Ustilaginoidea virens RNA virus 5

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0S2UQ51|A0A0S2UQ51_9VIRU RNA-directed RNA polymerase OS=Ustilaginoidea virens RNA virus 5 OX=1756615 GN=RdRp PE=3 SV=1
MM1 pKa = 7.71ANTFNALAGVLGRR14 pKa = 11.84PRR16 pKa = 11.84TGTISGPAKK25 pKa = 8.38YY26 pKa = 9.52RR27 pKa = 11.84KK28 pKa = 8.91YY29 pKa = 9.72AASMTTSVQIRR40 pKa = 11.84GVDD43 pKa = 3.5DD44 pKa = 5.02LSVKK48 pKa = 10.4RR49 pKa = 11.84ILYY52 pKa = 9.37EE53 pKa = 3.35VGLRR57 pKa = 11.84HH58 pKa = 6.98KK59 pKa = 10.95SRR61 pKa = 11.84DD62 pKa = 3.37VALAATPEE70 pKa = 4.36TVTMIEE76 pKa = 4.0SAYY79 pKa = 10.45DD80 pKa = 3.48SSGLVSDD87 pKa = 4.44VLSGLARR94 pKa = 11.84KK95 pKa = 9.36FSNFSGTFDD104 pKa = 3.4VSNLAGVVEE113 pKa = 4.7RR114 pKa = 11.84LAKK117 pKa = 10.47GLAADD122 pKa = 3.57SAYY125 pKa = 10.46EE126 pKa = 4.32GGCTAQGLLGGNEE139 pKa = 3.97VRR141 pKa = 11.84VHH143 pKa = 6.91ALGTYY148 pKa = 7.04TGPVGAHH155 pKa = 6.99RR156 pKa = 11.84DD157 pKa = 3.56TVFIPRR163 pKa = 11.84LVDD166 pKa = 3.67SVLAPDD172 pKa = 3.9VFSVMVHH179 pKa = 5.81AVCGEE184 pKa = 4.01GGIVATDD191 pKa = 3.81LVEE194 pKa = 5.32LDD196 pKa = 3.44ANTRR200 pKa = 11.84EE201 pKa = 3.98PLIRR205 pKa = 11.84DD206 pKa = 3.21VDD208 pKa = 4.11DD209 pKa = 4.52GAFSTAVVDD218 pKa = 4.37ALRR221 pKa = 11.84LLGANFAASGQGEE234 pKa = 4.92LFSLAVVRR242 pKa = 11.84GLNAVLTVVGHH253 pKa = 5.2TDD255 pKa = 2.76EE256 pKa = 5.29GGVVRR261 pKa = 11.84DD262 pKa = 3.91VLRR265 pKa = 11.84KK266 pKa = 9.36GAFSTPYY273 pKa = 10.42GAVHH277 pKa = 7.04CGLQDD282 pKa = 3.82YY283 pKa = 9.84PGLPALASSSTSTIAGYY300 pKa = 10.42CDD302 pKa = 3.72SLLLSAAALVAHH314 pKa = 7.24CDD316 pKa = 3.23PGVVYY321 pKa = 10.8NGSWYY326 pKa = 8.02PTVLQGTSPVDD337 pKa = 3.28RR338 pKa = 11.84EE339 pKa = 4.16VRR341 pKa = 11.84PGAEE345 pKa = 4.09TPGTAEE351 pKa = 3.6MARR354 pKa = 11.84RR355 pKa = 11.84NKK357 pKa = 9.98RR358 pKa = 11.84ALLGRR363 pKa = 11.84FDD365 pKa = 3.74VFSRR369 pKa = 11.84QYY371 pKa = 9.25TAALAKK377 pKa = 10.73LFGLEE382 pKa = 4.1AGGTAASRR390 pKa = 11.84HH391 pKa = 4.61LTASASLLDD400 pKa = 4.57DD401 pKa = 4.89DD402 pKa = 5.42NRR404 pKa = 11.84HH405 pKa = 5.87LKK407 pKa = 9.42FASVSPYY414 pKa = 9.84FWVEE418 pKa = 3.52PTSIIAHH425 pKa = 6.15NFTGYY430 pKa = 9.62VAEE433 pKa = 4.58AEE435 pKa = 4.66GFASLCGRR443 pKa = 11.84GEE445 pKa = 4.29RR446 pKa = 11.84VTRR449 pKa = 11.84PAWEE453 pKa = 4.26QIAPAPGGDD462 pKa = 3.62VASSSYY468 pKa = 10.54YY469 pKa = 9.69IRR471 pKa = 11.84FRR473 pKa = 11.84GARR476 pKa = 11.84ACGYY480 pKa = 8.48LHH482 pKa = 7.0HH483 pKa = 6.62FHH485 pKa = 6.61GHH487 pKa = 6.35ANDD490 pKa = 3.21GMAFVVPRR498 pKa = 11.84QLDD501 pKa = 3.61PAGVIHH507 pKa = 6.96PGPDD511 pKa = 3.05QEE513 pKa = 4.57EE514 pKa = 4.31EE515 pKa = 3.95VRR517 pKa = 11.84DD518 pKa = 3.85RR519 pKa = 11.84LEE521 pKa = 4.16KK522 pKa = 9.85GAHH525 pKa = 5.65IGRR528 pKa = 11.84YY529 pKa = 6.79LWRR532 pKa = 11.84RR533 pKa = 11.84GQSPICAPGEE543 pKa = 3.81FLNLGEE549 pKa = 4.17TMALRR554 pKa = 11.84FRR556 pKa = 11.84HH557 pKa = 5.93LLHH560 pKa = 7.5DD561 pKa = 3.94EE562 pKa = 4.41DD563 pKa = 5.89GYY565 pKa = 11.86AVAVHH570 pKa = 6.28CPGHH574 pKa = 6.42GEE576 pKa = 4.09VEE578 pKa = 4.11ILEE581 pKa = 4.18VSYY584 pKa = 10.8AASAPIGISEE594 pKa = 4.75GPLTSAPAEE603 pKa = 3.89ARR605 pKa = 11.84RR606 pKa = 11.84ARR608 pKa = 11.84TAATRR613 pKa = 11.84ALVSACSQAQAYY625 pKa = 8.77SQATVDD631 pKa = 4.91DD632 pKa = 4.73LPLLASAPPVLRR644 pKa = 11.84RR645 pKa = 11.84AAQTPAKK652 pKa = 9.23PSEE655 pKa = 4.06GVILPGGGGKK665 pKa = 10.05LVDD668 pKa = 4.09VPSAPDD674 pKa = 3.6DD675 pKa = 3.85NEE677 pKa = 4.29AGYY680 pKa = 8.32TRR682 pKa = 11.84GTAQRR687 pKa = 11.84VVLHH691 pKa = 6.8ADD693 pKa = 3.49AVRR696 pKa = 11.84GPAVEE701 pKa = 3.95RR702 pKa = 11.84GQRR705 pKa = 11.84QGGGGVGPDD714 pKa = 3.58TPATVPRR721 pKa = 11.84PTRR724 pKa = 11.84VVVDD728 pKa = 4.18DD729 pKa = 5.21GEE731 pKa = 4.47DD732 pKa = 3.03AGAPGRR738 pKa = 11.84PALTAEE744 pKa = 4.49GATGRR749 pKa = 11.84RR750 pKa = 11.84EE751 pKa = 3.98PGRR754 pKa = 11.84AEE756 pKa = 3.74

Molecular weight:
79.17 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0S2UQ51|A0A0S2UQ51_9VIRU RNA-directed RNA polymerase OS=Ustilaginoidea virens RNA virus 5 OX=1756615 GN=RdRp PE=3 SV=1
MM1 pKa = 7.63AAHH4 pKa = 6.86LSISEE9 pKa = 3.79RR10 pKa = 11.84RR11 pKa = 11.84AALGHH16 pKa = 6.73LGDD19 pKa = 3.93VFYY22 pKa = 11.27GMLEE26 pKa = 3.97KK27 pKa = 11.1AEE29 pKa = 4.35FPAEE33 pKa = 3.96KK34 pKa = 9.96FRR36 pKa = 11.84EE37 pKa = 4.12LRR39 pKa = 11.84ATEE42 pKa = 3.92QLLLLSVGGGVLNSSLALAVEE63 pKa = 4.64FNRR66 pKa = 11.84RR67 pKa = 11.84VRR69 pKa = 11.84SRR71 pKa = 11.84VGLKK75 pKa = 9.51GQPGLKK81 pKa = 9.16TGVVVDD87 pKa = 3.68PLLRR91 pKa = 11.84VAASMLCARR100 pKa = 11.84FAVQVEE106 pKa = 4.45MTDD109 pKa = 3.33SNVRR113 pKa = 11.84RR114 pKa = 11.84LVRR117 pKa = 11.84LAFPEE122 pKa = 4.27ALPPLWSGVPAEE134 pKa = 4.26VRR136 pKa = 11.84GKK138 pKa = 10.83VSLSALAARR147 pKa = 11.84ADD149 pKa = 3.58LRR151 pKa = 11.84EE152 pKa = 3.67VCFPYY157 pKa = 9.29KK158 pKa = 9.85TVPQATRR165 pKa = 11.84KK166 pKa = 10.34ANVHH170 pKa = 5.96LASLLTPKK178 pKa = 10.38ARR180 pKa = 11.84EE181 pKa = 3.91LVGGLDD187 pKa = 4.79RR188 pKa = 11.84LIGWLAGRR196 pKa = 11.84CSDD199 pKa = 5.04DD200 pKa = 3.6QVCSAIIYY208 pKa = 9.29AHH210 pKa = 6.82ALGSRR215 pKa = 11.84WGPGAAEE222 pKa = 3.54IAARR226 pKa = 11.84YY227 pKa = 9.39ILDD230 pKa = 3.63PEE232 pKa = 4.64GAVSVGLVLKK242 pKa = 11.12AMGANSGPLGAALVEE257 pKa = 4.61GKK259 pKa = 9.85SLQGRR264 pKa = 11.84GVGSLDD270 pKa = 3.33LAKK273 pKa = 10.33EE274 pKa = 4.07AEE276 pKa = 4.36QRR278 pKa = 11.84CDD280 pKa = 3.85PDD282 pKa = 3.31WVAGKK287 pKa = 9.9VLHH290 pKa = 7.02CDD292 pKa = 3.5PEE294 pKa = 4.11EE295 pKa = 3.9LRR297 pKa = 11.84LVIRR301 pKa = 11.84QILSEE306 pKa = 4.05EE307 pKa = 4.04LKK309 pKa = 10.74GRR311 pKa = 11.84EE312 pKa = 4.01IVFDD316 pKa = 3.63TPEE319 pKa = 4.06QFWEE323 pKa = 5.35RR324 pKa = 11.84RR325 pKa = 11.84WQWCVNGSHH334 pKa = 6.19NRR336 pKa = 11.84TWDD339 pKa = 2.93ARR341 pKa = 11.84AGVDD345 pKa = 4.95LPASMPGCDD354 pKa = 2.73RR355 pKa = 11.84FYY357 pKa = 10.82RR358 pKa = 11.84RR359 pKa = 11.84AFSEE363 pKa = 4.3VCKK366 pKa = 11.01VEE368 pKa = 4.13TLTGWSGEE376 pKa = 4.1VLAGVSPKK384 pKa = 10.68LEE386 pKa = 4.2NGKK389 pKa = 7.79TRR391 pKa = 11.84AIFACDD397 pKa = 3.19TLSYY401 pKa = 11.01YY402 pKa = 11.0AFEE405 pKa = 4.82HH406 pKa = 6.43LLGPVSAAWLDD417 pKa = 3.56RR418 pKa = 11.84RR419 pKa = 11.84VVLDD423 pKa = 3.77PGRR426 pKa = 11.84VGHH429 pKa = 7.2LGMAEE434 pKa = 4.31RR435 pKa = 11.84INRR438 pKa = 11.84TRR440 pKa = 11.84DD441 pKa = 2.98GGGIDD446 pKa = 4.48VMLDD450 pKa = 3.21YY451 pKa = 11.55DD452 pKa = 4.93DD453 pKa = 5.9FNSHH457 pKa = 6.79HH458 pKa = 7.48SNTSMRR464 pKa = 11.84ILLEE468 pKa = 4.11EE469 pKa = 3.76TCAAVGYY476 pKa = 10.27DD477 pKa = 3.57EE478 pKa = 4.55EE479 pKa = 5.15LGRR482 pKa = 11.84KK483 pKa = 8.92LCQSFDD489 pKa = 3.74NTWVKK494 pKa = 9.83TPAGLSRR501 pKa = 11.84VRR503 pKa = 11.84GTLMSGHH510 pKa = 7.15RR511 pKa = 11.84GTTYY515 pKa = 10.57INSVLNAAYY524 pKa = 9.42IRR526 pKa = 11.84LAVGRR531 pKa = 11.84AAYY534 pKa = 9.89EE535 pKa = 4.36GMVSMHH541 pKa = 6.61VGDD544 pKa = 5.01DD545 pKa = 3.93VYY547 pKa = 11.73VNCPTPEE554 pKa = 4.08GVEE557 pKa = 4.09EE558 pKa = 4.28LVDD561 pKa = 3.46RR562 pKa = 11.84CAAIGCRR569 pKa = 11.84MNPTKK574 pKa = 10.62QSVGKK579 pKa = 10.53VGAEE583 pKa = 3.97FLRR586 pKa = 11.84MGIRR590 pKa = 11.84RR591 pKa = 11.84EE592 pKa = 4.01GAHH595 pKa = 6.75GYY597 pKa = 9.08LARR600 pKa = 11.84SVASLVSGNWVNEE613 pKa = 3.7KK614 pKa = 10.78VMDD617 pKa = 4.44PEE619 pKa = 4.36EE620 pKa = 4.65LLSSMVGTVRR630 pKa = 11.84SLINRR635 pKa = 11.84SGCEE639 pKa = 3.77TVPQLLAPAVSAVTRR654 pKa = 11.84IKK656 pKa = 10.55VARR659 pKa = 11.84CVSLLSGQSALEE671 pKa = 3.84GRR673 pKa = 11.84PVFNPRR679 pKa = 11.84DD680 pKa = 3.52GLIRR684 pKa = 11.84TWALRR689 pKa = 11.84VEE691 pKa = 4.63RR692 pKa = 11.84PASKK696 pKa = 10.64VKK698 pKa = 10.93AKK700 pKa = 10.29DD701 pKa = 3.61LPSNATDD708 pKa = 4.37DD709 pKa = 4.4YY710 pKa = 10.51LAKK713 pKa = 10.29AASVLEE719 pKa = 3.98LRR721 pKa = 11.84GAAMSTVDD729 pKa = 4.12PRR731 pKa = 11.84AAMLDD736 pKa = 3.17SSYY739 pKa = 11.31RR740 pKa = 11.84KK741 pKa = 7.6TLAGDD746 pKa = 3.7TDD748 pKa = 3.91PSKK751 pKa = 11.0IKK753 pKa = 9.77LTLRR757 pKa = 11.84SCTPVLARR765 pKa = 11.84GATNARR771 pKa = 11.84DD772 pKa = 3.92LLRR775 pKa = 11.84RR776 pKa = 11.84PCPPGALEE784 pKa = 5.36RR785 pKa = 11.84YY786 pKa = 8.62PLLQLVKK793 pKa = 10.63SGLRR797 pKa = 11.84DD798 pKa = 3.19SDD800 pKa = 3.36VRR802 pKa = 11.84EE803 pKa = 4.15LVRR806 pKa = 11.84EE807 pKa = 4.17AGGDD811 pKa = 3.04WTARR815 pKa = 11.84DD816 pKa = 3.5IGAEE820 pKa = 3.55AWGIPSRR827 pKa = 11.84SRR829 pKa = 11.84AISGVASYY837 pKa = 11.05TDD839 pKa = 3.39AASLARR845 pKa = 11.84RR846 pKa = 11.84AEE848 pKa = 3.96TDD850 pKa = 3.61VVFFPYY856 pKa = 9.13PVHH859 pKa = 5.96MM860 pKa = 5.35

Molecular weight:
93.43 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1616

756

860

808.0

86.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.314 ± 0.881

1.795 ± 0.317

5.446 ± 0.163

5.631 ± 0.318

2.537 ± 0.251

10.025 ± 0.908

2.166 ± 0.412

2.661 ± 0.099

2.661 ± 0.633

10.025 ± 0.871

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.609 ± 0.459

2.29 ± 0.205

5.446 ± 0.43

1.98 ± 0.181

8.54 ± 0.583

6.931 ± 0.213

4.95 ± 0.585

9.282 ± 0.074

1.176 ± 0.435

2.537 ± 0.251

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski