38

1280

295.9

33.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.545 ± 0.08

0.639 ± 0.024

5.837 ± 0.069

6.884 ± 0.099

4.046 ± 0.061

6.418 ± 0.083

1.749 ± 0.038

7.543 ± 0.08

7.425 ± 0.088

9.246 ± 0.077

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.369 ± 0.04

4.987 ± 0.08

3.641 ± 0.055

3.685 ± 0.061

4.765 ± 0.071

6.663 ± 0.082

5.691 ± 0.078

6.643 ± 0.069

0.896 ± 0.032

3.327 ± 0.051
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski