Fowl aviadenovirus E

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus

Average proteome isoelectric point is 7.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 46 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E9KLB4|E9KLB4_9ADEN ORF32 OS=Fowl aviadenovirus E OX=190065 PE=4 SV=1
MM1 pKa = 7.12ATSTPHH7 pKa = 6.67AFSFGQIGSRR17 pKa = 11.84KK18 pKa = 9.34RR19 pKa = 11.84PAGGDD24 pKa = 3.67GEE26 pKa = 4.79RR27 pKa = 11.84DD28 pKa = 3.22ASKK31 pKa = 10.42VPKK34 pKa = 8.97MQTPAPSATANGNDD48 pKa = 4.13EE49 pKa = 5.04LDD51 pKa = 3.4LVYY54 pKa = 10.27PFWLQNGSTGGGGGGGGSGGNPSLNPPFLDD84 pKa = 3.61PNGPLAVQNNLLKK97 pKa = 11.07VNTAAPITVANKK109 pKa = 10.35ALTLAYY115 pKa = 9.96EE116 pKa = 4.36PDD118 pKa = 3.78SLEE121 pKa = 4.31LTNQQQLAVKK131 pKa = 9.52IDD133 pKa = 3.54PEE135 pKa = 5.08GPLKK139 pKa = 10.43ATTEE143 pKa = 4.8GIQLSVDD150 pKa = 3.45PTTLEE155 pKa = 3.71VDD157 pKa = 3.65DD158 pKa = 5.05VDD160 pKa = 3.82WEE162 pKa = 4.5LTVKK166 pKa = 10.64LDD168 pKa = 3.77PDD170 pKa = 4.22GPLDD174 pKa = 3.87SSATGITVRR183 pKa = 11.84VDD185 pKa = 3.12EE186 pKa = 4.58TLLIEE191 pKa = 5.21DD192 pKa = 4.14VGSGQGKK199 pKa = 9.0EE200 pKa = 3.96LGVNLNPTGPITADD214 pKa = 3.45DD215 pKa = 3.66QGLDD219 pKa = 4.5LEE221 pKa = 5.33IDD223 pKa = 3.64NQTLKK228 pKa = 10.94VNSVTGGGVLAVQLKK243 pKa = 9.59SQGGLTAQTDD253 pKa = 5.39GIQVNTQNSITVTNGALDD271 pKa = 3.61VKK273 pKa = 10.68VAANGPLEE281 pKa = 4.23STDD284 pKa = 3.14TGLTLNYY291 pKa = 10.33DD292 pKa = 3.79PGDD295 pKa = 3.62FTVNAGTLSIIRR307 pKa = 11.84DD308 pKa = 3.59PALVANAYY316 pKa = 7.16LTSGASTLQQFTAKK330 pKa = 10.14SEE332 pKa = 4.06NSSQFSFPCAYY343 pKa = 10.45YY344 pKa = 9.99LQQWLSDD351 pKa = 3.64GLVLSSLYY359 pKa = 10.79LKK361 pKa = 10.5LDD363 pKa = 3.56RR364 pKa = 11.84AQFTNMPTGANYY376 pKa = 10.13QNARR380 pKa = 11.84YY381 pKa = 7.53FTFWVGAGTSFNLSTLTEE399 pKa = 4.02PTITPNTTQWNAFAPALDD417 pKa = 4.12YY418 pKa = 11.51SGAPPFIYY426 pKa = 10.17DD427 pKa = 3.38ASSVVTIYY435 pKa = 10.55FEE437 pKa = 4.19PTSGRR442 pKa = 11.84LEE444 pKa = 4.22SYY446 pKa = 10.98LPVLTDD452 pKa = 3.12NWSQTYY458 pKa = 10.61NPGTVTLCVKK468 pKa = 8.17TVRR471 pKa = 11.84VQLRR475 pKa = 11.84SQGTFSTLVCYY486 pKa = 10.21NFRR489 pKa = 11.84CQNTGIFNSNATAGTMTLGPIFFSCPALSTANAPP523 pKa = 3.63

Molecular weight: 55.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E9KLA4|E9KLA4_9ADEN Core protein pX OS=Fowl aviadenovirus E OX=190065 PE=4 SV=1
MM1 pKa = 7.68SILISPNDD9 pKa = 3.25NRR11 pKa = 11.84GWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSMRR24 pKa = 11.84GVGIRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84LTLRR36 pKa = 11.84TLLGLGTVSRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84GGRR52 pKa = 11.84SSRR55 pKa = 11.84RR56 pKa = 11.84SSRR59 pKa = 11.84PASTTTRR66 pKa = 11.84LMVVRR71 pKa = 11.84TSRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 3.32

Molecular weight: 9.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

45

1

46

12659

54

1226

275.2

30.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.018 ± 0.454

1.88 ± 0.233

5.419 ± 0.378

5.79 ± 0.436

4.139 ± 0.216

6.841 ± 0.398

2.401 ± 0.211

3.507 ± 0.15

3.247 ± 0.335

8.966 ± 0.341

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.409 ± 0.17

3.855 ± 0.4

6.896 ± 0.393

3.705 ± 0.233

8.042 ± 0.668

7.102 ± 0.55

6.019 ± 0.388

6.636 ± 0.345

1.382 ± 0.145

3.744 ± 0.311
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski