Acinetobacter sp. CIP 102637

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; unclassified Acinetobacter

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2615 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|N8XIL4|N8XIL4_9GAMM Uncharacterized protein OS=Acinetobacter sp. CIP 102637 OX=1144669 GN=F967_00589 PE=3 SV=1
MM1 pKa = 7.69SYY3 pKa = 10.62YY4 pKa = 10.57HH5 pKa = 7.6ILIEE9 pKa = 4.38VNDD12 pKa = 4.95HH13 pKa = 6.66ISTIEE18 pKa = 3.59QTRR21 pKa = 11.84DD22 pKa = 3.15VEE24 pKa = 4.37ILDD27 pKa = 3.81IQDD30 pKa = 3.23ISPYY34 pKa = 9.58LHH36 pKa = 7.12SILIPYY42 pKa = 9.93FNEE45 pKa = 3.84QEE47 pKa = 4.16IEE49 pKa = 4.23LEE51 pKa = 4.34DD52 pKa = 3.7EE53 pKa = 3.95NVAYY57 pKa = 10.31DD58 pKa = 4.39EE59 pKa = 4.32ILHH62 pKa = 6.67LEE64 pKa = 4.45VKK66 pKa = 8.86QTLLPIEE73 pKa = 4.24HH74 pKa = 7.25LIEE77 pKa = 4.48EE78 pKa = 4.45EE79 pKa = 4.15QKK81 pKa = 10.59QLPSDD86 pKa = 3.56TDD88 pKa = 3.61VTITAYY94 pKa = 10.19EE95 pKa = 3.98IFNDD99 pKa = 3.69RR100 pKa = 11.84DD101 pKa = 3.11LSQDD105 pKa = 3.04VTAVIFDD112 pKa = 3.38ILEE115 pKa = 4.1AVKK118 pKa = 10.82LDD120 pKa = 4.0DD121 pKa = 5.12APP123 pKa = 4.9

Molecular weight: 14.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|N8XDV9|N8XDV9_9GAMM FA_desaturase domain-containing protein OS=Acinetobacter sp. CIP 102637 OX=1144669 GN=F967_02350 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.55RR3 pKa = 11.84TFQPSEE9 pKa = 3.97LKK11 pKa = 10.13RR12 pKa = 11.84KK13 pKa = 8.98RR14 pKa = 11.84VHH16 pKa = 6.36GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4AGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.18GRR39 pKa = 11.84HH40 pKa = 5.1SLTVV44 pKa = 3.06

Molecular weight: 5.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2615

0

2615

782047

20

3312

299.1

33.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.676 ± 0.058

0.959 ± 0.018

5.27 ± 0.04

5.941 ± 0.049

4.163 ± 0.035

6.379 ± 0.051

2.433 ± 0.03

6.726 ± 0.041

5.646 ± 0.047

10.486 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.494 ± 0.025

4.358 ± 0.043

3.891 ± 0.03

5.803 ± 0.058

4.524 ± 0.036

5.893 ± 0.042

5.327 ± 0.049

6.604 ± 0.041

1.238 ± 0.017

3.19 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski