Andreprevotia lacus DSM 23236

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Andreprevotia; Andreprevotia lacus

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4303 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1W1Y0Q2|A0A1W1Y0Q2_9NEIS Multidrug efflux pump OS=Andreprevotia lacus DSM 23236 OX=1121001 GN=SAMN02745857_04055 PE=4 SV=1
MM1 pKa = 7.47ATPSQQATIVQLNGQAFIRR20 pKa = 11.84DD21 pKa = 3.92ATGKK25 pKa = 7.27MTPLHH30 pKa = 6.46SGEE33 pKa = 4.78TLNQDD38 pKa = 3.07QVLVTSPDD46 pKa = 3.48GEE48 pKa = 4.5VVVLLPNGDD57 pKa = 3.83TQTVGPDD64 pKa = 2.87RR65 pKa = 11.84SVLLDD70 pKa = 3.57AQFMGAAPDD79 pKa = 3.63TTEE82 pKa = 3.98AAVAPSSVQGGTAQIDD98 pKa = 3.57QIVAQGGDD106 pKa = 3.28LSTDD110 pKa = 3.94LEE112 pKa = 4.22ATAAGLTGGGDD123 pKa = 3.61AGNGTHH129 pKa = 5.71TFIRR133 pKa = 11.84VGRR136 pKa = 11.84ISEE139 pKa = 4.37EE140 pKa = 3.94AGSTAFGTPGTPIGGAGAAEE160 pKa = 3.96QNGQNHH166 pKa = 6.39APVAVDD172 pKa = 4.31DD173 pKa = 4.67NSTGAANDD181 pKa = 3.99GLTSPEE187 pKa = 4.24DD188 pKa = 3.78TPLTISPLLLLSNDD202 pKa = 3.8GDD204 pKa = 4.27PDD206 pKa = 4.4GDD208 pKa = 3.97PLTIVSVQDD217 pKa = 3.69PVHH220 pKa = 5.86GTLSIDD226 pKa = 3.34ANNNIVFTPDD236 pKa = 3.08PNYY239 pKa = 10.8NGPASFSYY247 pKa = 10.47TIDD250 pKa = 3.62DD251 pKa = 4.05GRR253 pKa = 11.84GGTATATVNLNITPVNDD270 pKa = 3.72PATVSNDD277 pKa = 2.8AGTVKK282 pKa = 10.47EE283 pKa = 4.3DD284 pKa = 3.61TPTQTTVGGTLTITDD299 pKa = 3.44VDD301 pKa = 3.43TGEE304 pKa = 4.12QHH306 pKa = 6.82VVAQNVSNPYY316 pKa = 8.87GTFTVDD322 pKa = 5.17ADD324 pKa = 4.4GNWSFTIDD332 pKa = 3.46NTSPTVQALAEE343 pKa = 4.38GQTQVLTFDD352 pKa = 3.67VTSVDD357 pKa = 3.41GTGTGVVTITVVGTNDD373 pKa = 3.14NAVITAHH380 pKa = 6.98LPGDD384 pKa = 3.63DD385 pKa = 3.67AGTVKK390 pKa = 10.61EE391 pKa = 4.2DD392 pKa = 3.86TILATGGKK400 pKa = 9.7LDD402 pKa = 4.3VADD405 pKa = 5.15PDD407 pKa = 3.94TGEE410 pKa = 4.26SAVIAQTDD418 pKa = 3.53TTGTYY423 pKa = 10.83GSFSILADD431 pKa = 3.74GTWTYY436 pKa = 9.98TLNNASPVVQALNEE450 pKa = 4.4GEE452 pKa = 4.18SRR454 pKa = 11.84TEE456 pKa = 3.78VFQVQSQDD464 pKa = 2.92GSDD467 pKa = 3.21THH469 pKa = 6.62FVTVTVLGTNDD480 pKa = 3.21NAVITAHH487 pKa = 6.98LPGDD491 pKa = 3.63DD492 pKa = 3.67AGTVKK497 pKa = 10.61EE498 pKa = 4.24DD499 pKa = 4.14TILSTGGKK507 pKa = 9.71LDD509 pKa = 3.81VADD512 pKa = 4.76PDD514 pKa = 3.94AGQSAVVAQSNTTGTYY530 pKa = 10.27GSFSIAADD538 pKa = 3.93GTWTYY543 pKa = 11.53SLNNGSPIVQALNEE557 pKa = 4.42GEE559 pKa = 4.37SRR561 pKa = 11.84TEE563 pKa = 3.84TFQVQSLDD571 pKa = 3.4GTDD574 pKa = 3.14THH576 pKa = 6.4TVTVTILGTNDD587 pKa = 2.93AALIGGNDD595 pKa = 3.42SGTVKK600 pKa = 10.68EE601 pKa = 4.5DD602 pKa = 3.31TTLVTGGILTVSDD615 pKa = 3.57VDD617 pKa = 3.74TGQSSLVAEE626 pKa = 4.72TVTGTYY632 pKa = 8.95GTFSVDD638 pKa = 4.21ANGNWSYY645 pKa = 11.82VLNNSSPIVQALNDD659 pKa = 3.43GDD661 pKa = 4.05TRR663 pKa = 11.84VEE665 pKa = 4.16TFAVQSVDD673 pKa = 3.3GTTHH677 pKa = 5.92TVTVNVLGTNDD688 pKa = 4.21GEE690 pKa = 4.34QLPPPRR696 pKa = 11.84ISVSLDD702 pKa = 3.24SEE704 pKa = 4.36GDD706 pKa = 3.69TVFEE710 pKa = 3.85GNYY713 pKa = 10.63AVFNVHH719 pKa = 6.77LSYY722 pKa = 10.97PSTTDD727 pKa = 3.01VTFTPSQVSGTATVGTDD744 pKa = 3.05TSDD747 pKa = 3.18TLEE750 pKa = 4.13YY751 pKa = 9.98WNGSAWVAVSGGITIPAGQTDD772 pKa = 3.84VQVRR776 pKa = 11.84VATVADD782 pKa = 5.15GIYY785 pKa = 10.2EE786 pKa = 4.17GNEE789 pKa = 3.81NFSLHH794 pKa = 6.36VDD796 pKa = 3.56VTSGSTSNTSADD808 pKa = 3.39ATAVIIDD815 pKa = 3.71GDD817 pKa = 4.0KK818 pKa = 10.62PPEE821 pKa = 3.87VSISVSGEE829 pKa = 3.08GSMVHH834 pKa = 6.17EE835 pKa = 4.48GDD837 pKa = 3.58YY838 pKa = 11.46AVFNVHH844 pKa = 6.73LSGSSSTDD852 pKa = 3.22VVFTPSLVSGTATVGTDD869 pKa = 2.5TGTALEE875 pKa = 4.19YY876 pKa = 11.0SLNGTDD882 pKa = 3.08WFAVGTGVTIPAGQTDD898 pKa = 3.84VQVRR902 pKa = 11.84VATVADD908 pKa = 5.15GIYY911 pKa = 10.2EE912 pKa = 4.17GNEE915 pKa = 3.81NFSLHH920 pKa = 6.47VDD922 pKa = 3.54VTSSNTSNSSADD934 pKa = 3.29ATATIVDD941 pKa = 4.34ADD943 pKa = 4.28SPPQVTVSVSGEE955 pKa = 3.34GSMVHH960 pKa = 6.17EE961 pKa = 4.48GDD963 pKa = 3.58YY964 pKa = 11.46AVFNVHH970 pKa = 6.73LSGSSSTDD978 pKa = 3.22VVFTPSLVSGTATVGTDD995 pKa = 2.5TGTALEE1001 pKa = 4.3YY1002 pKa = 10.23WNGSAWVAISGGVTIPAGQTDD1023 pKa = 3.84VQVRR1027 pKa = 11.84VATVADD1033 pKa = 5.15GIYY1036 pKa = 10.2EE1037 pKa = 4.17GNEE1040 pKa = 3.81NFSLHH1045 pKa = 6.47VDD1047 pKa = 3.54VTSSNTSNTSADD1059 pKa = 3.31ATATIIDD1066 pKa = 4.17ADD1068 pKa = 4.1SPPVVSVSVSSEE1080 pKa = 3.22GSMVPEE1086 pKa = 4.12GAYY1089 pKa = 10.47AVFNVHH1095 pKa = 6.84LSGPSSGAISFTPSLHH1111 pKa = 7.25DD1112 pKa = 3.2GTAIIGTDD1120 pKa = 2.95TSTTLEE1126 pKa = 4.2YY1127 pKa = 10.42WNGSAWTVVSGDD1139 pKa = 2.95ITLAAGQTDD1148 pKa = 3.77VQVRR1152 pKa = 11.84VATIDD1157 pKa = 3.43DD1158 pKa = 4.24SIYY1161 pKa = 10.71EE1162 pKa = 4.16GNEE1165 pKa = 3.65NFSLQVHH1172 pKa = 5.22VTSGSTSNTDD1182 pKa = 3.0ASATAIIVDD1191 pKa = 3.96NDD1193 pKa = 3.72AQPVGHH1199 pKa = 7.59DD1200 pKa = 3.8DD1201 pKa = 4.16GYY1203 pKa = 9.47TVQEE1207 pKa = 4.07ASTNALASVLGNDD1220 pKa = 4.02TPSGLHH1226 pKa = 4.49VAKK1229 pKa = 10.21FATDD1233 pKa = 3.6GAGGGAVSADD1243 pKa = 3.23GSHH1246 pKa = 7.48TITTSLGGTVTMHH1259 pKa = 7.51ADD1261 pKa = 3.22GTFTYY1266 pKa = 8.65TIPDD1270 pKa = 3.54LHH1272 pKa = 6.46HH1273 pKa = 6.98TGTAVDD1279 pKa = 3.52SFYY1282 pKa = 11.59YY1283 pKa = 10.12QATDD1287 pKa = 3.61GNANTAWTKK1296 pKa = 10.47VSVNVTDD1303 pKa = 4.07TGPTAHH1309 pKa = 7.81DD1310 pKa = 3.83DD1311 pKa = 3.98TVSLNTVSTDD1321 pKa = 3.15TVNLVLVVDD1330 pKa = 4.33SSGSIGTTNLNTIKK1344 pKa = 10.63AALSHH1349 pKa = 6.8LMTTYY1354 pKa = 10.95GSALQSVMLVDD1365 pKa = 4.91FDD1367 pKa = 5.09DD1368 pKa = 3.98NARR1371 pKa = 11.84VFHH1374 pKa = 6.53VNTDD1378 pKa = 3.28GTGSVWLTQSQAEE1391 pKa = 4.36SKK1393 pKa = 10.49YY1394 pKa = 11.2SSITSGGNTDD1404 pKa = 3.39YY1405 pKa = 11.71DD1406 pKa = 3.94DD1407 pKa = 5.58AIKK1410 pKa = 10.43AVQDD1414 pKa = 3.58NYY1416 pKa = 9.93GTPPTAAKK1424 pKa = 9.0TYY1426 pKa = 10.52VYY1428 pKa = 9.72FVSDD1432 pKa = 4.2GEE1434 pKa = 4.41PTGSDD1439 pKa = 2.92GTNPNTIEE1447 pKa = 4.0PSEE1450 pKa = 4.02RR1451 pKa = 11.84ADD1453 pKa = 2.88WVNFLTGKK1461 pKa = 9.72VDD1463 pKa = 3.32EE1464 pKa = 5.21VYY1466 pKa = 10.77AIGIGSGVSQTDD1478 pKa = 3.0SDD1480 pKa = 4.51LLDD1483 pKa = 3.87VAWSSSGNDD1492 pKa = 3.17AGNVKK1497 pKa = 10.41LISTADD1503 pKa = 3.88DD1504 pKa = 3.72LSGTLTSIAQSNGNVTSNDD1523 pKa = 3.35DD1524 pKa = 3.63FGLDD1528 pKa = 3.56GAGSPKK1534 pKa = 10.19LVSVSYY1540 pKa = 10.73DD1541 pKa = 3.26ADD1543 pKa = 3.72GSGPGAATVYY1553 pKa = 10.33TFDD1556 pKa = 4.13ATHH1559 pKa = 6.46HH1560 pKa = 6.89AYY1562 pKa = 9.39TINLGAGRR1570 pKa = 11.84GTLVLHH1576 pKa = 7.61DD1577 pKa = 5.29DD1578 pKa = 3.63GSYY1581 pKa = 10.19TYY1583 pKa = 9.75TPASGSSNGAPFTVQYY1599 pKa = 9.46TIQDD1603 pKa = 3.52ADD1605 pKa = 3.96GSQSTASMLFDD1616 pKa = 4.66PNGTPVVGTAPSITVSEE1633 pKa = 4.32EE1634 pKa = 3.85GLPGANPDD1642 pKa = 3.57TTGNTDD1648 pKa = 3.34TTNLALRR1655 pKa = 11.84SGTIAITDD1663 pKa = 3.82PDD1665 pKa = 3.81STDD1668 pKa = 3.38FNLRR1672 pKa = 11.84FAAPTATLTSGGTALSWSGAGTGVLIGMANGVEE1705 pKa = 4.81IIRR1708 pKa = 11.84ISQSDD1713 pKa = 3.41THH1715 pKa = 7.53GGYY1718 pKa = 9.33QVQLSGSLDD1727 pKa = 3.42HH1728 pKa = 6.91ATAGQEE1734 pKa = 4.09DD1735 pKa = 4.61VKK1737 pKa = 11.41SFGVLVTVDD1746 pKa = 4.48DD1747 pKa = 4.5GAAANNTTTTTLTVNVEE1764 pKa = 4.11DD1765 pKa = 5.19DD1766 pKa = 3.92SPINMITNGLAQNTTSTSFEE1786 pKa = 3.92GTLASIGADD1795 pKa = 2.79KK1796 pKa = 10.69TGAHH1800 pKa = 6.15IVLSGSVPSGLTSNGVAITYY1820 pKa = 9.82SLSSDD1825 pKa = 3.26GSTLTAKK1832 pKa = 10.71AGTNTVFTLTGHH1844 pKa = 7.23ADD1846 pKa = 3.02GSYY1849 pKa = 10.65SYY1851 pKa = 11.28DD1852 pKa = 3.25QVRR1855 pKa = 11.84TLDD1858 pKa = 3.76LSVVTSNLQSSVGAGGPQAAYY1879 pKa = 11.2YY1880 pKa = 9.06MYY1882 pKa = 10.08TDD1884 pKa = 4.02GSFGSTEE1891 pKa = 3.95NAKK1894 pKa = 10.44DD1895 pKa = 3.25WAVKK1899 pKa = 8.75ITGSDD1904 pKa = 3.74SINPSTQGMGVSNNLFQTGEE1924 pKa = 3.97TMRR1927 pKa = 11.84FEE1929 pKa = 5.0FDD1931 pKa = 4.14DD1932 pKa = 3.74EE1933 pKa = 4.4HH1934 pKa = 8.05ASTVGGSTPNLAYY1947 pKa = 8.89ATKK1950 pKa = 10.32IGVTDD1955 pKa = 3.75LTGSEE1960 pKa = 4.14SLAWTAYY1967 pKa = 8.54FTDD1970 pKa = 4.8GSHH1973 pKa = 7.14ASGVVTAGSLVSGAFTITSPNGLYY1997 pKa = 10.38LDD1999 pKa = 4.36YY2000 pKa = 11.51VDD2002 pKa = 5.43LAPGSSTSIRR2012 pKa = 11.84LTSVTNYY2019 pKa = 10.35VLDD2022 pKa = 4.1DD2023 pKa = 3.68THH2025 pKa = 7.11TKK2027 pKa = 10.56DD2028 pKa = 4.23LNFGFTAYY2036 pKa = 10.43DD2037 pKa = 3.65GDD2039 pKa = 4.28GDD2041 pKa = 4.08TSNGSLTITSQNSATLTGDD2060 pKa = 3.32ATHH2063 pKa = 6.85TALGGGNANNTLLGTAGNDD2082 pKa = 2.95ILTGGAGNDD2091 pKa = 3.65TLTGGLGADD2100 pKa = 3.53VFRR2103 pKa = 11.84WGVNDD2108 pKa = 4.11HH2109 pKa = 5.97GTAATPSNDD2118 pKa = 2.9VVTDD2122 pKa = 4.05FATTGASHH2130 pKa = 7.28DD2131 pKa = 3.9QLDD2134 pKa = 4.28LRR2136 pKa = 11.84DD2137 pKa = 4.51LLTSVNWTVNAGHH2150 pKa = 6.22TTAQLATEE2158 pKa = 4.33LDD2160 pKa = 4.25GYY2162 pKa = 11.21LSVSEE2167 pKa = 4.72SGTTTTLSVKK2177 pKa = 10.28AGSSSVTEE2185 pKa = 4.6TIQLQNVTDD2194 pKa = 4.33LVDD2197 pKa = 3.72GTHH2200 pKa = 5.8TVSHH2204 pKa = 6.51DD2205 pKa = 3.74VIVYY2209 pKa = 9.14MLDD2212 pKa = 3.2HH2213 pKa = 7.4DD2214 pKa = 5.68LIKK2217 pKa = 10.61HH2218 pKa = 5.95DD2219 pKa = 3.93

Molecular weight:
226.21 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1W1XU88|A0A1W1XU88_9NEIS Membrane fusion protein multidrug efflux system OS=Andreprevotia lacus DSM 23236 OX=1121001 GN=SAMN02745857_02897 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVIRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.58RR14 pKa = 11.84THH16 pKa = 6.01GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.12GGRR28 pKa = 11.84RR29 pKa = 11.84VLNARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.35GRR39 pKa = 11.84ASLSAA44 pKa = 3.83

Molecular weight:
5.04 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4303

0

4303

1369701

39

7105

318.3

34.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.499 ± 0.053

0.933 ± 0.012

5.516 ± 0.03

4.964 ± 0.04

3.454 ± 0.024

7.954 ± 0.036

2.335 ± 0.021

4.531 ± 0.03

3.387 ± 0.034

11.323 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.162 ± 0.02

3.04 ± 0.028

5.117 ± 0.034

4.651 ± 0.028

6.201 ± 0.042

5.345 ± 0.035

5.289 ± 0.052

7.053 ± 0.033

1.571 ± 0.02

2.675 ± 0.028

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski