Celeribacter baekdonensis B30

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Celeribacter; Celeribacter baekdonensis

Average proteome isoelectric point is 6.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4198 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K2JW45|K2JW45_9RHOB Protoporphyrinogen IX oxidase OS=Celeribacter baekdonensis B30 OX=1208323 GN=B30_02380 PE=3 SV=1
MM1 pKa = 6.64TNYY4 pKa = 10.58YY5 pKa = 9.48IVSSNPEE12 pKa = 3.57VHH14 pKa = 7.96DD15 pKa = 4.81DD16 pKa = 4.05GNVNNYY22 pKa = 7.25TQVQAGALTPQEE34 pKa = 3.55GDD36 pKa = 3.0AYY38 pKa = 11.03YY39 pKa = 11.27LDD41 pKa = 5.06GNLSSSLWFYY51 pKa = 11.32GSASFTVNIEE61 pKa = 3.82QSLVTNNLVGGATMWIQGTTNATVNIGAGVDD92 pKa = 3.32ADD94 pKa = 3.98YY95 pKa = 11.8LNISSSGDD103 pKa = 3.19TLTINVDD110 pKa = 3.49DD111 pKa = 4.88GATLGAITAPLTDD124 pKa = 3.11QMTIVAGNDD133 pKa = 2.95VTMNGALIGSNGDD146 pKa = 3.41STVTFGSGATFNSTVNFDD164 pKa = 3.09GWGTLSEE171 pKa = 4.41TGSQTFSVGDD181 pKa = 3.53NAVFEE186 pKa = 4.97YY187 pKa = 10.2GVSMDD192 pKa = 3.76GSYY195 pKa = 8.45THH197 pKa = 6.86NSFSAGVNSTIGDD210 pKa = 4.31DD211 pKa = 3.18IVMNGSGYY219 pKa = 10.39INLTDD224 pKa = 3.74DD225 pKa = 3.28TSGYY229 pKa = 9.46SGSVTVGDD237 pKa = 4.04GSTVQGNVYY246 pKa = 9.92MGGSYY251 pKa = 11.49GDD253 pKa = 3.31MTVAVGNDD261 pKa = 3.26VSVGDD266 pKa = 3.88IAVGGSFNDD275 pKa = 3.03IDD277 pKa = 3.67ITVGDD282 pKa = 4.36RR283 pKa = 11.84VDD285 pKa = 2.93TGYY288 pKa = 10.6IGMGGSDD295 pKa = 3.13INGRR299 pKa = 11.84ILVGSEE305 pKa = 4.06GNVSAIYY312 pKa = 10.44AGGSSSDD319 pKa = 3.0ICVGVGDD326 pKa = 4.36NTNIDD331 pKa = 3.58LSIAMGGSNDD341 pKa = 3.73SYY343 pKa = 11.66ALSLGDD349 pKa = 3.78GVSIGLDD356 pKa = 3.19LSMGGSNNVQNVVMGDD372 pKa = 3.66DD373 pKa = 3.87VSVGTYY379 pKa = 10.28VFMGGVDD386 pKa = 3.53NTNHH390 pKa = 5.75VEE392 pKa = 3.64IGNNFTLGSHH402 pKa = 4.9WTGSISGSDD411 pKa = 3.51YY412 pKa = 11.66LEE414 pKa = 5.8IGDD417 pKa = 4.09NWDD420 pKa = 3.39IGTGIYY426 pKa = 10.08LQGGDD431 pKa = 3.9DD432 pKa = 3.9TLILGTVADD441 pKa = 4.85GVTAYY446 pKa = 9.78IDD448 pKa = 3.81GGLGTDD454 pKa = 3.3ALSLRR459 pKa = 11.84VAAGDD464 pKa = 3.52TGFVSAATEE473 pKa = 4.16AGWTYY478 pKa = 11.55DD479 pKa = 3.28SDD481 pKa = 3.72TGTWSSNGNDD491 pKa = 3.2LTYY494 pKa = 11.28NGVTYY499 pKa = 10.41TSFEE503 pKa = 3.96TAAVVDD509 pKa = 4.33EE510 pKa = 4.71DD511 pKa = 4.12WEE513 pKa = 4.61LVCPVANNIVDD524 pKa = 4.09GTAGDD529 pKa = 4.03DD530 pKa = 3.85VMDD533 pKa = 4.46IGYY536 pKa = 8.6TDD538 pKa = 3.6AQGDD542 pKa = 4.13QIDD545 pKa = 4.4GTDD548 pKa = 3.54GDD550 pKa = 3.98TDD552 pKa = 4.19VIFGYY557 pKa = 10.87AGDD560 pKa = 3.82DD561 pKa = 4.1TINGGAGNDD570 pKa = 4.18TIHH573 pKa = 7.12GGLDD577 pKa = 3.18NDD579 pKa = 5.21TITGGAGDD587 pKa = 4.4DD588 pKa = 4.2SVTGGAGSDD597 pKa = 3.49TLAGGVGADD606 pKa = 3.79VLDD609 pKa = 4.68GGSGDD614 pKa = 4.31DD615 pKa = 4.22SLDD618 pKa = 3.52GGEE621 pKa = 5.42GDD623 pKa = 5.57DD624 pKa = 4.49EE625 pKa = 4.84LLGGLGADD633 pKa = 3.91TLIGGAGADD642 pKa = 3.84TLTGGDD648 pKa = 3.76GADD651 pKa = 4.11LFIVDD656 pKa = 5.31DD657 pKa = 4.81GGDD660 pKa = 3.69TITDD664 pKa = 4.14FDD666 pKa = 4.06ATSGIGDD673 pKa = 4.73DD674 pKa = 5.11DD675 pKa = 4.82EE676 pKa = 6.91SDD678 pKa = 3.59NDD680 pKa = 3.94VVDD683 pKa = 5.26LSTFYY688 pKa = 11.48NEE690 pKa = 3.75TTLAEE695 pKa = 4.02WNAANPTQTYY705 pKa = 10.14ASPLGWLRR713 pKa = 11.84ADD715 pKa = 3.53QGDD718 pKa = 4.12GVLDD722 pKa = 3.85AASGLEE728 pKa = 4.32LYY730 pKa = 10.83SPDD733 pKa = 3.63GNPVTSADD741 pKa = 3.69LNAEE745 pKa = 4.06NTRR748 pKa = 11.84VICFARR754 pKa = 11.84GTRR757 pKa = 11.84IMTPRR762 pKa = 11.84GEE764 pKa = 4.62VEE766 pKa = 3.79IQNLKK771 pKa = 10.67VGDD774 pKa = 3.96NVLTLDD780 pKa = 4.45NGFKK784 pKa = 9.46PIRR787 pKa = 11.84WIGHH791 pKa = 5.4RR792 pKa = 11.84RR793 pKa = 11.84LGAEE797 pKa = 4.92ALDD800 pKa = 4.07AMPKK804 pKa = 9.89LRR806 pKa = 11.84PIRR809 pKa = 11.84IRR811 pKa = 11.84AGALDD816 pKa = 3.55TDD818 pKa = 4.17LPVRR822 pKa = 11.84DD823 pKa = 4.24LVVSPQHH830 pKa = 6.14RR831 pKa = 11.84VLFRR835 pKa = 11.84SPHH838 pKa = 5.63AEE840 pKa = 3.85LMFGTHH846 pKa = 5.62EE847 pKa = 4.16VLLAARR853 pKa = 11.84QLLGLEE859 pKa = 4.75GVCVEE864 pKa = 4.45RR865 pKa = 11.84EE866 pKa = 4.09ARR868 pKa = 11.84EE869 pKa = 3.72VEE871 pKa = 4.15YY872 pKa = 10.08WHH874 pKa = 6.74FLFNRR879 pKa = 11.84HH880 pKa = 5.98EE881 pKa = 4.09IVFAEE886 pKa = 5.04GAASEE891 pKa = 4.19SLYY894 pKa = 10.92TGVEE898 pKa = 4.03ALKK901 pKa = 10.77SLNPEE906 pKa = 3.33ARR908 pKa = 11.84EE909 pKa = 3.91EE910 pKa = 4.0IFALFPEE917 pKa = 5.14LGADD921 pKa = 3.39EE922 pKa = 4.52ATRR925 pKa = 11.84KK926 pKa = 9.46PDD928 pKa = 3.34LARR931 pKa = 11.84PVVNGVVARR940 pKa = 11.84LLVSVNGSGQTANILHH956 pKa = 6.7

Molecular weight: 98.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K2JWU2|K2JWU2_9RHOB Uncharacterized protein OS=Celeribacter baekdonensis B30 OX=1208323 GN=B30_03430 PE=4 SV=1
MM1 pKa = 7.53KK2 pKa = 7.9PTPRR6 pKa = 11.84DD7 pKa = 3.25LVITRR12 pKa = 11.84WGARR16 pKa = 11.84FMGRR20 pKa = 11.84RR21 pKa = 11.84FPCSIGKK28 pKa = 10.06GGIVANKK35 pKa = 9.98RR36 pKa = 11.84EE37 pKa = 4.36GDD39 pKa = 3.41GGTPIGPHH47 pKa = 6.85EE48 pKa = 4.25IAEE51 pKa = 4.3LYY53 pKa = 10.12YY54 pKa = 10.78RR55 pKa = 11.84ADD57 pKa = 3.69RR58 pKa = 11.84VPALNGTEE66 pKa = 3.82IRR68 pKa = 11.84IGDD71 pKa = 4.58LWCDD75 pKa = 3.37ATDD78 pKa = 3.51HH79 pKa = 6.53PRR81 pKa = 11.84YY82 pKa = 9.11NHH84 pKa = 6.91LVRR87 pKa = 11.84APFKK91 pKa = 10.69ASHH94 pKa = 5.66EE95 pKa = 4.14KK96 pKa = 9.25MRR98 pKa = 11.84RR99 pKa = 11.84GDD101 pKa = 3.38RR102 pKa = 11.84LYY104 pKa = 11.38DD105 pKa = 4.11LVLTTNWNWPEE116 pKa = 3.75ATPGKK121 pKa = 10.34GSAIFIHH128 pKa = 6.76RR129 pKa = 11.84WRR131 pKa = 11.84KK132 pKa = 8.14PRR134 pKa = 11.84HH135 pKa = 4.52PTEE138 pKa = 4.0GCVAFRR144 pKa = 11.84ADD146 pKa = 3.42HH147 pKa = 6.11LRR149 pKa = 11.84WIAEE153 pKa = 4.3RR154 pKa = 11.84ISPATRR160 pKa = 11.84LIVRR164 pKa = 4.59

Molecular weight: 18.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4198

0

4198

1288073

19

2756

306.8

33.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.833 ± 0.05

0.891 ± 0.012

6.009 ± 0.032

5.829 ± 0.038

3.867 ± 0.023

8.489 ± 0.039

2.118 ± 0.017

5.431 ± 0.025

3.503 ± 0.029

10.07 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.921 ± 0.016

2.615 ± 0.021

4.962 ± 0.027

3.119 ± 0.02

6.238 ± 0.037

5.437 ± 0.026

5.742 ± 0.028

7.312 ± 0.031

1.334 ± 0.017

2.28 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski