Gulosibacter molinativorax

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Microbacteriaceae; Gulosibacter

Average proteome isoelectric point is 5.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2P7AFA5|A0A2P7AFA5_9MICO DUF3093 domain-containing protein OS=Gulosibacter molinativorax OX=256821 GN=GMOLON4_07830 PE=4 SV=1
MM1 pKa = 6.5QRR3 pKa = 11.84RR4 pKa = 11.84RR5 pKa = 11.84IANRR9 pKa = 11.84MWLAGAAVAALLLSGCQQVSQSDD32 pKa = 3.64QTEE35 pKa = 4.12VDD37 pKa = 3.33LGTPVAGEE45 pKa = 3.96VPEE48 pKa = 4.58GVFEE52 pKa = 4.3GTTLTFAGSGGIFQDD67 pKa = 3.96GQAAAAWDD75 pKa = 3.91PFAEE79 pKa = 4.27QTGATFLQDD88 pKa = 3.64AYY90 pKa = 11.21DD91 pKa = 4.21PGKK94 pKa = 10.32LKK96 pKa = 11.27AMVDD100 pKa = 3.72SGNTTWDD107 pKa = 3.8LVNATQFDD115 pKa = 3.9TAQYY119 pKa = 10.65CGTLYY124 pKa = 11.07EE125 pKa = 4.42EE126 pKa = 5.32LDD128 pKa = 3.64YY129 pKa = 11.67SQIDD133 pKa = 3.46ISNVPEE139 pKa = 3.93GTITDD144 pKa = 3.83DD145 pKa = 4.46CMVPQILYY153 pKa = 11.0GLVLVYY159 pKa = 9.97NTDD162 pKa = 3.32TFGDD166 pKa = 3.95NPPTTAADD174 pKa = 3.83FFDD177 pKa = 4.0TEE179 pKa = 4.35KK180 pKa = 11.01FPGQRR185 pKa = 11.84TVSASPYY192 pKa = 9.66VDD194 pKa = 2.97PQMFEE199 pKa = 4.13FAMVADD205 pKa = 5.12DD206 pKa = 5.15KK207 pKa = 11.03DD208 pKa = 4.12TSSVTADD215 pKa = 4.55DD216 pKa = 4.36IVPALDD222 pKa = 3.38KK223 pKa = 11.07YY224 pKa = 11.17RR225 pKa = 11.84EE226 pKa = 4.22IEE228 pKa = 4.21DD229 pKa = 4.77SLITWTSGAQAQQQLEE245 pKa = 4.25SGEE248 pKa = 4.17AVMGLVWSGRR258 pKa = 11.84GYY260 pKa = 10.74GAANAGAPVAAMWDD274 pKa = 3.34EE275 pKa = 3.92WMVMVDD281 pKa = 3.08STAIPKK287 pKa = 10.34GSQNLQAAHH296 pKa = 6.16SAINYY301 pKa = 9.21YY302 pKa = 10.51GGAEE306 pKa = 4.1QQTKK310 pKa = 9.23MSEE313 pKa = 4.05LTSYY317 pKa = 11.46GPINVNAKK325 pKa = 9.52PDD327 pKa = 3.59LSGEE331 pKa = 4.15LGNWMTTDD339 pKa = 3.44HH340 pKa = 7.63LDD342 pKa = 3.32TGHH345 pKa = 6.21YY346 pKa = 9.53PNVDD350 pKa = 3.81FWVEE354 pKa = 3.96NYY356 pKa = 9.18DD357 pKa = 3.77ALQSAWSSWVTTGG370 pKa = 4.48

Molecular weight: 39.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2P7AEK4|A0A2P7AEK4_9MICO Type II toxin-antitoxin system RelE/ParE family toxin OS=Gulosibacter molinativorax OX=256821 GN=GMOLON4_08800 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84SKK15 pKa = 10.39KK16 pKa = 9.03HH17 pKa = 4.36GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILASRR35 pKa = 11.84RR36 pKa = 11.84SKK38 pKa = 10.36GRR40 pKa = 11.84KK41 pKa = 8.53VLSAA45 pKa = 4.05

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3115

0

3115

1006633

29

2245

323.2

34.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.119 ± 0.066

0.487 ± 0.01

6.023 ± 0.038

6.676 ± 0.046

3.278 ± 0.024

8.524 ± 0.04

2.032 ± 0.022

5.135 ± 0.033

2.578 ± 0.03

9.779 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.994 ± 0.018

2.524 ± 0.025

5.006 ± 0.029

3.249 ± 0.03

6.894 ± 0.05

5.904 ± 0.032

6.041 ± 0.033

8.219 ± 0.04

1.436 ± 0.016

2.103 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski