Spider monkey simian foamy virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Simiispumavirus

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A8HC81|A8HC81_9RETR Bel2 OS=Spider monkey simian foamy virus OX=2170200 GN=bel2 PE=4 SV=1
MM1 pKa = 8.15ASQQEE6 pKa = 4.43KK7 pKa = 10.78NSIVPEE13 pKa = 4.24DD14 pKa = 3.95DD15 pKa = 3.54FMEE18 pKa = 4.37EE19 pKa = 3.54LRR21 pKa = 11.84AFLAEE26 pKa = 4.37FPIAEE31 pKa = 4.38QPLEE35 pKa = 4.41DD36 pKa = 5.61DD37 pKa = 3.88VFQAEE42 pKa = 4.74GQQPSQFLEE51 pKa = 4.48DD52 pKa = 4.06PGEE55 pKa = 4.57GPSGASAQAGASSGPPKK72 pKa = 10.73VSGKK76 pKa = 9.0LWNMMAHH83 pKa = 6.44HH84 pKa = 7.42PNRR87 pKa = 11.84GTTSHH92 pKa = 6.64GPDD95 pKa = 3.42EE96 pKa = 4.97PPTGRR101 pKa = 11.84EE102 pKa = 3.42PRR104 pKa = 11.84LRR106 pKa = 11.84WLQEE110 pKa = 3.26ARR112 pKa = 11.84MEE114 pKa = 3.93TAYY117 pKa = 9.87IRR119 pKa = 11.84FEE121 pKa = 3.97KK122 pKa = 10.61DD123 pKa = 2.78LEE125 pKa = 4.5KK126 pKa = 10.84FFPTPEE132 pKa = 3.61QRR134 pKa = 11.84EE135 pKa = 4.04FFIQRR140 pKa = 11.84AIITAAGYY148 pKa = 10.43KK149 pKa = 9.45PDD151 pKa = 3.6LAIYY155 pKa = 7.3TAHH158 pKa = 6.51NGWYY162 pKa = 10.38ACIQPHH168 pKa = 5.94TGDD171 pKa = 3.59LGEE174 pKa = 4.63KK175 pKa = 9.65YY176 pKa = 9.56EE177 pKa = 4.62VYY179 pKa = 10.5YY180 pKa = 10.98KK181 pKa = 10.57CLKK184 pKa = 10.09CGNEE188 pKa = 3.63QWDD191 pKa = 3.91PLLYY195 pKa = 10.68DD196 pKa = 3.91WDD198 pKa = 4.3PSVLMFLRR206 pKa = 11.84AWWKK210 pKa = 8.46TPHH213 pKa = 6.31TSSPLTAMRR222 pKa = 11.84RR223 pKa = 11.84HH224 pKa = 6.44DD225 pKa = 3.95AVCAGIYY232 pKa = 9.82SDD234 pKa = 4.52SSSSTEE240 pKa = 3.66PPKK243 pKa = 10.36RR244 pKa = 11.84RR245 pKa = 11.84QRR247 pKa = 11.84GDD249 pKa = 3.15PGHH252 pKa = 6.75RR253 pKa = 11.84WGAYY257 pKa = 8.88KK258 pKa = 9.59RR259 pKa = 11.84TFDD262 pKa = 4.85SGPLEE267 pKa = 4.04QLVLTHH273 pKa = 6.2TCAYY277 pKa = 5.07TTEE280 pKa = 4.0WPEE283 pKa = 3.76PKK285 pKa = 9.65RR286 pKa = 11.84IHH288 pKa = 6.82LGDD291 pKa = 4.46LEE293 pKa = 4.87TVCPALPDD301 pKa = 4.27PGEE304 pKa = 4.46GGTNSEE310 pKa = 5.07MEE312 pKa = 4.01PQYY315 pKa = 11.09QQGSWTFDD323 pKa = 3.03QQ324 pKa = 4.84

Molecular weight: 36.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A8HC78|A8HC78_9RETR Pr125Pol OS=Spider monkey simian foamy virus OX=2170200 GN=pol PE=4 SV=1
MM1 pKa = 7.33AQGNQPEE8 pKa = 4.94HH9 pKa = 7.77IDD11 pKa = 3.55IGHH14 pKa = 6.22LTILLRR20 pKa = 11.84EE21 pKa = 4.38NGLPTNPPHH30 pKa = 5.13GTEE33 pKa = 3.86YY34 pKa = 10.71AVRR37 pKa = 11.84MTEE40 pKa = 4.31GWWGDD45 pKa = 3.46YY46 pKa = 11.19ARR48 pKa = 11.84FTVIRR53 pKa = 11.84VAFQDD58 pKa = 3.6NQGNPLPRR66 pKa = 11.84PEE68 pKa = 3.87WEE70 pKa = 4.2YY71 pKa = 10.47INRR74 pKa = 11.84DD75 pKa = 3.33VRR77 pKa = 11.84PLNDD81 pKa = 4.26SIIGCTFRR89 pKa = 11.84QAQQAFNNIDD99 pKa = 3.77LARR102 pKa = 11.84TPSRR106 pKa = 11.84YY107 pKa = 10.02GPLSNGLFLITDD119 pKa = 4.29PEE121 pKa = 4.28WLTFNPLSAVEE132 pKa = 4.63IADD135 pKa = 5.39LDD137 pKa = 3.87DD138 pKa = 3.94QEE140 pKa = 5.27IRR142 pKa = 11.84DD143 pKa = 4.3FLAHH147 pKa = 5.87ATIVLDD153 pKa = 3.61NVMADD158 pKa = 3.19VVIQQRR164 pKa = 11.84EE165 pKa = 4.15IEE167 pKa = 4.94DD168 pKa = 3.47LTKK171 pKa = 10.83TNLRR175 pKa = 11.84LRR177 pKa = 11.84NALASSGTYY186 pKa = 9.48QPIGMPIAQSSPAGPSASVAGPHH209 pKa = 5.64MPAMPSVPYY218 pKa = 10.48ISAIPSAPPAPIPVAPAAAPPLGPLPSAPAPPVLPVIQPNTFGTDD263 pKa = 3.24GNGYY267 pKa = 7.18TAVGPVPVLPIAQIKK282 pKa = 9.55AVIGEE287 pKa = 4.34APTDD291 pKa = 3.44ARR293 pKa = 11.84QIPLWVAKK301 pKa = 9.76HH302 pKa = 5.27AAAIEE307 pKa = 4.52GTFPTGSADD316 pKa = 3.29VRR318 pKa = 11.84CRR320 pKa = 11.84VLNALLTSHH329 pKa = 6.74GGMTLSPNEE338 pKa = 4.21CGTWSLAAAALYY350 pKa = 9.59QRR352 pKa = 11.84IYY354 pKa = 11.23GVIPLHH360 pKa = 6.64DD361 pKa = 5.1LPHH364 pKa = 6.12TMAEE368 pKa = 4.07VARR371 pKa = 11.84RR372 pKa = 11.84EE373 pKa = 4.41GILVAFNMGMTFTNNSFDD391 pKa = 4.06VVWGIIRR398 pKa = 11.84PLLPGQASVAMLQGYY413 pKa = 9.51LDD415 pKa = 3.76QYY417 pKa = 11.18QGQQQKK423 pKa = 10.29AQAFPTLLRR432 pKa = 11.84RR433 pKa = 11.84TFEE436 pKa = 4.37TLGLNYY442 pKa = 9.94LGQSIRR448 pKa = 11.84SNQPARR454 pKa = 11.84TSGSVAGSITQGRR467 pKa = 11.84GRR469 pKa = 11.84GQPRR473 pKa = 11.84SRR475 pKa = 11.84PPNRR479 pKa = 11.84ASNRR483 pKa = 11.84SNNPPRR489 pKa = 11.84PPPPRR494 pKa = 11.84SQEE497 pKa = 4.07QQPSPAGRR505 pKa = 11.84GSSSSSAPPQRR516 pKa = 11.84SGYY519 pKa = 8.17NLRR522 pKa = 11.84QQINRR527 pKa = 11.84PQRR530 pKa = 11.84LGGGPNPYY538 pKa = 10.18RR539 pKa = 11.84NLEE542 pKa = 3.82NRR544 pKa = 11.84NIPRR548 pKa = 11.84SEE550 pKa = 4.08TVPSSRR556 pKa = 11.84RR557 pKa = 11.84AEE559 pKa = 3.93TSEE562 pKa = 4.02TNRR565 pKa = 11.84PNQARR570 pKa = 11.84GGQQGSSNRR579 pKa = 11.84NQTRR583 pKa = 11.84SINTVRR589 pKa = 11.84ASDD592 pKa = 3.75SQVIPSAPPAEE603 pKa = 4.35TNPAATAVTPNGPNQHH619 pKa = 6.39SGRR622 pKa = 11.84NN623 pKa = 3.57

Molecular weight: 67.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3349

268

1148

669.8

75.42

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.271 ± 0.943

1.583 ± 0.699

4.598 ± 0.405

5.524 ± 0.777

2.717 ± 0.262

5.673 ± 0.698

2.448 ± 0.242

6.659 ± 0.645

5.464 ± 1.248

9.645 ± 0.81

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.732 ± 0.256

5.046 ± 0.668

7.943 ± 1.037

5.345 ± 0.32

4.897 ± 0.727

6.42 ± 0.445

7.077 ± 0.344

5.255 ± 0.537

2.21 ± 0.346

3.494 ± 0.366
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski