Simian adenovirus 3

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus A

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 34 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q695Q3|Q695Q3_9ADEN Isoform of Q695Q7 E4 ORF1 OS=Simian adenovirus 3 OX=38420 GN=E4 PE=4 SV=1
MM1 pKa = 7.87RR2 pKa = 11.84NFLLSPGLPATVAAEE17 pKa = 3.97LLEE20 pKa = 5.42DD21 pKa = 3.79IVTGALGDD29 pKa = 3.78EE30 pKa = 4.42PQVISHH36 pKa = 6.57FCEE39 pKa = 4.58DD40 pKa = 4.2FSLHH44 pKa = 6.83DD45 pKa = 5.55LYY47 pKa = 11.28DD48 pKa = 4.02IDD50 pKa = 5.51PGVEE54 pKa = 4.09GQADD58 pKa = 3.67EE59 pKa = 4.34WLEE62 pKa = 4.07SVDD65 pKa = 5.06GFFPDD70 pKa = 4.93AMLLEE75 pKa = 5.06ADD77 pKa = 5.18LPPSHH82 pKa = 6.94NSNTEE87 pKa = 3.9PEE89 pKa = 4.37SAAIPQLSSGEE100 pKa = 4.2LDD102 pKa = 3.56LACYY106 pKa = 7.85EE107 pKa = 4.29TMPPEE112 pKa = 4.3SDD114 pKa = 4.0EE115 pKa = 4.2EE116 pKa = 4.34DD117 pKa = 3.49SGISNPTDD125 pKa = 3.38YY126 pKa = 10.37MVSKK130 pKa = 10.84AIAILKK136 pKa = 10.16EE137 pKa = 4.3DD138 pKa = 5.31DD139 pKa = 4.82DD140 pKa = 6.93DD141 pKa = 7.13GDD143 pKa = 4.14DD144 pKa = 4.83GFRR147 pKa = 11.84LDD149 pKa = 4.08APAVPGRR156 pKa = 11.84DD157 pKa = 3.41CKK159 pKa = 10.14SCEE162 pKa = 3.74YY163 pKa = 10.35HH164 pKa = 7.11RR165 pKa = 11.84EE166 pKa = 4.08RR167 pKa = 11.84TGDD170 pKa = 3.4PCMLCSLCYY179 pKa = 10.36LRR181 pKa = 11.84LNAAFVYY188 pKa = 10.67SPVSDD193 pKa = 3.8VEE195 pKa = 4.59EE196 pKa = 4.72PDD198 pKa = 3.39STTGNEE204 pKa = 4.11EE205 pKa = 4.27EE206 pKa = 5.01KK207 pKa = 10.6PSPPKK212 pKa = 9.52LTQRR216 pKa = 11.84CRR218 pKa = 11.84PNILRR223 pKa = 11.84PSAQRR228 pKa = 11.84VSSRR232 pKa = 11.84KK233 pKa = 8.93RR234 pKa = 11.84AAVNCIEE241 pKa = 5.07DD242 pKa = 4.13LLEE245 pKa = 4.59EE246 pKa = 4.21PTEE249 pKa = 4.11PLDD252 pKa = 4.98LSLKK256 pKa = 10.28RR257 pKa = 11.84PRR259 pKa = 11.84PQQ261 pKa = 3.17

Molecular weight: 28.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q695S7|Q695S7_9ADEN Penton protein OS=Simian adenovirus 3 OX=38420 GN=L2 PE=2 SV=1
MM1 pKa = 7.65GKK3 pKa = 8.39LTCRR7 pKa = 11.84LRR9 pKa = 11.84MAVPGYY15 pKa = 9.66RR16 pKa = 11.84GRR18 pKa = 11.84SRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84TLGGSGLRR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84AVHH37 pKa = 6.26RR38 pKa = 11.84RR39 pKa = 11.84LKK41 pKa = 10.98GGILPALIPIIAAAIGAIPGIASVAVQASQRR72 pKa = 11.84HH73 pKa = 4.3

Molecular weight: 7.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

16

34

11135

73

1169

327.5

36.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.921 ± 0.423

1.94 ± 0.282

4.733 ± 0.277

6.098 ± 0.536

4.041 ± 0.349

6.107 ± 0.373

2.371 ± 0.243

3.96 ± 0.268

3.404 ± 0.329

9.897 ± 0.534

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.209 ± 0.241

4.652 ± 0.513

6.87 ± 0.346

4.41 ± 0.232

7.319 ± 0.608

6.87 ± 0.337

5.855 ± 0.404

6.412 ± 0.38

1.383 ± 0.085

3.547 ± 0.308
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski