Eidolon helvum parvovirus 1 isolate Bat/Ghana/-/2009

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Tetraparvovirus; Chiropteran tetraparvovirus 1

Average proteome isoelectric point is 5.96

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H2ESE6|H2ESE6_BTPV1 MARF OS=Eidolon helvum parvovirus 1 (isolate Bat/Ghana/-/2009) OX=1560037 GN=MARF PE=4 SV=1
MM1 pKa = 7.71ASGGVAFFMPTGEE14 pKa = 4.14GGKK17 pKa = 10.18AISKK21 pKa = 10.25LYY23 pKa = 10.79DD24 pKa = 3.41GAVTGWSQSHH34 pKa = 6.4LRR36 pKa = 11.84HH37 pKa = 4.44GHH39 pKa = 4.75YY40 pKa = 10.14RR41 pKa = 11.84ATALSGLVYY50 pKa = 10.46QKK52 pKa = 11.23AFEE55 pKa = 4.33NLDD58 pKa = 3.42AFAKK62 pKa = 10.14HH63 pKa = 6.19LPPSLRR69 pKa = 11.84LVQTLYY75 pKa = 11.59NNISKK80 pKa = 9.65QRR82 pKa = 11.84NKK84 pKa = 9.17TANTEE89 pKa = 3.88WWWRR93 pKa = 11.84VYY95 pKa = 10.0TDD97 pKa = 3.54CTRR100 pKa = 11.84LLLTVAQPQAADD112 pKa = 3.38ALRR115 pKa = 11.84RR116 pKa = 11.84AWNGTSPLRR125 pKa = 11.84PPAQQVLQNVYY136 pKa = 7.93MLAYY140 pKa = 9.56NSHH143 pKa = 6.34IPSEE147 pKa = 4.13EE148 pKa = 3.95DD149 pKa = 3.11LNTFFDD155 pKa = 4.02EE156 pKa = 4.49SVLGSVSGDD165 pKa = 3.3PEE167 pKa = 3.52NFAFVKK173 pKa = 9.94QAVVSAFHH181 pKa = 6.79PADD184 pKa = 3.67GGAATEE190 pKa = 4.1QRR192 pKa = 11.84SDD194 pKa = 3.66VPEE197 pKa = 4.49SPSPPSEE204 pKa = 4.1SDD206 pKa = 2.75HH207 pKa = 6.05SQPSGGGLLVPGYY220 pKa = 10.84NYY222 pKa = 10.28VGPGNPLDD230 pKa = 4.14NGPPKK235 pKa = 10.92GPVDD239 pKa = 3.48EE240 pKa = 4.81AARR243 pKa = 11.84NHH245 pKa = 5.92DD246 pKa = 3.31RR247 pKa = 11.84RR248 pKa = 11.84YY249 pKa = 11.27DD250 pKa = 3.49EE251 pKa = 4.53MLSHH255 pKa = 7.15GDD257 pKa = 3.43VPYY260 pKa = 10.98LDD262 pKa = 4.03SQGVDD267 pKa = 2.97QLMTKK272 pKa = 10.17EE273 pKa = 4.24IEE275 pKa = 4.22DD276 pKa = 3.94AEE278 pKa = 4.48KK279 pKa = 10.75KK280 pKa = 10.46EE281 pKa = 3.93PLGPIDD287 pKa = 4.78ALVANAARR295 pKa = 11.84ALWKK299 pKa = 10.64GKK301 pKa = 7.71EE302 pKa = 4.11TLASVIGDD310 pKa = 3.27QGHH313 pKa = 5.49QVLPPNPPSVDD324 pKa = 3.27QGSHH328 pKa = 6.27LGSKK332 pKa = 10.35RR333 pKa = 11.84PLEE336 pKa = 4.11EE337 pKa = 4.16SEE339 pKa = 4.56EE340 pKa = 4.3NSDD343 pKa = 3.94SLAKK347 pKa = 10.32KK348 pKa = 9.46FRR350 pKa = 11.84PGSSPKK356 pKa = 10.12SDD358 pKa = 4.1LEE360 pKa = 4.23PSGGTAPTAPPKK372 pKa = 10.19GATMSTEE379 pKa = 4.11AEE381 pKa = 4.29GSGGGIKK388 pKa = 10.19VKK390 pKa = 10.67ALWTGGTEE398 pKa = 4.18FSDD401 pKa = 3.78TSIHH405 pKa = 5.85TSHH408 pKa = 6.51TRR410 pKa = 11.84VALLADD416 pKa = 4.48RR417 pKa = 11.84GTYY420 pKa = 8.58MPIYY424 pKa = 10.12RR425 pKa = 11.84PGEE428 pKa = 4.2TTSVIQPLLGMVTPYY443 pKa = 10.98SYY445 pKa = 10.96IDD447 pKa = 3.74VNSLSAHH454 pKa = 5.52LTPRR458 pKa = 11.84DD459 pKa = 3.66FQQLIDD465 pKa = 4.08EE466 pKa = 4.57YY467 pKa = 11.71GEE469 pKa = 3.95IRR471 pKa = 11.84PKK473 pKa = 10.79SLTIGISGIVVKK485 pKa = 10.53DD486 pKa = 3.25VSVNTTGTAVTDD498 pKa = 3.77SGSGGITVFADD509 pKa = 2.94EE510 pKa = 5.56GYY512 pKa = 10.61DD513 pKa = 3.5YY514 pKa = 10.84PYY516 pKa = 11.53VLGHH520 pKa = 6.2NQDD523 pKa = 3.85TLPGHH528 pKa = 7.2LPGEE532 pKa = 4.69HH533 pKa = 6.1YY534 pKa = 11.06VLPQYY539 pKa = 10.85AYY541 pKa = 7.83CTRR544 pKa = 11.84GRR546 pKa = 11.84EE547 pKa = 3.9VVNANKK553 pKa = 9.73IDD555 pKa = 4.13IIQDD559 pKa = 2.9HH560 pKa = 5.95RR561 pKa = 11.84TDD563 pKa = 4.11FFLLEE568 pKa = 4.02HH569 pKa = 7.08HH570 pKa = 7.43DD571 pKa = 3.95AXCLNSGDD579 pKa = 4.23TWSHH583 pKa = 6.09TYY585 pKa = 10.67SFPDD589 pKa = 3.35LPFRR593 pKa = 11.84RR594 pKa = 11.84LTYY597 pKa = 10.04PSQHH601 pKa = 6.79LYY603 pKa = 9.59AQHH606 pKa = 6.06NPQMKK611 pKa = 9.74SRR613 pKa = 11.84LGVFRR618 pKa = 11.84SVDD621 pKa = 3.66QNGDD625 pKa = 3.78PAWQRR630 pKa = 11.84LRR632 pKa = 11.84GSDD635 pKa = 4.25IGQLPCNYY643 pKa = 10.11LPGPQANLPTTSDD656 pKa = 3.75FQKK659 pKa = 10.72GDD661 pKa = 3.24SMLPAAIGDD670 pKa = 4.72PITGDD675 pKa = 3.25RR676 pKa = 11.84YY677 pKa = 8.09TVTPLVHH684 pKa = 6.16QPWSMVHH691 pKa = 7.23DD692 pKa = 4.96EE693 pKa = 4.5YY694 pKa = 11.76NNTGQRR700 pKa = 11.84TQSVVSTVGSVAYY713 pKa = 8.96MPRR716 pKa = 11.84KK717 pKa = 9.77HH718 pKa = 6.21EE719 pKa = 4.07EE720 pKa = 4.34SYY722 pKa = 11.4GSPNDD727 pKa = 3.6ALTEE731 pKa = 3.79ITTPMRR737 pKa = 11.84VVQEE741 pKa = 3.99QADD744 pKa = 4.23LVSSRR749 pKa = 11.84LGHH752 pKa = 5.85TFMIPSFSRR761 pKa = 11.84KK762 pKa = 9.45AGSASTTTYY771 pKa = 10.51NEE773 pKa = 3.73PMFPLLPGAVWNPNPLTYY791 pKa = 10.47DD792 pKa = 3.39CQIWCKK798 pKa = 10.76VPDD801 pKa = 4.11TEE803 pKa = 5.14CKK805 pKa = 10.51FMTQYY810 pKa = 11.1PLLGGWGMDD819 pKa = 3.83TPPPMIFLRR828 pKa = 11.84IRR830 pKa = 11.84RR831 pKa = 11.84QPGPPGPGAHH841 pKa = 5.63TVPGSTLNQYY851 pKa = 10.73VIFHH855 pKa = 6.48LHH857 pKa = 5.43YY858 pKa = 11.1SMEE861 pKa = 4.22FEE863 pKa = 3.9VRR865 pKa = 11.84RR866 pKa = 11.84RR867 pKa = 11.84KK868 pKa = 9.8RR869 pKa = 11.84SRR871 pKa = 11.84RR872 pKa = 11.84HH873 pKa = 4.96NPEE876 pKa = 3.3MPAPFPQTWSGKK888 pKa = 8.12MPYY891 pKa = 9.11TLSTDD896 pKa = 3.29GKK898 pKa = 10.55SGPEE902 pKa = 3.72YY903 pKa = 10.54NVPRR907 pKa = 11.84DD908 pKa = 3.17QWVARR913 pKa = 11.84NYY915 pKa = 10.72SQLLL919 pKa = 3.6

Molecular weight: 100.92 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H2ESE7|H2ESE7_BTPV1 Putative capsid protein VP2 OS=Eidolon helvum parvovirus 1 (isolate Bat/Ghana/-/2009) OX=1560037 PE=3 SV=1
MM1 pKa = 7.86EE2 pKa = 5.18EE3 pKa = 4.31PLLNSALTSLKK14 pKa = 10.54VLAPLVNQTIHH25 pKa = 6.54SLAEE29 pKa = 4.15VVSLSPATIMWVLVILWIMAPLRR52 pKa = 11.84AQWMRR57 pKa = 11.84QLAIMTEE64 pKa = 4.07GMTKK68 pKa = 10.31CFPTGTSPTT77 pKa = 3.75

Molecular weight: 8.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2232

77

919

558.0

62.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.944 ± 1.141

1.344 ± 0.407

5.421 ± 0.469

5.242 ± 0.813

3.226 ± 0.3

7.93 ± 0.603

2.912 ± 0.475

3.584 ± 0.403

3.405 ± 0.37

8.244 ± 0.6

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.419 ± 0.583

3.539 ± 0.303

8.065 ± 0.9

4.077 ± 0.564

5.914 ± 0.68

7.706 ± 0.337

6.765 ± 1.054

6.676 ± 0.375

2.509 ± 0.729

3.987 ± 0.426
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski