Oceanobacillus bengalensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3792 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A494YR42|A0A494YR42_9BACI Uncharacterized protein OS=Oceanobacillus bengalensis OX=1435466 GN=D8M05_19845 PE=4 SV=1
MM1 pKa = 7.57KK2 pKa = 10.32KK3 pKa = 10.06LLAFISILFVCFLAACGGNNDD24 pKa = 4.02AEE26 pKa = 4.41NGEE29 pKa = 4.2EE30 pKa = 3.9ASTIKK35 pKa = 10.69VGASSVPHH43 pKa = 7.4AEE45 pKa = 3.98ILEE48 pKa = 4.26EE49 pKa = 4.18AVPLLEE55 pKa = 5.68DD56 pKa = 3.35EE57 pKa = 5.68GITLEE62 pKa = 3.94IEE64 pKa = 4.2PYY66 pKa = 10.24EE67 pKa = 5.23DD68 pKa = 3.47YY69 pKa = 11.39VLPNDD74 pKa = 4.67DD75 pKa = 4.86LASGDD80 pKa = 3.52LDD82 pKa = 4.64ANFFQHH88 pKa = 6.8VPFLNQTIADD98 pKa = 3.64TGYY101 pKa = 8.93EE102 pKa = 3.87IEE104 pKa = 4.92SIGEE108 pKa = 3.63IHH110 pKa = 6.82IEE112 pKa = 3.82PMGVYY117 pKa = 9.31SQNIKK122 pKa = 10.46SVEE125 pKa = 4.12EE126 pKa = 3.79IAEE129 pKa = 4.15GTEE132 pKa = 4.34VILSNSIAEE141 pKa = 4.25HH142 pKa = 5.78GRR144 pKa = 11.84ILSLFEE150 pKa = 3.91QQGLLTLDD158 pKa = 3.52EE159 pKa = 4.56SVEE162 pKa = 4.07KK163 pKa = 10.76SAATIDD169 pKa = 5.15DD170 pKa = 3.35IVEE173 pKa = 4.07NPKK176 pKa = 10.62NLTFSHH182 pKa = 7.16DD183 pKa = 3.7FAPEE187 pKa = 3.91FLPEE191 pKa = 4.7LYY193 pKa = 10.31HH194 pKa = 8.31SEE196 pKa = 4.06EE197 pKa = 4.02EE198 pKa = 4.05ALVVINTNYY207 pKa = 10.86AIGAEE212 pKa = 4.22LNPLEE217 pKa = 4.25DD218 pKa = 4.82AIFIEE223 pKa = 4.78EE224 pKa = 4.48EE225 pKa = 3.48EE226 pKa = 4.24SEE228 pKa = 4.94YY229 pKa = 11.32YY230 pKa = 10.58NVIAVQSEE238 pKa = 4.28DD239 pKa = 3.57VNNEE243 pKa = 3.81ALHH246 pKa = 6.26KK247 pKa = 10.17LVEE250 pKa = 4.19VLISEE255 pKa = 5.41DD256 pKa = 3.08IQNFILEE263 pKa = 4.39NYY265 pKa = 8.3EE266 pKa = 3.84GAVIPVGGNSS276 pKa = 3.05

Molecular weight: 30.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A494YZ20|A0A494YZ20_9BACI OsmC family peroxiredoxin OS=Oceanobacillus bengalensis OX=1435466 GN=D8M05_10545 PE=3 SV=1
MM1 pKa = 7.44KK2 pKa = 9.6RR3 pKa = 11.84TFQPNNRR10 pKa = 11.84KK11 pKa = 9.23RR12 pKa = 11.84KK13 pKa = 8.12KK14 pKa = 8.46VHH16 pKa = 5.5GFRR19 pKa = 11.84TRR21 pKa = 11.84MSTKK25 pKa = 10.06NGRR28 pKa = 11.84KK29 pKa = 8.75VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84KK36 pKa = 9.2KK37 pKa = 10.05GRR39 pKa = 11.84KK40 pKa = 8.66VLSAA44 pKa = 4.05

Molecular weight: 5.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3792

0

3792

1104151

14

1770

291.2

32.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.662 ± 0.04

0.634 ± 0.012

5.316 ± 0.029

7.81 ± 0.051

4.534 ± 0.035

6.72 ± 0.033

2.032 ± 0.022

8.49 ± 0.044

6.823 ± 0.04

9.539 ± 0.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.798 ± 0.019

4.86 ± 0.033

3.414 ± 0.024

3.492 ± 0.024

3.866 ± 0.03

5.953 ± 0.03

5.516 ± 0.027

6.964 ± 0.03

0.978 ± 0.014

3.598 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski