Odonata-associated circular virus-17

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UI13|A0A0B4UI13_9VIRU Replication-associated protein OS=Odonata-associated circular virus-17 OX=1592117 PE=4 SV=1
MM1 pKa = 7.11TSEE4 pKa = 4.34VMTSIAPGNTKK15 pKa = 9.8PVALKK20 pKa = 10.36ARR22 pKa = 11.84AYY24 pKa = 10.51QFTLNQPDD32 pKa = 4.27VYY34 pKa = 11.33DD35 pKa = 3.54KK36 pKa = 11.34LKK38 pKa = 11.21NILTGLKK45 pKa = 9.66TMDD48 pKa = 3.55YY49 pKa = 10.4LISCRR54 pKa = 11.84EE55 pKa = 3.93TAPSTGHH62 pKa = 4.66VHH64 pKa = 4.23MHH66 pKa = 5.87VYY68 pKa = 10.84AHH70 pKa = 7.03FSQQYY75 pKa = 9.48RR76 pKa = 11.84LPKK79 pKa = 9.93KK80 pKa = 10.29IRR82 pKa = 11.84DD83 pKa = 3.86LGCHH87 pKa = 6.22IEE89 pKa = 4.0ICLVGAKK96 pKa = 9.75QNIAYY101 pKa = 8.87IRR103 pKa = 11.84KK104 pKa = 9.17GGDD107 pKa = 3.1IIDD110 pKa = 4.77EE111 pKa = 4.6IGDD114 pKa = 3.83EE115 pKa = 4.07PHH117 pKa = 6.09QGARR121 pKa = 11.84TVGEE125 pKa = 4.31LMEE128 pKa = 6.42ADD130 pKa = 3.53IKK132 pKa = 11.43SIDD135 pKa = 3.32PHH137 pKa = 7.82LYY139 pKa = 10.06RR140 pKa = 11.84IKK142 pKa = 10.63KK143 pKa = 10.07QIDD146 pKa = 3.59AEE148 pKa = 4.21QHH150 pKa = 6.37DD151 pKa = 5.7LDD153 pKa = 4.59TFMSMLDD160 pKa = 3.77EE161 pKa = 5.75IEE163 pKa = 5.36ADD165 pKa = 3.72DD166 pKa = 4.86LKK168 pKa = 11.22APTVIYY174 pKa = 9.35ITGGTGKK181 pKa = 10.52GKK183 pKa = 9.0TYY185 pKa = 10.53SAYY188 pKa = 9.67KK189 pKa = 10.01RR190 pKa = 11.84ALKK193 pKa = 9.92EE194 pKa = 3.89YY195 pKa = 8.86PKK197 pKa = 10.86KK198 pKa = 10.86KK199 pKa = 9.65IGKK202 pKa = 8.31LTLKK206 pKa = 10.49NDD208 pKa = 4.65FIDD211 pKa = 4.76IVNGDD216 pKa = 3.48NAEE219 pKa = 4.15CFVIEE224 pKa = 4.5EE225 pKa = 4.39FRR227 pKa = 11.84PSQIKK232 pKa = 10.58ASDD235 pKa = 3.47FLQLTDD241 pKa = 3.67KK242 pKa = 11.17YY243 pKa = 11.22GYY245 pKa = 9.65RR246 pKa = 11.84CNIKK250 pKa = 10.62GGFATLRR257 pKa = 11.84PKK259 pKa = 10.17MIIICSIIQPEE270 pKa = 4.47HH271 pKa = 6.28IYY273 pKa = 10.7KK274 pKa = 10.81EE275 pKa = 4.23EE276 pKa = 4.02VNKK279 pKa = 10.37QFLRR283 pKa = 11.84RR284 pKa = 11.84ITEE287 pKa = 4.47RR288 pKa = 11.84IDD290 pKa = 3.48LGPEE294 pKa = 4.16LDD296 pKa = 4.75PVDD299 pKa = 4.38EE300 pKa = 5.0LYY302 pKa = 10.78EE303 pKa = 4.02

Molecular weight: 34.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UI13|A0A0B4UI13_9VIRU Replication-associated protein OS=Odonata-associated circular virus-17 OX=1592117 PE=4 SV=1
MM1 pKa = 7.48VIFLEE6 pKa = 4.67PSFSLVKK13 pKa = 10.36MSQTQIVDD21 pKa = 3.4YY22 pKa = 10.94VFYY25 pKa = 10.23SCYY28 pKa = 8.42MAYY31 pKa = 10.26GRR33 pKa = 11.84RR34 pKa = 11.84STYY37 pKa = 9.23RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 10.06GRR42 pKa = 11.84RR43 pKa = 11.84GNRR46 pKa = 11.84SLTTRR51 pKa = 11.84RR52 pKa = 11.84IFNNKK57 pKa = 7.4GAKK60 pKa = 9.28AQAKK64 pKa = 9.37QIYY67 pKa = 8.6ALKK70 pKa = 10.14RR71 pKa = 11.84AVNRR75 pKa = 11.84VRR77 pKa = 11.84AQCKK81 pKa = 10.13PEE83 pKa = 3.77VKK85 pKa = 9.92YY86 pKa = 11.23VKK88 pKa = 10.54SEE90 pKa = 4.0TQNRR94 pKa = 11.84ALGLEE99 pKa = 4.1HH100 pKa = 6.68QGASFLQYY108 pKa = 10.21YY109 pKa = 9.22AQLPMPGISAGTGDD123 pKa = 4.22GNRR126 pKa = 11.84IGDD129 pKa = 4.03NVRR132 pKa = 11.84LLPMKK137 pKa = 10.5LGINIRR143 pKa = 11.84YY144 pKa = 8.25EE145 pKa = 4.0EE146 pKa = 4.27YY147 pKa = 10.23MNSLTKK153 pKa = 10.09TYY155 pKa = 10.39PVDD158 pKa = 3.22IPLNSTGGQVRR169 pKa = 11.84IIAVQAITAHH179 pKa = 5.97SNEE182 pKa = 4.15PQLVDD187 pKa = 3.94LMNANEE193 pKa = 4.09YY194 pKa = 11.43NMGAIGAAGMMNMSFKK210 pKa = 10.73RR211 pKa = 11.84GITSHH216 pKa = 6.4YY217 pKa = 9.17KK218 pKa = 9.22ILMNKK223 pKa = 8.42VVTVSKK229 pKa = 10.61DD230 pKa = 3.21RR231 pKa = 11.84PIVNKK236 pKa = 10.23RR237 pKa = 11.84YY238 pKa = 9.95LIRR241 pKa = 11.84PAIKK245 pKa = 9.16HH246 pKa = 5.6LKK248 pKa = 8.42VGRR251 pKa = 11.84RR252 pKa = 11.84TDD254 pKa = 3.27STT256 pKa = 3.82

Molecular weight: 28.97 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

559

256

303

279.5

31.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.619 ± 0.533

1.431 ± 0.431

5.367 ± 1.748

5.188 ± 1.37

2.683 ± 0.225

6.977 ± 0.296

2.326 ± 0.507

8.945 ± 1.27

8.229 ± 0.795

7.513 ± 0.32

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.578 ± 0.737

4.651 ± 1.321

4.293 ± 0.257

4.293 ± 0.262

6.619 ± 1.571

4.83 ± 0.943

5.725 ± 0.17

5.367 ± 1.105

0.0 ± 0.0

5.367 ± 0.327
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski