Banna virus (strain Indonesia/JKT-6423/1980) (BAV)

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Seadornavirus; Banna virus

Average proteome isoelectric point is 6.24

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q9YWQ1|SPIKE_BAVJK Spike protein VP9 OS=Banna virus (strain Indonesia/JKT-6423/1980) OX=649604 GN=Segment-9 PE=4 SV=1
MM1 pKa = 7.58NNGQATITRR10 pKa = 11.84NGGRR14 pKa = 11.84FEE16 pKa = 3.86IRR18 pKa = 11.84CRR20 pKa = 11.84HH21 pKa = 6.29LDD23 pKa = 3.27RR24 pKa = 11.84DD25 pKa = 3.85YY26 pKa = 11.97TMPLPNATSNDD37 pKa = 3.34NFLDD41 pKa = 4.43CIKK44 pKa = 10.76FITEE48 pKa = 4.25CVGFDD53 pKa = 3.58YY54 pKa = 11.12VSSGFKK60 pKa = 10.73LIANVNDD67 pKa = 3.91FQHH70 pKa = 6.83LNGNSTLLIGKK81 pKa = 6.81TKK83 pKa = 10.22IGPLILKK90 pKa = 9.61KK91 pKa = 10.56VRR93 pKa = 11.84SLPCCNDD100 pKa = 2.73ALFRR104 pKa = 11.84NEE106 pKa = 3.65FRR108 pKa = 11.84ILAKK112 pKa = 9.4MHH114 pKa = 6.73GILRR118 pKa = 11.84LKK120 pKa = 10.76NDD122 pKa = 3.79VNGHH126 pKa = 5.98KK127 pKa = 10.52YY128 pKa = 10.62GIILEE133 pKa = 4.24RR134 pKa = 11.84CYY136 pKa = 10.65KK137 pKa = 10.4PKK139 pKa = 10.47INFSNFVTAINDD151 pKa = 3.43LDD153 pKa = 3.94VFHH156 pKa = 7.5SSNQHH161 pKa = 6.12LLHH164 pKa = 7.23GDD166 pKa = 3.77ANPDD170 pKa = 3.48NIMSDD175 pKa = 3.34SEE177 pKa = 5.06GYY179 pKa = 10.43LKK181 pKa = 10.89LVDD184 pKa = 4.09PVCLLEE190 pKa = 4.24NQVNMVNIEE199 pKa = 4.14YY200 pKa = 10.47EE201 pKa = 4.31SLTQEE206 pKa = 3.92AEE208 pKa = 3.81KK209 pKa = 10.78KK210 pKa = 10.59VFINSLLQLVEE221 pKa = 4.27KK222 pKa = 10.74QMSATIDD229 pKa = 3.64EE230 pKa = 4.82IYY232 pKa = 11.44VNLKK236 pKa = 9.35EE237 pKa = 4.33VNPSFNLEE245 pKa = 4.18HH246 pKa = 6.51GLKK249 pKa = 10.75LSDD252 pKa = 4.19LLDD255 pKa = 4.56NIDD258 pKa = 4.9VYY260 pKa = 11.67NSDD263 pKa = 3.01HH264 pKa = 6.62WKK266 pKa = 10.84LMLNHH271 pKa = 6.77RR272 pKa = 11.84PMMPEE277 pKa = 4.24LSVLNDD283 pKa = 3.14LTYY286 pKa = 11.04YY287 pKa = 9.85DD288 pKa = 3.74TGEE291 pKa = 4.02VRR293 pKa = 11.84DD294 pKa = 4.92LVTEE298 pKa = 4.48DD299 pKa = 5.56LDD301 pKa = 6.27DD302 pKa = 4.69EE303 pKa = 5.88DD304 pKa = 5.88DD305 pKa = 3.7VV306 pKa = 4.58

Molecular weight: 34.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q9INI5|VP2_BAVJK Major inner capsid protein VP2 OS=Banna virus (strain Indonesia/JKT-6423/1980) OX=649604 GN=Segment-2 PE=4 SV=1
MM1 pKa = 7.61EE2 pKa = 5.84LFSDD6 pKa = 3.55SGSIVEE12 pKa = 4.36NFKK15 pKa = 11.04EE16 pKa = 4.34RR17 pKa = 11.84INKK20 pKa = 9.24LVFDD24 pKa = 4.1YY25 pKa = 11.16SLNHH29 pKa = 5.68GGFRR33 pKa = 11.84KK34 pKa = 8.52TYY36 pKa = 9.17KK37 pKa = 9.19IQRR40 pKa = 11.84DD41 pKa = 3.27RR42 pKa = 11.84VYY44 pKa = 11.67YY45 pKa = 9.25MLGDD49 pKa = 3.5AHH51 pKa = 6.7HH52 pKa = 7.28ANLSGKK58 pKa = 9.98CLMLYY63 pKa = 10.4NSEE66 pKa = 4.0KK67 pKa = 10.9DD68 pKa = 3.02IFEE71 pKa = 4.24GLGFKK76 pKa = 10.71VKK78 pKa = 10.3GSRR81 pKa = 11.84INVSKK86 pKa = 9.03TQILRR91 pKa = 11.84NYY93 pKa = 8.43EE94 pKa = 3.98INFEE98 pKa = 4.39TIIGVEE104 pKa = 3.99PNGLKK109 pKa = 9.92TISTAKK115 pKa = 10.14DD116 pKa = 3.16VKK118 pKa = 10.45KK119 pKa = 10.81LYY121 pKa = 10.41DD122 pKa = 3.18IYY124 pKa = 11.03SYY126 pKa = 11.08KK127 pKa = 10.67SSLHH131 pKa = 6.18PFDD134 pKa = 6.02DD135 pKa = 5.81FMAHH139 pKa = 7.35CINRR143 pKa = 11.84WGMSIPASLEE153 pKa = 3.85RR154 pKa = 11.84IIKK157 pKa = 10.12SEE159 pKa = 3.96IIKK162 pKa = 10.07VRR164 pKa = 11.84SGVLNRR170 pKa = 11.84NSEE173 pKa = 4.51LYY175 pKa = 10.73NYY177 pKa = 9.61IPTVDD182 pKa = 3.5ASFSEE187 pKa = 4.79MSRR190 pKa = 11.84GPANVILTDD199 pKa = 3.79GKK201 pKa = 10.65LVPDD205 pKa = 4.64GTCFGPILSKK215 pKa = 10.81SVEE218 pKa = 4.06DD219 pKa = 3.71PRR221 pKa = 11.84LKK223 pKa = 11.05NEE225 pKa = 3.86FRR227 pKa = 11.84SKK229 pKa = 10.8GLIMVHH235 pKa = 7.33DD236 pKa = 4.18YY237 pKa = 10.97FILIGEE243 pKa = 4.55SPGPHH248 pKa = 5.03YY249 pKa = 10.78KK250 pKa = 10.46KK251 pKa = 8.89YY252 pKa = 9.71TKK254 pKa = 7.8MTKK257 pKa = 10.43DD258 pKa = 3.11NTIFWDD264 pKa = 3.96PRR266 pKa = 11.84RR267 pKa = 11.84TDD269 pKa = 3.04HH270 pKa = 7.02KK271 pKa = 10.45FNNVVSYY278 pKa = 9.21FKK280 pKa = 10.84KK281 pKa = 9.98EE282 pKa = 4.01NIRR285 pKa = 11.84DD286 pKa = 3.79VVEE289 pKa = 4.17YY290 pKa = 8.22TTDD293 pKa = 3.1ALNRR297 pKa = 11.84GLKK300 pKa = 9.91PLVLIDD306 pKa = 3.62IRR308 pKa = 11.84KK309 pKa = 9.96DD310 pKa = 3.09KK311 pKa = 10.7PKK313 pKa = 10.9NLNTPEE319 pKa = 4.16GAIEE323 pKa = 4.15WEE325 pKa = 4.36RR326 pKa = 11.84MVHH329 pKa = 7.07DD330 pKa = 5.4DD331 pKa = 3.76NNLIIDD337 pKa = 4.22MVNALDD343 pKa = 4.89KK344 pKa = 10.97RR345 pKa = 11.84VTVCAKK351 pKa = 10.06LRR353 pKa = 11.84PAFMQVGSMRR363 pKa = 11.84KK364 pKa = 8.67LLRR367 pKa = 11.84PVRR370 pKa = 11.84ILPLPYY376 pKa = 9.98LRR378 pKa = 11.84RR379 pKa = 11.84STAEE383 pKa = 3.44FNMFVPNEE391 pKa = 3.6ALMNGNEE398 pKa = 4.45IYY400 pKa = 10.7DD401 pKa = 3.58VTYY404 pKa = 11.16DD405 pKa = 3.53DD406 pKa = 4.63LVRR409 pKa = 11.84MSSEE413 pKa = 3.93VFVLKK418 pKa = 10.86NIIGGLYY425 pKa = 10.64NMYY428 pKa = 10.47LKK430 pKa = 10.85DD431 pKa = 3.22MHH433 pKa = 7.11LNLGVVNKK441 pKa = 10.26SVSLSDD447 pKa = 3.37GSSAIWSLSNINNEE461 pKa = 4.25RR462 pKa = 11.84ISNFNFNNFLYY473 pKa = 10.33AAPYY477 pKa = 10.6SDD479 pKa = 4.27FATSSVKK486 pKa = 10.39RR487 pKa = 11.84HH488 pKa = 4.98FKK490 pKa = 9.63GRR492 pKa = 11.84NYY494 pKa = 10.74SDD496 pKa = 2.98WCLNILDD503 pKa = 4.57EE504 pKa = 4.76VNLKK508 pKa = 10.88DD509 pKa = 4.12GVYY512 pKa = 10.25LVPLYY517 pKa = 10.79AIVGGGQITSHH528 pKa = 6.86DD529 pKa = 4.03FVNAIITDD537 pKa = 3.74QEE539 pKa = 3.96QLIDD543 pKa = 3.71FTQSEE548 pKa = 4.86RR549 pKa = 11.84ALSTQVVKK557 pKa = 10.75LVSFILKK564 pKa = 10.48DD565 pKa = 3.34SFTAKK570 pKa = 9.98GLNWTEE576 pKa = 3.29IDD578 pKa = 3.35NEE580 pKa = 3.79IRR582 pKa = 11.84NRR584 pKa = 11.84RR585 pKa = 11.84LSSLSGVGFTVTKK598 pKa = 10.1MLDD601 pKa = 3.34GKK603 pKa = 10.59VLVDD607 pKa = 3.66GKK609 pKa = 10.72VVTVSGHH616 pKa = 4.53MLYY619 pKa = 10.1ILLGSILGLPYY630 pKa = 10.6GIKK633 pKa = 10.13KK634 pKa = 9.14YY635 pKa = 10.78LKK637 pKa = 9.99EE638 pKa = 3.99IEE640 pKa = 4.44LNILKK645 pKa = 10.07PGSSYY650 pKa = 10.95EE651 pKa = 3.93RR652 pKa = 11.84GVGGRR657 pKa = 11.84VWHH660 pKa = 6.14GLISHH665 pKa = 6.58YY666 pKa = 10.79LAVDD670 pKa = 3.59CVIDD674 pKa = 4.55VIDD677 pKa = 4.4EE678 pKa = 4.4YY679 pKa = 10.7MVCTYY684 pKa = 10.44EE685 pKa = 5.62DD686 pKa = 3.62RR687 pKa = 11.84SKK689 pKa = 11.58LNVVLRR695 pKa = 11.84YY696 pKa = 9.79VKK698 pKa = 10.64SKK700 pKa = 10.72LLEE703 pKa = 4.63LGSKK707 pKa = 9.79YY708 pKa = 10.61DD709 pKa = 3.28VYY711 pKa = 11.43LSVDD715 pKa = 3.18EE716 pKa = 4.78RR717 pKa = 11.84LVLL720 pKa = 4.14

Molecular weight: 82.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12

0

12

5924

180

1214

493.7

55.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.313 ± 0.493

1.266 ± 0.201

6.6 ± 0.311

5.334 ± 0.208

3.764 ± 0.281

5.385 ± 0.302

2.296 ± 0.211

6.769 ± 0.266

6.617 ± 0.347

9.217 ± 0.332

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.684 ± 0.102

6.769 ± 0.267

3.309 ± 0.373

3.022 ± 0.388

4.693 ± 0.333

7.36 ± 0.363

5.807 ± 0.418

7.917 ± 0.268

0.608 ± 0.121

4.271 ± 0.223
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski