Anaerotruncus colihominis DSM 17241

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Oscillospiraceae; Anaerotruncus; Anaerotruncus colihominis

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4421 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B0PC25|B0PC25_9FIRM NLPA lipoprotein OS=Anaerotruncus colihominis DSM 17241 OX=445972 GN=ANACOL_02334 PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 10.34KK3 pKa = 9.75ILALTLALCMLFTSMVGCSSGSDD26 pKa = 3.09TTAAGTGSNTSTEE39 pKa = 4.2AGTTQPDD46 pKa = 3.37TGDD49 pKa = 3.58AEE51 pKa = 4.52ASEE54 pKa = 4.96EE55 pKa = 4.03PTEE58 pKa = 4.3TNDD61 pKa = 5.4DD62 pKa = 3.74PTADD66 pKa = 3.77LQVSEE71 pKa = 5.06DD72 pKa = 3.44APTYY76 pKa = 10.91VMVSKK81 pKa = 9.46TLSDD85 pKa = 3.51PVFIDD90 pKa = 3.14MYY92 pKa = 9.96IGFRR96 pKa = 11.84EE97 pKa = 4.15FCEE100 pKa = 4.53SIGANCMYY108 pKa = 10.11RR109 pKa = 11.84GSDD112 pKa = 3.13EE113 pKa = 3.91PTAEE117 pKa = 4.26KK118 pKa = 10.13EE119 pKa = 4.01IEE121 pKa = 4.57IITQLMAQGVDD132 pKa = 3.35GLAVIAADD140 pKa = 4.51FDD142 pKa = 3.94ALEE145 pKa = 4.38PVLTQAMGQGIAVVTFDD162 pKa = 4.3SAANPDD168 pKa = 3.35SRR170 pKa = 11.84QLHH173 pKa = 5.48VEE175 pKa = 3.81QASIDD180 pKa = 3.87LVGRR184 pKa = 11.84DD185 pKa = 3.59QMKK188 pKa = 10.32SALEE192 pKa = 4.13IIGGPGAEE200 pKa = 3.96GTVGILSAQPEE211 pKa = 4.68SQLHH215 pKa = 6.44ADD217 pKa = 3.47WCNAMLKK224 pKa = 10.0EE225 pKa = 4.53VEE227 pKa = 4.79DD228 pKa = 4.04NPEE231 pKa = 3.79DD232 pKa = 3.8FANVTVLPIAYY243 pKa = 10.05GDD245 pKa = 4.17DD246 pKa = 4.29LPDD249 pKa = 3.88KK250 pKa = 10.4STTEE254 pKa = 3.92AQAMLQNYY262 pKa = 8.99PDD264 pKa = 3.76IDD266 pKa = 4.32VIISPTTVGILSAAKK281 pKa = 9.83VIQDD285 pKa = 3.67MGSEE289 pKa = 4.24CKK291 pKa = 9.13VTGVGLPSEE300 pKa = 4.16MAPYY304 pKa = 9.72IEE306 pKa = 5.9SGICYY311 pKa = 10.06DD312 pKa = 3.82CYY314 pKa = 11.06LWNPYY319 pKa = 9.58DD320 pKa = 3.58QGYY323 pKa = 8.72LAAASVNSISTGEE336 pKa = 4.09STGAVGDD343 pKa = 3.94TVTAGRR349 pKa = 11.84LGEE352 pKa = 4.22YY353 pKa = 9.03TVEE356 pKa = 4.1EE357 pKa = 5.03YY358 pKa = 11.3YY359 pKa = 11.04DD360 pKa = 3.91GGTQVLLGDD369 pKa = 4.81PIRR372 pKa = 11.84FTKK375 pKa = 10.33EE376 pKa = 3.45NIGEE380 pKa = 4.18YY381 pKa = 10.36KK382 pKa = 10.75DD383 pKa = 4.21LFF385 pKa = 4.8

Molecular weight: 40.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B0P7H2|B0P7H2_9FIRM Uncharacterized protein OS=Anaerotruncus colihominis DSM 17241 OX=445972 GN=ANACOL_00703 PE=4 SV=1
MM1 pKa = 7.5KK2 pKa = 10.12KK3 pKa = 9.97FHH5 pKa = 5.45VTRR8 pKa = 11.84KK9 pKa = 7.37TVLTIVGVTLPLTAAAILLPRR30 pKa = 11.84LKK32 pKa = 10.11RR33 pKa = 11.84SRR35 pKa = 11.84RR36 pKa = 11.84ARR38 pKa = 11.84SVRR41 pKa = 11.84AA42 pKa = 3.42

Molecular weight: 4.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4421

0

4421

1126561

39

2434

254.8

28.14

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.958 ± 0.061

1.725 ± 0.02

5.623 ± 0.039

6.35 ± 0.04

4.03 ± 0.026

7.799 ± 0.041

1.772 ± 0.018

6.24 ± 0.043

4.781 ± 0.035

9.487 ± 0.043

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.929 ± 0.02

3.402 ± 0.025

4.23 ± 0.031

3.545 ± 0.024

5.958 ± 0.043

5.674 ± 0.036

5.224 ± 0.029

6.895 ± 0.037

0.969 ± 0.015

3.408 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski