Aquimarina algiphila

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6064 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A554VIL8|A0A554VIL8_9FLAO Uncharacterized protein OS=Aquimarina algiphila OX=2047982 GN=FOF46_15305 PE=4 SV=1
MM1 pKa = 7.3NKK3 pKa = 8.26KK4 pKa = 8.54TYY6 pKa = 10.25LIVVILLTISKK17 pKa = 10.41GLFAQTMTLTSNAPSNTICRR37 pKa = 11.84GDD39 pKa = 3.85IIQVDD44 pKa = 4.21VNITPPNGASGYY56 pKa = 9.43NWTNVTTGQFIKK68 pKa = 10.62SVNGNAGTFHH78 pKa = 7.52LFTGVDD84 pKa = 3.27RR85 pKa = 11.84LLTNSTIRR93 pKa = 11.84VEE95 pKa = 4.4AFGGTGGNLSQTIDD109 pKa = 3.85IIVQQPANPGTEE121 pKa = 4.24GNLLLCNKK129 pKa = 9.35TGDD132 pKa = 3.39IDD134 pKa = 6.3LFTLLQGNPDD144 pKa = 4.2RR145 pKa = 11.84GGTWDD150 pKa = 3.99PPLANGDD157 pKa = 3.59RR158 pKa = 11.84GTFTIGTDD166 pKa = 3.06TPGIYY171 pKa = 9.35RR172 pKa = 11.84YY173 pKa = 8.8MISATAPCSDD183 pKa = 3.44SEE185 pKa = 4.41SRR187 pKa = 11.84VVVKK191 pKa = 10.55EE192 pKa = 4.01CFNDD196 pKa = 4.2DD197 pKa = 3.63FDD199 pKa = 6.03NDD201 pKa = 3.81GVNNKK206 pKa = 9.96DD207 pKa = 5.79DD208 pKa = 5.77LDD210 pKa = 5.14DD211 pKa = 5.77DD212 pKa = 4.37NDD214 pKa = 4.97GILDD218 pKa = 3.76SVEE221 pKa = 4.59NSACTSATLTEE232 pKa = 4.34SSPVVDD238 pKa = 3.69IDD240 pKa = 3.88FGTGNTPTTDD250 pKa = 3.64PNIQGHH256 pKa = 4.65QHH258 pKa = 5.51NPNWPDD264 pKa = 3.18DD265 pKa = 3.69GFYY268 pKa = 11.22NVANSLYY275 pKa = 9.25MFNSANFDD283 pKa = 3.26VWFITTDD290 pKa = 3.6TNPVPHH296 pKa = 7.05SDD298 pKa = 3.72GNGDD302 pKa = 3.4VNGRR306 pKa = 11.84FLAVNIASNFGNKK319 pKa = 7.89VLYY322 pKa = 9.05EE323 pKa = 4.18LKK325 pKa = 10.41DD326 pKa = 3.4IPISAGIQYY335 pKa = 10.08NFRR338 pKa = 11.84IDD340 pKa = 3.68MVGLCDD346 pKa = 4.59RR347 pKa = 11.84GCADD351 pKa = 4.29VPALDD356 pKa = 5.7LEE358 pKa = 5.61IIDD361 pKa = 3.78QTTGNTILSTTSAALGVANDD381 pKa = 4.76DD382 pKa = 2.82IWRR385 pKa = 11.84TLLDD389 pKa = 5.53DD390 pKa = 3.37ITVPTNTLLTLRR402 pKa = 11.84IRR404 pKa = 11.84NQQLQGSNGNDD415 pKa = 2.72IGIDD419 pKa = 3.59NIRR422 pKa = 11.84FAPLEE427 pKa = 4.35CDD429 pKa = 3.14SDD431 pKa = 4.25RR432 pKa = 11.84DD433 pKa = 3.8EE434 pKa = 4.83VPNFLDD440 pKa = 4.93LDD442 pKa = 4.27CDD444 pKa = 3.47NDD446 pKa = 4.78GIFDD450 pKa = 4.34IIEE453 pKa = 4.33AGRR456 pKa = 11.84SDD458 pKa = 5.5LDD460 pKa = 3.92TNGDD464 pKa = 3.96GIVDD468 pKa = 5.01GIRR471 pKa = 11.84DD472 pKa = 3.69TDD474 pKa = 3.48GDD476 pKa = 4.2GIADD480 pKa = 3.42VGVDD484 pKa = 3.66VNGVPIAASGGLTPISSDD502 pKa = 3.16GDD504 pKa = 3.84GLPDD508 pKa = 4.19YY509 pKa = 11.35LDD511 pKa = 3.91IDD513 pKa = 4.42ADD515 pKa = 3.73NDD517 pKa = 4.65GIQDD521 pKa = 4.06NIEE524 pKa = 4.07GQATLTYY531 pKa = 9.9IAPSGNDD538 pKa = 3.33LNKK541 pKa = 10.79NGVDD545 pKa = 3.58DD546 pKa = 4.99AYY548 pKa = 10.32EE549 pKa = 4.42GVGSITPVNTDD560 pKa = 2.75TDD562 pKa = 4.08TLPDD566 pKa = 3.97YY567 pKa = 11.49LDD569 pKa = 4.86LNSDD573 pKa = 4.17DD574 pKa = 5.57DD575 pKa = 4.32CLNDD579 pKa = 3.6TVEE582 pKa = 5.45AYY584 pKa = 10.25DD585 pKa = 4.56LNLDD589 pKa = 4.49GISDD593 pKa = 3.75ITAIGTDD600 pKa = 3.46TDD602 pKa = 3.7NDD604 pKa = 3.76GMDD607 pKa = 3.24NAFDD611 pKa = 4.26IVILDD616 pKa = 4.0ALTAITNPTDD626 pKa = 3.49NGEE629 pKa = 4.45LPTDD633 pKa = 4.18LPNNHH638 pKa = 6.85NIGGDD643 pKa = 3.06VDD645 pKa = 4.2FRR647 pKa = 11.84EE648 pKa = 4.24EE649 pKa = 3.91FKK651 pKa = 11.16KK652 pKa = 10.84VDD654 pKa = 3.6EE655 pKa = 4.78KK656 pKa = 10.79KK657 pKa = 8.85TAGGCASGIPTINLFDD673 pKa = 4.2SLVDD677 pKa = 3.48AAIPGGTWSGPSVLTGGEE695 pKa = 4.06SGTFNATTNVAGTYY709 pKa = 9.14TYY711 pKa = 9.84TLPTIGLCPSRR722 pKa = 11.84KK723 pKa = 9.92GEE725 pKa = 4.1VKK727 pKa = 10.56VSIISTSDD735 pKa = 2.81PGTNGTLNTCVLVTTPINLFDD756 pKa = 4.25SLGGTPDD763 pKa = 3.51TGGSWTDD770 pKa = 3.27PNGNPFGTTDD780 pKa = 3.3QGVLNPSATGTLQGTYY796 pKa = 9.83VYY798 pKa = 10.31TIGTTGCSSSANVEE812 pKa = 4.03VTINPGANAGLDD824 pKa = 3.53NKK826 pKa = 10.25VSFCSTQSSINLFDD840 pKa = 4.14SLEE843 pKa = 4.27GTPDD847 pKa = 3.33TGGSWIDD854 pKa = 3.42PNGNPFGTTDD864 pKa = 3.74QGVLDD869 pKa = 4.55PSLTTTLSGDD879 pKa = 3.57YY880 pKa = 9.66IYY882 pKa = 10.53TVSATTCPIQDD893 pKa = 3.62TAIVTVTIEE902 pKa = 3.79IAPNPGTNSSLEE914 pKa = 3.82ICTNASAINLFDD926 pKa = 4.06SLRR929 pKa = 11.84GAPTTGGTWTGPGGATFGTNDD950 pKa = 3.4KK951 pKa = 11.69GEE953 pKa = 4.42FNPASDD959 pKa = 3.61AAGTYY964 pKa = 9.19TYY966 pKa = 7.58TTGTIACNNTATITVTINPAANAGEE991 pKa = 4.11DD992 pKa = 3.61NKK994 pKa = 10.37VSFCSTDD1001 pKa = 2.7TTMNLFDD1008 pKa = 4.75SLGGSPNIGGSWTDD1022 pKa = 3.26PNGNPFGTTDD1032 pKa = 3.45QGIIDD1037 pKa = 4.45PSATTTLSGDD1047 pKa = 3.32YY1048 pKa = 9.54TYY1050 pKa = 10.8TVSTGKK1056 pKa = 8.55CTIPDD1061 pKa = 3.29IAKK1064 pKa = 7.59ITVVIEE1070 pKa = 4.03TTPSISFDD1078 pKa = 3.12KK1079 pKa = 8.29TTCSDD1084 pKa = 3.34DD1085 pKa = 3.72RR1086 pKa = 11.84NSYY1089 pKa = 10.4SVSFTSNEE1097 pKa = 3.83TWSITIDD1104 pKa = 3.63PPNAGIIDD1112 pKa = 3.92VTNSMITGIASDD1124 pKa = 3.74TNIIITATNPANTTCEE1140 pKa = 3.87DD1141 pKa = 3.96TLNIIAPDD1149 pKa = 4.03CTCPDD1154 pKa = 2.81ITEE1157 pKa = 4.25PTNPIHH1163 pKa = 7.07QRR1165 pKa = 11.84ICAGDD1170 pKa = 3.73TNPVLSVTVLTDD1182 pKa = 3.2QTANWYY1188 pKa = 7.21TQDD1191 pKa = 3.12GTLLVANTTTYY1202 pKa = 10.7TPIEE1206 pKa = 4.25TAIGTYY1212 pKa = 8.94TYY1214 pKa = 10.94SVEE1217 pKa = 4.95AFDD1220 pKa = 5.58NNEE1223 pKa = 3.91KK1224 pKa = 10.66CPSDD1228 pKa = 4.58RR1229 pKa = 11.84IPVFFDD1235 pKa = 2.65IVTAPEE1241 pKa = 3.8ITLSSDD1247 pKa = 3.25SAICVSEE1254 pKa = 4.92DD1255 pKa = 3.7GVPLPTNDD1263 pKa = 3.96FPFIDD1268 pKa = 3.89TFLNTTDD1275 pKa = 4.5FTFIWSFEE1283 pKa = 4.02GTVIPGQNSSGIEE1296 pKa = 3.83TLLPGTYY1303 pKa = 8.62TVQYY1307 pKa = 8.01TDD1309 pKa = 3.73KK1310 pKa = 11.33VSMCSDD1316 pKa = 3.62TSSVTINAIEE1326 pKa = 4.67GPQRR1330 pKa = 11.84LDD1332 pKa = 3.16LSLSLGTFADD1342 pKa = 3.87HH1343 pKa = 7.04NDD1345 pKa = 3.43IIATVAGNSEE1355 pKa = 4.53YY1356 pKa = 10.75EE1357 pKa = 3.9FSLDD1361 pKa = 3.2NGSFQTEE1368 pKa = 3.95NIFRR1372 pKa = 11.84NVALGLHH1379 pKa = 5.99EE1380 pKa = 4.24VTVRR1384 pKa = 11.84DD1385 pKa = 3.84IYY1387 pKa = 11.61GCGNLSKK1394 pKa = 10.3EE1395 pKa = 4.08IFVMGFPNFFTPNNDD1410 pKa = 4.37GINDD1414 pKa = 3.78TWNVIADD1421 pKa = 3.8EE1422 pKa = 4.8NLPEE1426 pKa = 4.0MIIYY1430 pKa = 10.32IFDD1433 pKa = 3.74RR1434 pKa = 11.84YY1435 pKa = 10.59GKK1437 pKa = 10.18LLSQLNPNGPGWDD1450 pKa = 3.74GIYY1453 pKa = 10.46NGRR1456 pKa = 11.84TLPSTDD1462 pKa = 2.89YY1463 pKa = 10.76WFAAQFKK1470 pKa = 9.87DD1471 pKa = 3.51GSEE1474 pKa = 4.42TYY1476 pKa = 10.07RR1477 pKa = 11.84SHH1479 pKa = 6.77FTLKK1483 pKa = 10.44RR1484 pKa = 3.41

Molecular weight: 157.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A554VF87|A0A554VF87_9FLAO Uncharacterized protein OS=Aquimarina algiphila OX=2047982 GN=FOF46_21475 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.59RR3 pKa = 11.84TFQPSKK9 pKa = 10.15RR10 pKa = 11.84KK11 pKa = 9.6RR12 pKa = 11.84KK13 pKa = 8.29NKK15 pKa = 9.34HH16 pKa = 4.03GFRR19 pKa = 11.84EE20 pKa = 4.2RR21 pKa = 11.84MASANGRR28 pKa = 11.84KK29 pKa = 9.04VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.09GRR39 pKa = 11.84KK40 pKa = 7.97KK41 pKa = 10.66LSVSSEE47 pKa = 3.9LRR49 pKa = 11.84HH50 pKa = 5.43KK51 pKa = 10.29HH52 pKa = 5.04

Molecular weight: 6.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6064

0

6064

2018512

22

4042

332.9

37.69

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.706 ± 0.032

0.742 ± 0.011

5.737 ± 0.027

6.589 ± 0.031

5.153 ± 0.027

6.308 ± 0.034

1.78 ± 0.015

8.466 ± 0.028

7.899 ± 0.044

8.982 ± 0.035

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.014 ± 0.016

6.332 ± 0.032

3.351 ± 0.021

3.423 ± 0.018

3.508 ± 0.021

6.691 ± 0.024

6.161 ± 0.043

5.855 ± 0.022

1.089 ± 0.012

4.214 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski