Beihai sobemo-like virus 6

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KEB9|A0A1L3KEB9_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 6 OX=1922703 PE=4 SV=1
MM1 pKa = 7.88AICDD5 pKa = 4.14SVSACAFTAFIWGPFAAVTFFLGLLFKK32 pKa = 10.61IAGSFVSFLDD42 pKa = 4.8AITEE46 pKa = 4.43GPLKK50 pKa = 10.8VYY52 pKa = 10.41AALLLAVVTSGGAAYY67 pKa = 10.12LYY69 pKa = 9.87YY70 pKa = 10.79RR71 pKa = 11.84MRR73 pKa = 11.84ILSRR77 pKa = 11.84VVLLDD82 pKa = 3.4VAEE85 pKa = 4.61EE86 pKa = 3.99PVGPYY91 pKa = 9.67RR92 pKa = 11.84GSFGRR97 pKa = 11.84LFFRR101 pKa = 11.84QSPGDD106 pKa = 3.63KK107 pKa = 10.4VFEE110 pKa = 4.31AVPEE114 pKa = 3.97AMVMSSSGEE123 pKa = 3.9LGTAQVTYY131 pKa = 10.84KK132 pKa = 10.42LQPLGGDD139 pKa = 3.55GDD141 pKa = 4.44EE142 pKa = 4.37STLAYY147 pKa = 10.38SSPPRR152 pKa = 11.84VALKK156 pKa = 10.42LPPFMFEE163 pKa = 3.68IGLMTGDD170 pKa = 3.64GMMTILGIGFRR181 pKa = 11.84AGDD184 pKa = 3.64YY185 pKa = 10.78LVTARR190 pKa = 11.84HH191 pKa = 6.19LFHH194 pKa = 7.01SRR196 pKa = 11.84NKK198 pKa = 9.5VGFGARR204 pKa = 11.84SCFIRR209 pKa = 11.84RR210 pKa = 11.84GPISVEE216 pKa = 3.94VQLTNPIFTNGKK228 pKa = 8.31SNEE231 pKa = 4.02FEE233 pKa = 4.3SMSWMDD239 pKa = 3.02ICAYY243 pKa = 9.89LVPPGEE249 pKa = 4.04WAALGARR256 pKa = 11.84SLRR259 pKa = 11.84TTEE262 pKa = 4.52LSSEE266 pKa = 4.08GDD268 pKa = 3.59GTVEE272 pKa = 4.01VYY274 pKa = 10.52GRR276 pKa = 11.84PGAQLMVSSGQLVNDD291 pKa = 3.19VKK293 pKa = 10.84MEE295 pKa = 3.93VEE297 pKa = 4.21RR298 pKa = 11.84GVLSHH303 pKa = 6.65TASTVGTFSGSPLVMMQGGAYY324 pKa = 9.27KK325 pKa = 10.48LVGMHH330 pKa = 6.58IAGGVDD336 pKa = 3.09VNYY339 pKa = 10.35AVSAGGVRR347 pKa = 11.84RR348 pKa = 11.84MLKK351 pKa = 10.52ALDD354 pKa = 3.59FGPRR358 pKa = 11.84SRR360 pKa = 11.84AGVVWDD366 pKa = 3.7ALRR369 pKa = 11.84PQFHH373 pKa = 6.69NEE375 pKa = 3.7SKK377 pKa = 10.59EE378 pKa = 3.89EE379 pKa = 3.85RR380 pKa = 11.84RR381 pKa = 11.84KK382 pKa = 10.42QMEE385 pKa = 4.34PKK387 pKa = 10.09YY388 pKa = 10.25SLWDD392 pKa = 3.64EE393 pKa = 4.25EE394 pKa = 4.16EE395 pKa = 3.62MRR397 pKa = 11.84ARR399 pKa = 11.84QDD401 pKa = 3.32QEE403 pKa = 3.89DD404 pKa = 4.23CEE406 pKa = 4.7RR407 pKa = 11.84EE408 pKa = 3.93LMAEE412 pKa = 4.15VKK414 pKa = 10.13DD415 pKa = 3.51YY416 pKa = 11.17HH417 pKa = 6.22AAKK420 pKa = 10.5LHH422 pKa = 5.5GQGHH426 pKa = 7.27LDD428 pKa = 3.1WKK430 pKa = 10.12IGKK433 pKa = 8.59RR434 pKa = 11.84QQRR437 pKa = 11.84TEE439 pKa = 4.09KK440 pKa = 10.2KK441 pKa = 10.16DD442 pKa = 3.18AAASSKK448 pKa = 10.07EE449 pKa = 3.6RR450 pKa = 11.84WADD453 pKa = 3.33MMDD456 pKa = 3.73DD457 pKa = 4.49SIEE460 pKa = 4.08EE461 pKa = 4.32SPSRR465 pKa = 11.84TFTDD469 pKa = 3.42EE470 pKa = 3.9EE471 pKa = 4.6LEE473 pKa = 4.13LAEE476 pKa = 4.43RR477 pKa = 11.84LYY479 pKa = 11.27EE480 pKa = 4.32RR481 pKa = 11.84LSQMKK486 pKa = 9.84RR487 pKa = 11.84EE488 pKa = 4.1KK489 pKa = 11.04AKK491 pKa = 10.52GVYY494 pKa = 9.82NGWIDD499 pKa = 3.26KK500 pKa = 10.84SYY502 pKa = 9.35VQGYY506 pKa = 9.45CFLSKK511 pKa = 9.89TKK513 pKa = 9.46TYY515 pKa = 10.52KK516 pKa = 10.9ALFVLSRR523 pKa = 11.84INRR526 pKa = 11.84IQLWSWKK533 pKa = 8.98DD534 pKa = 3.51RR535 pKa = 11.84SWIAMEE541 pKa = 4.51EE542 pKa = 4.23LLSHH546 pKa = 6.61LPSVQEE552 pKa = 3.83EE553 pKa = 4.37DD554 pKa = 3.06QGQEE558 pKa = 3.8DD559 pKa = 4.03RR560 pKa = 11.84EE561 pKa = 4.31EE562 pKa = 4.11EE563 pKa = 4.38TEE565 pKa = 4.1GAEE568 pKa = 4.04QQEE571 pKa = 4.46ADD573 pKa = 4.06AQEE576 pKa = 4.26QPPSDD581 pKa = 4.11SAQHH585 pKa = 5.96EE586 pKa = 4.78SPPGLKK592 pKa = 10.16RR593 pKa = 11.84SDD595 pKa = 4.05SIAAAVWHH603 pKa = 6.28NSAPLRR609 pKa = 11.84YY610 pKa = 8.98EE611 pKa = 3.77EE612 pKa = 5.09HH613 pKa = 6.72SLSKK617 pKa = 10.56PGLIGNLGAPRR628 pKa = 11.84AAPRR632 pKa = 11.84SDD634 pKa = 3.92HH635 pKa = 6.93PPHH638 pKa = 6.74SFPFATGGEE647 pKa = 4.37KK648 pKa = 10.17FWADD652 pKa = 3.04RR653 pKa = 11.84RR654 pKa = 11.84SQCRR658 pKa = 11.84RR659 pKa = 11.84PLEE662 pKa = 4.19PRR664 pKa = 11.84DD665 pKa = 3.96LNPQIEE671 pKa = 4.66GDD673 pKa = 3.7MEE675 pKa = 4.36DD676 pKa = 3.82WMTKK680 pKa = 10.39GDD682 pKa = 3.58WNSWRR687 pKa = 11.84RR688 pKa = 11.84LKK690 pKa = 11.04NVGAKK695 pKa = 8.91TLLQMPQMQEE705 pKa = 3.38YY706 pKa = 8.47RR707 pKa = 11.84QIMRR711 pKa = 11.84AGNVRR716 pKa = 11.84IWKK719 pKa = 9.61DD720 pKa = 2.9KK721 pKa = 9.3KK722 pKa = 8.73TRR724 pKa = 11.84SSNVAYY730 pKa = 10.12NANGAAHH737 pKa = 8.23AYY739 pKa = 10.36RR740 pKa = 11.84IGTCEE745 pKa = 3.8ASRR748 pKa = 11.84GRR750 pKa = 11.84PRR752 pKa = 11.84EE753 pKa = 4.11AKK755 pKa = 9.76HH756 pKa = 5.75VSEE759 pKa = 5.35DD760 pKa = 4.31FVDD763 pKa = 3.87ALQDD767 pKa = 2.98LWYY770 pKa = 10.24EE771 pKa = 4.18GFEE774 pKa = 4.46EE775 pKa = 4.86PGSLAKK781 pKa = 10.26KK782 pKa = 8.93VSGYY786 pKa = 10.88ALPPSGPDD794 pKa = 2.96AVKK797 pKa = 10.67ASFIGQCGRR806 pKa = 11.84QKK808 pKa = 10.5PGNWDD813 pKa = 3.43KK814 pKa = 11.34LRR816 pKa = 11.84EE817 pKa = 4.18TPNFHH822 pKa = 5.52TQVNRR827 pKa = 11.84FYY829 pKa = 11.26KK830 pKa = 10.28EE831 pKa = 3.86YY832 pKa = 10.2TPSDD836 pKa = 3.49PCTRR840 pKa = 11.84SSIQDD845 pKa = 3.85SIDD848 pKa = 3.61HH849 pKa = 6.38YY850 pKa = 10.92LDD852 pKa = 3.62NMDD855 pKa = 3.95GAKK858 pKa = 10.01SAGWSSRR865 pKa = 11.84VRR867 pKa = 11.84AGTKK871 pKa = 9.82GVWSRR876 pKa = 11.84NEE878 pKa = 3.71DD879 pKa = 3.29ARR881 pKa = 11.84CVLTYY886 pKa = 10.93CVMARR891 pKa = 11.84LALRR895 pKa = 11.84IAEE898 pKa = 4.32GDD900 pKa = 3.61NIHH903 pKa = 6.41WLKK906 pKa = 11.19AEE908 pKa = 4.27DD909 pKa = 4.0MVSLGLKK916 pKa = 10.43DD917 pKa = 3.4PVEE920 pKa = 4.33IFTKK924 pKa = 10.55TEE926 pKa = 3.39AHH928 pKa = 6.84DD929 pKa = 3.77EE930 pKa = 4.31KK931 pKa = 10.92KK932 pKa = 11.14VKK934 pKa = 10.3DD935 pKa = 3.85EE936 pKa = 3.74RR937 pKa = 11.84WRR939 pKa = 11.84LIWVVSMIDD948 pKa = 4.16SVCQDD953 pKa = 2.67IAHH956 pKa = 6.94RR957 pKa = 11.84HH958 pKa = 4.22QNKK961 pKa = 8.44TDD963 pKa = 3.02IYY965 pKa = 10.13AYY967 pKa = 10.4AAGKK971 pKa = 9.76LNCQAVGLGHH981 pKa = 7.2HH982 pKa = 7.25DD983 pKa = 3.57NGVKK987 pKa = 10.45RR988 pKa = 11.84IGEE991 pKa = 4.09MLEE994 pKa = 4.43EE995 pKa = 4.15ISKK998 pKa = 10.54KK999 pKa = 8.39YY1000 pKa = 9.31PRR1002 pKa = 11.84WGTAGQVAYY1011 pKa = 10.57DD1012 pKa = 4.48DD1013 pKa = 4.65FQSSDD1018 pKa = 2.94ASGWDD1023 pKa = 3.37LSVSRR1028 pKa = 11.84DD1029 pKa = 3.52AIYY1032 pKa = 10.63FDD1034 pKa = 3.47AEE1036 pKa = 3.75RR1037 pKa = 11.84RR1038 pKa = 11.84IALSTRR1044 pKa = 11.84ACPAYY1049 pKa = 10.68NDD1051 pKa = 4.4LLWAEE1056 pKa = 4.35AACNSAHH1063 pKa = 5.7VVVIGTAMWTFEE1075 pKa = 4.14WFGITASGIPSTSAQNSSIRR1095 pKa = 11.84SFTAQACGATKK1106 pKa = 8.71QTAAGDD1112 pKa = 4.19DD1113 pKa = 3.98LVHH1116 pKa = 6.5TGSLDD1121 pKa = 3.4IEE1123 pKa = 4.47LLASTGCLTKK1133 pKa = 10.53EE1134 pKa = 3.75GSEE1137 pKa = 3.94RR1138 pKa = 11.84SSGPEE1143 pKa = 3.77GPVEE1147 pKa = 4.17FTSHH1151 pKa = 5.02VFKK1154 pKa = 10.99KK1155 pKa = 10.77VDD1157 pKa = 3.97GVWTATFNNLVKK1169 pKa = 10.17MLAHH1173 pKa = 6.9LDD1175 pKa = 3.37LRR1177 pKa = 11.84RR1178 pKa = 11.84PDD1180 pKa = 3.81GEE1182 pKa = 4.42APSSDD1187 pKa = 3.53MVSGMRR1193 pKa = 11.84FALRR1197 pKa = 11.84HH1198 pKa = 5.44TPLADD1203 pKa = 3.19RR1204 pKa = 11.84VFCQVCDD1211 pKa = 3.47RR1212 pKa = 11.84MGWSVSQPVDD1222 pKa = 3.72VAWEE1226 pKa = 3.84

Molecular weight:
136.56 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KEB9|A0A1L3KEB9_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 6 OX=1922703 PE=4 SV=1
MM1 pKa = 7.13RR2 pKa = 11.84TGRR5 pKa = 11.84RR6 pKa = 11.84QLRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AALPRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84ARR23 pKa = 11.84AATALRR29 pKa = 11.84PTNRR33 pKa = 11.84THH35 pKa = 6.1ATNVLATGVGAAPKK49 pKa = 10.01RR50 pKa = 11.84AFGCTTGHH58 pKa = 7.1TLACWDD64 pKa = 4.01AKK66 pKa = 10.63HH67 pKa = 6.08PHH69 pKa = 6.69HH70 pKa = 7.02LPLPRR75 pKa = 11.84AVGPYY80 pKa = 8.84TVIRR84 pKa = 11.84ATKK87 pKa = 8.43RR88 pKa = 11.84VQVSTVANLIGTYY101 pKa = 9.5QRR103 pKa = 11.84VAVTSPHH110 pKa = 4.99QGAWSEE116 pKa = 4.35VIMVSDD122 pKa = 3.95VNNLGLINSTNNAHH136 pKa = 6.61SISVDD141 pKa = 3.4LDD143 pKa = 3.5GMGDD147 pKa = 3.51SATLVPSALSVQIMCPTALQTASGIIYY174 pKa = 9.82AGVMNTQAQLGGRR187 pKa = 11.84SEE189 pKa = 4.24TWDD192 pKa = 3.04SYY194 pKa = 9.96MNKK197 pKa = 9.1FVQFQSPRR205 pKa = 11.84LLAASKK211 pKa = 10.22LALRR215 pKa = 11.84GTQINSYY222 pKa = 8.56PLNMAEE228 pKa = 3.96VSKK231 pKa = 10.89FSSLDD236 pKa = 3.11RR237 pKa = 11.84AGDD240 pKa = 3.76VDD242 pKa = 4.56FTWSNDD248 pKa = 3.07KK249 pKa = 11.35YY250 pKa = 11.05EE251 pKa = 4.38STGWAPIVIYY261 pKa = 10.43NPQGATLEE269 pKa = 4.01LLITVEE275 pKa = 3.69YY276 pKa = 10.11RR277 pKa = 11.84VRR279 pKa = 11.84FDD281 pKa = 4.28LDD283 pKa = 3.4HH284 pKa = 7.03PASASHH290 pKa = 6.07KK291 pKa = 8.3HH292 pKa = 5.85HH293 pKa = 7.45PIASDD298 pKa = 3.7GMWDD302 pKa = 3.26KK303 pKa = 10.5MVRR306 pKa = 11.84QASSLGHH313 pKa = 5.61GVMDD317 pKa = 4.11IADD320 pKa = 3.69VVANAGMAVGRR331 pKa = 11.84AMTVGNKK338 pKa = 10.02LMGAGRR344 pKa = 11.84SMLALAAA351 pKa = 4.51

Molecular weight:
37.95 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1577

351

1226

788.5

87.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.146 ± 1.317

1.458 ± 0.297

5.77 ± 0.597

5.834 ± 2.03

3.234 ± 0.75

8.053 ± 0.178

2.6 ± 0.403

3.678 ± 0.153

4.566 ± 0.845

7.673 ± 0.29

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.297 ± 0.34

3.044 ± 0.746

4.566 ± 0.004

3.741 ± 0.018

7.166 ± 0.54

8.18 ± 0.24

5.073 ± 1.149

6.785 ± 0.587

2.41 ± 0.345

2.727 ± 0.22

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski