[Eubacterium] cellulosolvens 6
Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium; [Eubacterium] cellulosolvens
Average proteome isoelectric point is 5.96
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 2716 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|I5AQ40|I5AQ40_EUBCE Uncharacterized protein OS=[Eubacterium] cellulosolvens 6 OX=633697 GN=EubceDRAFT1_0042 PE=4 SV=1
MM1 pKa = 7.67GLTGCGSYY9 pKa = 10.8VSPGKK14 pKa = 10.25NSEE17 pKa = 4.21YY18 pKa = 10.62LDD20 pKa = 4.02SSDD23 pKa = 5.56SFISTCAIMDD33 pKa = 4.15PGMIHH38 pKa = 7.09VIDD41 pKa = 5.43IIQNDD46 pKa = 3.82GMDD49 pKa = 3.76SLIKK53 pKa = 10.65FGTDD57 pKa = 2.68EE58 pKa = 5.28DD59 pKa = 4.6GNEE62 pKa = 4.06LSAQAIMTKK71 pKa = 9.54IYY73 pKa = 10.57AKK75 pKa = 10.2QSEE78 pKa = 4.66LEE80 pKa = 3.98QPVIDD85 pKa = 4.31DD86 pKa = 4.92CEE88 pKa = 4.58ALLYY92 pKa = 10.36GSPDD96 pKa = 2.84HH97 pKa = 6.98FMDD100 pKa = 5.68VITKK104 pKa = 10.43NDD106 pKa = 3.47GKK108 pKa = 11.0LDD110 pKa = 3.93NDD112 pKa = 4.08DD113 pKa = 4.18VEE115 pKa = 5.13HH116 pKa = 6.91LLEE119 pKa = 5.54AIGEE123 pKa = 4.12IQAAGNMVGVQDD135 pKa = 5.61IPTQIQNAAINFDD148 pKa = 4.01NNGPDD153 pKa = 3.33ANN155 pKa = 4.09
MM1 pKa = 7.67GLTGCGSYY9 pKa = 10.8VSPGKK14 pKa = 10.25NSEE17 pKa = 4.21YY18 pKa = 10.62LDD20 pKa = 4.02SSDD23 pKa = 5.56SFISTCAIMDD33 pKa = 4.15PGMIHH38 pKa = 7.09VIDD41 pKa = 5.43IIQNDD46 pKa = 3.82GMDD49 pKa = 3.76SLIKK53 pKa = 10.65FGTDD57 pKa = 2.68EE58 pKa = 5.28DD59 pKa = 4.6GNEE62 pKa = 4.06LSAQAIMTKK71 pKa = 9.54IYY73 pKa = 10.57AKK75 pKa = 10.2QSEE78 pKa = 4.66LEE80 pKa = 3.98QPVIDD85 pKa = 4.31DD86 pKa = 4.92CEE88 pKa = 4.58ALLYY92 pKa = 10.36GSPDD96 pKa = 2.84HH97 pKa = 6.98FMDD100 pKa = 5.68VITKK104 pKa = 10.43NDD106 pKa = 3.47GKK108 pKa = 11.0LDD110 pKa = 3.93NDD112 pKa = 4.08DD113 pKa = 4.18VEE115 pKa = 5.13HH116 pKa = 6.91LLEE119 pKa = 5.54AIGEE123 pKa = 4.12IQAAGNMVGVQDD135 pKa = 5.61IPTQIQNAAINFDD148 pKa = 4.01NNGPDD153 pKa = 3.33ANN155 pKa = 4.09
Molecular weight: 16.66 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>tr|I5AQD0|I5AQD0_EUBCE Metal-dependent hydrolase beta-lactamase superfamily I OS=[Eubacterium] cellulosolvens 6 OX=633697 GN=EubceDRAFT1_0141 PE=4 SV=1
MM1 pKa = 7.69AEE3 pKa = 4.13VEE5 pKa = 4.26NTTAATAEE13 pKa = 4.19NNEE16 pKa = 4.17RR17 pKa = 11.84PAKK20 pKa = 9.94ADD22 pKa = 3.57RR23 pKa = 11.84AAAPARR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84VTRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.14VCVFCGKK45 pKa = 10.29DD46 pKa = 3.19NEE48 pKa = 4.48IDD50 pKa = 3.7YY51 pKa = 11.3KK52 pKa = 11.11DD53 pKa = 3.32AAKK56 pKa = 10.17LRR58 pKa = 11.84RR59 pKa = 11.84YY60 pKa = 9.43ISEE63 pKa = 3.95RR64 pKa = 11.84GKK66 pKa = 9.88ILPRR70 pKa = 11.84RR71 pKa = 11.84VTGNCAKK78 pKa = 9.83HH79 pKa = 5.26QRR81 pKa = 11.84AITLAVKK88 pKa = 10.39RR89 pKa = 11.84ARR91 pKa = 11.84HH92 pKa = 5.33LAILPYY98 pKa = 10.59VEE100 pKa = 5.17DD101 pKa = 3.58
MM1 pKa = 7.69AEE3 pKa = 4.13VEE5 pKa = 4.26NTTAATAEE13 pKa = 4.19NNEE16 pKa = 4.17RR17 pKa = 11.84PAKK20 pKa = 9.94ADD22 pKa = 3.57RR23 pKa = 11.84AAAPARR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84VTRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 9.14VCVFCGKK45 pKa = 10.29DD46 pKa = 3.19NEE48 pKa = 4.48IDD50 pKa = 3.7YY51 pKa = 11.3KK52 pKa = 11.11DD53 pKa = 3.32AAKK56 pKa = 10.17LRR58 pKa = 11.84RR59 pKa = 11.84YY60 pKa = 9.43ISEE63 pKa = 3.95RR64 pKa = 11.84GKK66 pKa = 9.88ILPRR70 pKa = 11.84RR71 pKa = 11.84VTGNCAKK78 pKa = 9.83HH79 pKa = 5.26QRR81 pKa = 11.84AITLAVKK88 pKa = 10.39RR89 pKa = 11.84ARR91 pKa = 11.84HH92 pKa = 5.33LAILPYY98 pKa = 10.59VEE100 pKa = 5.17DD101 pKa = 3.58
Molecular weight: 11.52 kDa
Isoelectric point according different methods:
Peptides (in silico digests for buttom-up proteomics)
Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.| Try ESI |
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| ChTry ESI |
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| ArgC ESI |
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| LysN ESI |
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| TryLysC ESI |
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| Try MALDI |
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| ChTry MALDI |
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| ArgC MALDI |
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| LysN MALDI |
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| TryLysC MALDI |
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| Try LTQ |
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| ChTry LTQ |
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| ArgC LTQ |
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| LysN LTQ |
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| TryLysC LTQ |
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| Try MSlow |
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| ChTry MSlow |
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| ArgC MSlow |
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| LysN MSlow |
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| TryLysC MSlow |
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| Try MShigh |
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| ChTry MShigh |
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| ArgC MShigh |
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| LysN MShigh |
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| TryLysC MShigh |
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General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
943410 |
30 |
4372 |
347.4 |
38.88 |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
|---|---|---|---|---|---|---|---|---|---|
7.783 ± 0.043 | 1.395 ± 0.019 |
6.218 ± 0.046 | 7.615 ± 0.055 |
3.939 ± 0.03 | 7.313 ± 0.047 |
1.763 ± 0.02 | 6.761 ± 0.046 |
6.526 ± 0.039 | 8.534 ± 0.051 |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|
2.981 ± 0.027 | 4.268 ± 0.031 |
3.375 ± 0.028 | 3.017 ± 0.024 |
5.022 ± 0.046 | 5.986 ± 0.036 |
5.589 ± 0.054 | 6.924 ± 0.04 |
0.924 ± 0.017 | 4.067 ± 0.033 |
Most of the basic statistics you can see at this page can be downloaded from this CSV file
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
| Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 | Contact: Lukasz P. Kozlowski |