Habropoda laboriosa

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apinae; Anthopho

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12781 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0L7RCG6|A0A0L7RCG6_9HYME Transmembrane protease serine 6 OS=Habropoda laboriosa OX=597456 GN=WH47_10671 PE=3 SV=1
MM1 pKa = 7.43SCDD4 pKa = 5.86LLPEE8 pKa = 4.07WLNLFLDD15 pKa = 4.29DD16 pKa = 6.24VEE18 pKa = 4.78TTLCLPILLIMVHH31 pKa = 5.84CTVQFIINHH40 pKa = 5.75AMDD43 pKa = 3.92IGLTFYY49 pKa = 9.97QTVIQKK55 pKa = 10.11SDD57 pKa = 3.34EE58 pKa = 4.22EE59 pKa = 3.98EE60 pKa = 4.93AEE62 pKa = 4.33EE63 pKa = 5.03VEE65 pKa = 5.28CDD67 pKa = 3.8NAKK70 pKa = 10.47CGQDD74 pKa = 3.56LLSKK78 pKa = 10.64IKK80 pKa = 10.77GFFYY84 pKa = 10.82NLSLGFNTDD93 pKa = 2.83SKK95 pKa = 10.64PEE97 pKa = 3.84EE98 pKa = 4.08RR99 pKa = 11.84APPSLVRR106 pKa = 11.84PALQEE111 pKa = 4.05EE112 pKa = 4.28DD113 pKa = 2.8WDD115 pKa = 3.99YY116 pKa = 11.92CEE118 pKa = 6.01EE119 pKa = 4.7DD120 pKa = 4.59DD121 pKa = 5.72EE122 pKa = 5.25EE123 pKa = 4.38NLL125 pKa = 4.32

Molecular weight: 14.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0L7QRY3|A0A0L7QRY3_9HYME Uncharacterized protein OS=Habropoda laboriosa OX=597456 GN=WH47_06090 PE=4 SV=1
PP1 pKa = 7.09NSKK4 pKa = 10.45SPTSRR9 pKa = 11.84GPKK12 pKa = 9.56SKK14 pKa = 10.84SPTSKK19 pKa = 10.54GPKK22 pKa = 9.51SKK24 pKa = 10.51IPTSKK29 pKa = 10.54GPKK32 pKa = 9.44SKK34 pKa = 10.52IPTFKK39 pKa = 10.68GPKK42 pKa = 9.18SKK44 pKa = 11.0SPTSKK49 pKa = 10.54GPKK52 pKa = 9.12SKK54 pKa = 10.87SPTSRR59 pKa = 11.84GPKK62 pKa = 9.56SKK64 pKa = 10.84SPTSKK69 pKa = 10.57GPKK72 pKa = 9.39SKK74 pKa = 10.4ISTFKK79 pKa = 10.76GPKK82 pKa = 9.38SKK84 pKa = 11.01SPTSKK89 pKa = 10.71SPTSKK94 pKa = 10.56GPKK97 pKa = 9.14SKK99 pKa = 10.98SPTFKK104 pKa = 10.69GPKK107 pKa = 9.22SKK109 pKa = 11.0SPTSKK114 pKa = 10.54GPKK117 pKa = 9.22SKK119 pKa = 10.95SPTSKK124 pKa = 10.54GPKK127 pKa = 9.04SKK129 pKa = 10.67SPKK132 pKa = 9.55FKK134 pKa = 10.34VSKK137 pKa = 10.49FKK139 pKa = 10.69ILNSKK144 pKa = 10.47SPTFKK149 pKa = 10.65SPKK152 pKa = 9.47SKK154 pKa = 10.93SPTSKK159 pKa = 10.54GPKK162 pKa = 9.22SKK164 pKa = 10.95SPTSKK169 pKa = 10.54GPKK172 pKa = 9.17SKK174 pKa = 10.59SPKK177 pKa = 9.79SKK179 pKa = 10.43GPKK182 pKa = 9.16SKK184 pKa = 10.62SPKK187 pKa = 9.19FKK189 pKa = 10.74SPRR192 pKa = 11.84AQSQRR197 pKa = 11.84VQSPRR202 pKa = 11.84AKK204 pKa = 10.41NN205 pKa = 3.16

Molecular weight: 21.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12781

0

12781

5864692

25

18728

458.9

51.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.904 ± 0.024

2.045 ± 0.041

5.253 ± 0.018

6.994 ± 0.042

3.594 ± 0.018

5.456 ± 0.033

2.487 ± 0.013

5.728 ± 0.021

6.557 ± 0.035

8.987 ± 0.034

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.205 ± 0.011

5.162 ± 0.022

5.024 ± 0.033

4.254 ± 0.022

5.661 ± 0.031

8.129 ± 0.031

6.077 ± 0.033

6.131 ± 0.019

1.088 ± 0.008

3.156 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski