Klebsiella phage Kund-ULIP54

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Przondovirus; unclassified Przondovirus

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 46 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P6PHU1|A0A4P6PHU1_9CAUD Uncharacterized protein OS=Klebsiella phage Kund-ULIP54 OX=2307017 GN=D3A57_0013 PE=4 SV=1
MM1 pKa = 5.82VTYY4 pKa = 9.61YY5 pKa = 11.12VYY7 pKa = 10.86VNQMEE12 pKa = 4.51YY13 pKa = 11.07FEE15 pKa = 6.82ADD17 pKa = 3.33TLEE20 pKa = 4.08EE21 pKa = 4.75AIRR24 pKa = 11.84LCDD27 pKa = 3.87SVPGSHH33 pKa = 6.89VEE35 pKa = 4.2DD36 pKa = 3.71SVLDD40 pKa = 3.69EE41 pKa = 4.3VIYY44 pKa = 10.88ANRR47 pKa = 3.66

Molecular weight: 5.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P6PMT4|A0A4P6PMT4_9CAUD Uncharacterized protein OS=Klebsiella phage Kund-ULIP54 OX=2307017 GN=D3A57_0015 PE=4 SV=1
MM1 pKa = 7.29SQRR4 pKa = 11.84TNLKK8 pKa = 9.79KK9 pKa = 10.34AFKK12 pKa = 8.77IARR15 pKa = 11.84MVTSYY20 pKa = 11.38GAGEE24 pKa = 4.19KK25 pKa = 8.87RR26 pKa = 11.84TKK28 pKa = 10.51RR29 pKa = 11.84ILAASAGRR37 pKa = 11.84LPARR41 pKa = 11.84HH42 pKa = 6.32RR43 pKa = 11.84KK44 pKa = 8.1WVMQQVYY51 pKa = 9.5VEE53 pKa = 4.94LYY55 pKa = 8.87HH56 pKa = 6.92PEE58 pKa = 4.93RR59 pKa = 11.84IPDD62 pKa = 4.01GYY64 pKa = 10.13IWSPVGWKK72 pKa = 9.97RR73 pKa = 11.84VATNN77 pKa = 3.3

Molecular weight: 8.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

46

0

46

12426

40

1321

270.1

30.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.062 ± 0.528

0.934 ± 0.154

6.293 ± 0.18

7.09 ± 0.46

3.589 ± 0.169

7.951 ± 0.396

1.714 ± 0.23

4.861 ± 0.178

6.599 ± 0.383

8.048 ± 0.326

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.599 ± 0.16

4.201 ± 0.271

3.694 ± 0.167

4.338 ± 0.341

5.633 ± 0.254

6.06 ± 0.348

5.746 ± 0.31

6.784 ± 0.369

1.392 ± 0.187

3.412 ± 0.21
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski