Draconibacterium orientale

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Marinilabiliales; Prolixibacteraceae; Draconibacterium

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3940 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|X5DM66|X5DM66_9BACT Hemoglobin/transferrin/lactoferrin receptor protein OS=Draconibacterium orientale OX=1168034 GN=FH5T_06340 PE=3 SV=1
MM1 pKa = 7.61SIYY4 pKa = 10.44GYY6 pKa = 9.38SKK8 pKa = 10.95KK9 pKa = 10.64LVFLFAMVLIAGFVMAQKK27 pKa = 7.67TTTLVQSGNSNIATVDD43 pKa = 3.31QMACLSGAVNSIFATQSGNWNTLTTFQKK71 pKa = 10.81GWDD74 pKa = 3.72NNIDD78 pKa = 3.79LLQSGDD84 pKa = 3.85HH85 pKa = 5.95NTADD89 pKa = 3.88MTQEE93 pKa = 3.75TCDD96 pKa = 3.68YY97 pKa = 10.79DD98 pKa = 4.84DD99 pKa = 3.34SHH101 pKa = 7.9GYY103 pKa = 7.97NTAKK107 pKa = 10.08VVQYY111 pKa = 11.54GDD113 pKa = 3.89GNTANLSQMEE123 pKa = 4.4EE124 pKa = 4.18DD125 pKa = 4.94GGLADD130 pKa = 3.92IDD132 pKa = 4.46YY133 pKa = 11.11VGGWLPLPILPEE145 pKa = 3.96RR146 pKa = 11.84DD147 pKa = 3.1RR148 pKa = 11.84SINEE152 pKa = 3.61ATTTQSGNSNTYY164 pKa = 9.92NLAQGRR170 pKa = 11.84EE171 pKa = 4.02NYY173 pKa = 10.03IPDD176 pKa = 3.36NTSYY180 pKa = 9.83LTQSGNSNAADD191 pKa = 3.26IDD193 pKa = 3.62QLGFNNYY200 pKa = 9.77SEE202 pKa = 4.25IRR204 pKa = 11.84QTGDD208 pKa = 2.37WNTADD213 pKa = 4.7LLQDD217 pKa = 3.67GADD220 pKa = 3.29ISLTAVNKK228 pKa = 10.43DD229 pKa = 3.62EE230 pKa = 4.49SYY232 pKa = 9.05SWQIGVHH239 pKa = 4.61STLNVKK245 pKa = 9.73QVGDD249 pKa = 3.52VDD251 pKa = 3.83EE252 pKa = 4.49QLAEE256 pKa = 4.14SRR258 pKa = 11.84QNGSGNTTNILQVGVTMQNVDD279 pKa = 2.6AWQYY283 pKa = 8.08GTDD286 pKa = 4.08VIDD289 pKa = 3.66IDD291 pKa = 4.02QVDD294 pKa = 4.14VEE296 pKa = 4.46PEE298 pKa = 3.79EE299 pKa = 4.1

Molecular weight: 32.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|X5DLY7|X5DLY7_9BACT Curlin associated repeat-containing protein OS=Draconibacterium orientale OX=1168034 GN=FH5T_18445 PE=3 SV=1
MM1 pKa = 7.6LRR3 pKa = 11.84TDD5 pKa = 3.53CRR7 pKa = 11.84KK8 pKa = 10.16LKK10 pKa = 10.65NSNQRR15 pKa = 11.84KK16 pKa = 8.04QLILNLPQVPEE27 pKa = 3.98VSFKK31 pKa = 10.88RR32 pKa = 11.84VFLRR36 pKa = 11.84PQLTEE41 pKa = 3.66NGFKK45 pKa = 10.33RR46 pKa = 11.84VSLLHH51 pKa = 5.64QVTEE55 pKa = 4.34EE56 pKa = 4.0GFKK59 pKa = 10.68RR60 pKa = 11.84IFARR64 pKa = 11.84RR65 pKa = 11.84QINRR69 pKa = 11.84VDD71 pKa = 3.36TKK73 pKa = 10.94RR74 pKa = 11.84IFSCAQHH81 pKa = 6.19IAGSTKK87 pKa = 10.3HH88 pKa = 6.51ILTGHH93 pKa = 5.61CHH95 pKa = 5.64MGIKK99 pKa = 10.19NISFYY104 pKa = 11.34SVVIQKK110 pKa = 8.54TGNSHH115 pKa = 6.82VEE117 pKa = 3.32ICYY120 pKa = 10.21LRR122 pKa = 11.84SGPFFTLAYY131 pKa = 10.27FMAKK135 pKa = 9.74NVV137 pKa = 3.29

Molecular weight: 15.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3940

0

3940

1407688

48

3688

357.3

40.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.891 ± 0.034

0.844 ± 0.016

5.585 ± 0.033

7.037 ± 0.037

5.064 ± 0.028

6.758 ± 0.04

1.806 ± 0.015

7.275 ± 0.039

7.035 ± 0.047

9.135 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.411 ± 0.018

5.702 ± 0.031

3.662 ± 0.023

3.504 ± 0.025

3.872 ± 0.024

6.091 ± 0.028

5.438 ± 0.04

6.544 ± 0.028

1.271 ± 0.016

4.074 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski