Fowl adenovirus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; unclassified Aviadenovirus

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 34 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5P8NQN0|A0A5P8NQN0_9ADEN 22k protein OS=Fowl adenovirus OX=1354736 PE=4 SV=1
MM1 pKa = 7.52AKK3 pKa = 8.76STPFTFSMGQHH14 pKa = 6.21SSRR17 pKa = 11.84KK18 pKa = 9.39RR19 pKa = 11.84PADD22 pKa = 3.44SEE24 pKa = 4.19NTQNASKK31 pKa = 10.45VAKK34 pKa = 8.38TQTSATRR41 pKa = 11.84AGVDD45 pKa = 3.89GNDD48 pKa = 4.54DD49 pKa = 4.1LNLVYY54 pKa = 9.94PFWLQNSTSGGGGGGSGGNPSLNPPFIDD82 pKa = 3.73PNGPLYY88 pKa = 10.31VQNSLLYY95 pKa = 10.35VKK97 pKa = 7.76TTAPIEE103 pKa = 4.16VEE105 pKa = 4.18NKK107 pKa = 10.27SLALAYY113 pKa = 10.4NSSLDD118 pKa = 3.5VDD120 pKa = 4.2AQNQLQVKK128 pKa = 9.2VDD130 pKa = 3.45AEE132 pKa = 4.46GPIRR136 pKa = 11.84ISPDD140 pKa = 3.08GLDD143 pKa = 3.18IAVDD147 pKa = 4.11PSTLEE152 pKa = 4.49VDD154 pKa = 4.89DD155 pKa = 4.35EE156 pKa = 4.52WEE158 pKa = 4.23LTVKK162 pKa = 10.5LDD164 pKa = 3.59PAGPISSSSAGINIRR179 pKa = 11.84VDD181 pKa = 3.33DD182 pKa = 4.2TLLIEE187 pKa = 6.18DD188 pKa = 5.61DD189 pKa = 4.27DD190 pKa = 4.23TTQVKK195 pKa = 9.92EE196 pKa = 4.4LGVHH200 pKa = 6.68LNPNGPITADD210 pKa = 3.16QDD212 pKa = 4.14GLDD215 pKa = 4.68LEE217 pKa = 5.14VDD219 pKa = 3.83PQTLTVTTSGATGGVLGVLLKK240 pKa = 10.67PSGGLQTSIQGIGVAVADD258 pKa = 4.18TLTISSNNTVEE269 pKa = 4.99VKK271 pKa = 9.88TDD273 pKa = 3.71PNGSIGSSSNGIAVVTDD290 pKa = 3.45PAGPLTTSSNGLSLKK305 pKa = 8.58LTPNGSIQSSSTGLSVQTDD324 pKa = 3.58PAGPITSGANGLSLSYY340 pKa = 9.5DD341 pKa = 3.29TSDD344 pKa = 3.48FTVSQGMLSIIRR356 pKa = 11.84NPSTYY361 pKa = 9.77PDD363 pKa = 3.91AYY365 pKa = 10.87LEE367 pKa = 4.61SGTNLLNNYY376 pKa = 7.05TAYY379 pKa = 10.66AEE381 pKa = 4.05NSSNYY386 pKa = 9.63KK387 pKa = 9.97FNCAYY392 pKa = 10.3FLQSWYY398 pKa = 11.27SNGLVTSSLYY408 pKa = 11.07LKK410 pKa = 10.39INRR413 pKa = 11.84DD414 pKa = 3.68NLTSLPSGQLSEE426 pKa = 3.98NAKK429 pKa = 10.55YY430 pKa = 8.24FTFWVPTYY438 pKa = 11.17EE439 pKa = 5.04SMNLSNVATPTITPSSVPWGAFLPAQNCTSNPAFKK474 pKa = 10.69YY475 pKa = 10.75YY476 pKa = 9.51LTQPPSIYY484 pKa = 10.32FEE486 pKa = 4.53PEE488 pKa = 3.66SGSVQTFQPVLTGDD502 pKa = 3.49WDD504 pKa = 4.24TNTYY508 pKa = 10.85NPGTVQVCILPQTVVGGQSTFVNMTCYY535 pKa = 10.52NFRR538 pKa = 11.84CQNPGIFKK546 pKa = 10.24VAASSGTFTIGPIFYY561 pKa = 10.31SCPTNKK567 pKa = 8.58LTQPP571 pKa = 3.58

Molecular weight: 60.33 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5P8NQL4|A0A5P8NQL4_9ADEN PTP protein OS=Fowl adenovirus OX=1354736 PE=4 SV=1
MM1 pKa = 7.68SILISPNDD9 pKa = 3.25NRR11 pKa = 11.84GWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSMRR24 pKa = 11.84GVGIRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84LTLRR36 pKa = 11.84TLLGLGTSSRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84SGGRR52 pKa = 11.84SSRR55 pKa = 11.84RR56 pKa = 11.84RR57 pKa = 11.84SRR59 pKa = 11.84PASTTTRR66 pKa = 11.84VMLVRR71 pKa = 11.84TSRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 3.32

Molecular weight: 9.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

33

1

34

11899

76

1305

350.0

39.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.841 ± 0.442

1.79 ± 0.26

5.572 ± 0.249

5.95 ± 0.52

4.152 ± 0.269

6.429 ± 0.316

2.378 ± 0.278

3.958 ± 0.174

3.706 ± 0.314

8.673 ± 0.334

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.395 ± 0.187

4.379 ± 0.487

6.454 ± 0.246

3.664 ± 0.239

7.37 ± 0.54

7.127 ± 0.424

6.043 ± 0.383

6.656 ± 0.277

1.361 ± 0.109

4.101 ± 0.285
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski