Infectious hypodermal and hematopoietic necrosis virus (IHHNV) (Decapod penstyldensovirus 1)

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Densovirinae; Penstyldensovirus

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9IBP6|Q9IBP6_IHHNV Non-structural protein OS=Infectious hypodermal and hematopoietic necrosis virus OX=1513224 PE=4 SV=1
MM1 pKa = 7.61AKK3 pKa = 10.33DD4 pKa = 3.34ILHH7 pKa = 5.97TRR9 pKa = 11.84QGEE12 pKa = 4.22PEE14 pKa = 4.3SLSEE18 pKa = 4.48LLRR21 pKa = 11.84EE22 pKa = 4.39RR23 pKa = 11.84TNEE26 pKa = 3.91THH28 pKa = 6.69SSQGISPSLLTPGPNQDD45 pKa = 3.87PKK47 pKa = 10.47PTTEE51 pKa = 3.69QLLNMSEE58 pKa = 4.49EE59 pKa = 4.32LFQFSDD65 pKa = 4.19EE66 pKa = 4.49EE67 pKa = 4.99DD68 pKa = 3.55NSQTPPRR75 pKa = 11.84TSTPEE80 pKa = 3.48QTDD83 pKa = 3.3PKK85 pKa = 10.77VCVDD89 pKa = 3.31NLGIRR94 pKa = 11.84EE95 pKa = 4.31GTGNGTIQLGSEE107 pKa = 4.5SEE109 pKa = 4.25TSLGSVGNSNDD120 pKa = 3.5RR121 pKa = 11.84GKK123 pKa = 10.64KK124 pKa = 6.8RR125 pKa = 11.84QRR127 pKa = 11.84GITYY131 pKa = 10.1ISDD134 pKa = 3.57TSDD137 pKa = 2.95SSGSDD142 pKa = 3.58DD143 pKa = 4.09EE144 pKa = 5.38NLGTPHH150 pKa = 6.87RR151 pKa = 11.84NKK153 pKa = 9.66RR154 pKa = 11.84TRR156 pKa = 11.84NSNTTKK162 pKa = 9.75EE163 pKa = 4.33TGGGDD168 pKa = 3.37NRR170 pKa = 11.84RR171 pKa = 11.84HH172 pKa = 5.48QEE174 pKa = 3.68SDD176 pKa = 2.77HH177 pKa = 6.22GSNGNRR183 pKa = 11.84LEE185 pKa = 4.2PTDD188 pKa = 4.16GGEE191 pKa = 4.31SCSSGTQPDD200 pKa = 5.02FIEE203 pKa = 4.72GTPNGPDD210 pKa = 3.15EE211 pKa = 4.25MDD213 pKa = 3.0GRR215 pKa = 11.84RR216 pKa = 11.84LEE218 pKa = 3.88EE219 pKa = 4.15SEE221 pKa = 3.86IDD223 pKa = 3.57KK224 pKa = 10.85QVEE227 pKa = 4.15STTWYY232 pKa = 9.04TFVIRR237 pKa = 11.84EE238 pKa = 4.04KK239 pKa = 9.67PQPRR243 pKa = 11.84RR244 pKa = 11.84LSGRR248 pKa = 11.84TPNFTITDD256 pKa = 4.0HH257 pKa = 6.73GDD259 pKa = 2.86HH260 pKa = 5.68WHH262 pKa = 6.06ITYY265 pKa = 10.5SGHH268 pKa = 5.99PTNKK272 pKa = 7.59TRR274 pKa = 11.84HH275 pKa = 5.82RR276 pKa = 11.84ATILAYY282 pKa = 10.75LGVTFAARR290 pKa = 11.84AEE292 pKa = 4.22AEE294 pKa = 4.06ATTVLVRR301 pKa = 11.84NIKK304 pKa = 10.03RR305 pKa = 11.84WILYY309 pKa = 8.45LIRR312 pKa = 11.84YY313 pKa = 7.88GIEE316 pKa = 3.49RR317 pKa = 11.84LSYY320 pKa = 10.4FGLGHH325 pKa = 7.53AIFKK329 pKa = 10.55RR330 pKa = 11.84IIKK333 pKa = 9.25YY334 pKa = 7.27FQQYY338 pKa = 9.86RR339 pKa = 11.84RR340 pKa = 11.84DD341 pKa = 3.56EE342 pKa = 4.39DD343 pKa = 4.77AVDD346 pKa = 4.96GPCPYY351 pKa = 8.15MTTTRR356 pKa = 11.84EE357 pKa = 3.77DD358 pKa = 3.41RR359 pKa = 11.84AEE361 pKa = 4.17EE362 pKa = 4.12KK363 pKa = 10.47PKK365 pKa = 10.81EE366 pKa = 3.92NSAEE370 pKa = 3.88YY371 pKa = 10.14DD372 pKa = 3.78YY373 pKa = 11.29LQHH376 pKa = 6.98LVKK379 pKa = 9.86TKK381 pKa = 9.44SARR384 pKa = 11.84TVQEE388 pKa = 4.28LVNKK392 pKa = 10.41LDD394 pKa = 3.88DD395 pKa = 4.09EE396 pKa = 4.77EE397 pKa = 5.64YY398 pKa = 9.93KK399 pKa = 10.68QLWTRR404 pKa = 11.84TRR406 pKa = 11.84GQYY409 pKa = 9.99KK410 pKa = 10.45DD411 pKa = 3.35KK412 pKa = 11.13LRR414 pKa = 11.84GILTYY419 pKa = 11.05YY420 pKa = 10.42NNKK423 pKa = 9.52KK424 pKa = 10.26KK425 pKa = 10.87SNQSQLSLITNLQNISKK442 pKa = 10.41RR443 pKa = 11.84KK444 pKa = 8.29PDD446 pKa = 3.96YY447 pKa = 11.73DD448 pKa = 3.19NMQWIKK454 pKa = 11.46YY455 pKa = 7.86MLANNDD461 pKa = 2.63IRR463 pKa = 11.84VPEE466 pKa = 3.87ILAWIIIVADD476 pKa = 3.85KK477 pKa = 11.04KK478 pKa = 10.74LDD480 pKa = 4.15KK481 pKa = 11.06INTLVLQGPTGTGKK495 pKa = 10.59SLTIGALLGKK505 pKa = 10.23LNTGLVTRR513 pKa = 11.84TGDD516 pKa = 3.32SNTFHH521 pKa = 6.75LQNLIGKK528 pKa = 9.11SYY530 pKa = 11.56ALFEE534 pKa = 4.41EE535 pKa = 4.68PRR537 pKa = 11.84ISQITVDD544 pKa = 4.01DD545 pKa = 4.36FKK547 pKa = 11.82LLFEE551 pKa = 4.99GSDD554 pKa = 3.38LEE556 pKa = 4.9VNIKK560 pKa = 9.77HH561 pKa = 5.57QEE563 pKa = 3.88SEE565 pKa = 3.78IMGRR569 pKa = 11.84IPIFISTNKK578 pKa = 10.59DD579 pKa = 2.13IDD581 pKa = 3.87YY582 pKa = 8.44WVPPADD588 pKa = 3.56GKK590 pKa = 10.96ALQTRR595 pKa = 11.84TKK597 pKa = 9.22TFHH600 pKa = 6.65LTRR603 pKa = 11.84QIKK606 pKa = 10.09GLSDD610 pKa = 3.52RR611 pKa = 11.84MNSQYY616 pKa = 11.04DD617 pKa = 3.63INPPPDD623 pKa = 5.19KK624 pKa = 10.18ITSDD628 pKa = 3.66DD629 pKa = 3.76FLGLFQEE636 pKa = 4.62YY637 pKa = 9.77EE638 pKa = 4.23KK639 pKa = 10.94EE640 pKa = 3.65IDD642 pKa = 4.68DD643 pKa = 5.48IIDD646 pKa = 3.14NHH648 pKa = 5.65VRR650 pKa = 11.84RR651 pKa = 11.84FNKK654 pKa = 10.1SKK656 pKa = 10.22PKK658 pKa = 10.48EE659 pKa = 4.2KK660 pKa = 10.03IQEE663 pKa = 4.24GCTT666 pKa = 3.34

Molecular weight: 75.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9IBP6|Q9IBP6_IHHNV Non-structural protein OS=Infectious hypodermal and hematopoietic necrosis virus OX=1513224 PE=4 SV=1
MM1 pKa = 7.45CADD4 pKa = 3.67STRR7 pKa = 11.84ASPRR11 pKa = 11.84KK12 pKa = 9.04RR13 pKa = 11.84SRR15 pKa = 11.84RR16 pKa = 11.84DD17 pKa = 2.94AHH19 pKa = 7.48NEE21 pKa = 3.86DD22 pKa = 4.02EE23 pKa = 4.32EE24 pKa = 4.36HH25 pKa = 7.23AEE27 pKa = 4.38GSSGPDD33 pKa = 3.04PHH35 pKa = 7.45RR36 pKa = 11.84CLQFNTGDD44 pKa = 3.93SIHH47 pKa = 6.5ITFQTRR53 pKa = 11.84RR54 pKa = 11.84YY55 pKa = 10.23FEE57 pKa = 4.23FDD59 pKa = 2.97AANDD63 pKa = 3.83GNFDD67 pKa = 4.09GKK69 pKa = 10.31NLYY72 pKa = 9.9CLPLHH77 pKa = 6.52WMNLYY82 pKa = 10.75LYY84 pKa = 9.21GLKK87 pKa = 10.61SSDD90 pKa = 3.18SSATEE95 pKa = 3.65TQRR98 pKa = 11.84YY99 pKa = 9.58KK100 pKa = 10.15MVKK103 pKa = 10.47SMMKK107 pKa = 7.99TYY109 pKa = 9.6GWKK112 pKa = 8.21VHH114 pKa = 5.67KK115 pKa = 10.34AGVVMHH121 pKa = 6.44SMVPLMKK128 pKa = 10.15DD129 pKa = 3.46LKK131 pKa = 10.83VSGGTSFEE139 pKa = 4.36TLTFTDD145 pKa = 3.65TPYY148 pKa = 11.48LEE150 pKa = 4.37IFKK153 pKa = 9.51DD154 pKa = 3.47TTGLHH159 pKa = 5.71NQLSTKK165 pKa = 10.01EE166 pKa = 3.94ADD168 pKa = 3.15VTLAKK173 pKa = 9.98WIQNPQLVTVQSTAANYY190 pKa = 8.02EE191 pKa = 4.03DD192 pKa = 6.0PIQQFGFMEE201 pKa = 3.91QMRR204 pKa = 11.84TGDD207 pKa = 3.1RR208 pKa = 11.84KK209 pKa = 10.66AYY211 pKa = 8.23TIHH214 pKa = 7.06GDD216 pKa = 3.05TRR218 pKa = 11.84NWYY221 pKa = 9.88GGEE224 pKa = 4.04IPTTGPTFIPKK235 pKa = 9.32WGGQLKK241 pKa = 9.31WDD243 pKa = 4.17KK244 pKa = 10.63PSLGNLVYY252 pKa = 10.1PADD255 pKa = 3.48HH256 pKa = 6.75HH257 pKa = 6.6TNDD260 pKa = 2.99WQQIFMRR267 pKa = 11.84MSPIKK272 pKa = 10.47GPNGDD277 pKa = 4.13EE278 pKa = 4.3LKK280 pKa = 10.86LGCRR284 pKa = 11.84VQADD288 pKa = 4.32FFLHH292 pKa = 6.57LEE294 pKa = 4.12VRR296 pKa = 11.84LPPQGCVASLGMLQYY311 pKa = 11.12LHH313 pKa = 7.0APCTGQLNKK322 pKa = 10.32CYY324 pKa = 10.26IMHH327 pKa = 6.7TNN329 pKa = 3.14

Molecular weight: 37.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1358

329

666

452.7

51.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.535 ± 0.581

1.105 ± 0.411

6.112 ± 0.842

7.216 ± 1.054

3.019 ± 0.43

6.112 ± 1.332

2.946 ± 0.493

5.817 ± 0.95

6.48 ± 0.197

8.689 ± 0.523

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.135 ± 0.814

5.67 ± 0.386

5.744 ± 0.622

5.302 ± 0.385

6.038 ± 0.652

6.48 ± 0.485

9.352 ± 0.507

3.756 ± 0.521

1.694 ± 0.427

2.798 ± 0.675
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski