Pseudoplusia includens SNPV IE

Taxonomy: Viruses; Naldaviricetes; Lefavirales; Baculoviridae; Alphabaculovirus; Chrysodeixis includens nucleopolyhedrovirus

Average proteome isoelectric point is 6.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 141 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4ZUP2|A0A0B4ZUP2_9ABAC Uncharacterized protein OS=Pseudoplusia includens SNPV IE OX=1592335 GN=ORF-111 PE=4 SV=1
MM1 pKa = 7.08FVSTEE6 pKa = 3.92EE7 pKa = 3.97VSRR10 pKa = 11.84GGLANIINMFAYY22 pKa = 9.65KK23 pKa = 10.41FIDD26 pKa = 3.26SDD28 pKa = 4.23YY29 pKa = 9.9EE30 pKa = 4.39NNVCTICEE38 pKa = 4.22SGFEE42 pKa = 4.0QYY44 pKa = 10.43EE45 pKa = 4.23PNVWTFRR52 pKa = 11.84VVEE55 pKa = 4.21KK56 pKa = 11.11NKK58 pKa = 10.35LNSIIYY64 pKa = 9.98CNICAEE70 pKa = 4.7EE71 pKa = 4.92IDD73 pKa = 5.99DD74 pKa = 5.7DD75 pKa = 6.54DD76 pKa = 4.7EE77 pKa = 6.33DD78 pKa = 4.3CFKK81 pKa = 10.79IALPASIEE89 pKa = 3.99DD90 pKa = 3.34QNRR93 pKa = 11.84FEE95 pKa = 4.43EE96 pKa = 4.37LLDD99 pKa = 3.8RR100 pKa = 11.84LIEE103 pKa = 4.5CGGVWLILNLVEE115 pKa = 5.7YY116 pKa = 10.31DD117 pKa = 3.22NCVNGNSIDD126 pKa = 3.81MEE128 pKa = 4.32TEE130 pKa = 3.55AFLKK134 pKa = 10.4VLRR137 pKa = 11.84FTSRR141 pKa = 11.84DD142 pKa = 3.03LDD144 pKa = 3.55RR145 pKa = 11.84PPNDD149 pKa = 3.3KK150 pKa = 10.42PGPINIIDD158 pKa = 4.12KK159 pKa = 10.49FCVSHH164 pKa = 6.57SLRR167 pKa = 11.84EE168 pKa = 3.96NYY170 pKa = 9.69INANILVDD178 pKa = 3.76KK179 pKa = 10.76LLNCTVDD186 pKa = 3.65MLPKK190 pKa = 10.38KK191 pKa = 10.55LNNCSRR197 pKa = 11.84EE198 pKa = 4.2KK199 pKa = 10.52FSHH202 pKa = 6.31ALSTFKK208 pKa = 10.82PNLLEE213 pKa = 5.62DD214 pKa = 3.76VLFSNTLVIPPEE226 pKa = 3.75NLYY229 pKa = 9.38TVMPTEE235 pKa = 4.93LNTLKK240 pKa = 10.55NQIYY244 pKa = 9.52EE245 pKa = 4.12VHH247 pKa = 5.99QLNDD251 pKa = 4.05DD252 pKa = 3.74EE253 pKa = 7.02DD254 pKa = 6.33DD255 pKa = 4.68NDD257 pKa = 4.0DD258 pKa = 3.74QEE260 pKa = 5.89KK261 pKa = 10.87DD262 pKa = 3.48FSSRR266 pKa = 11.84KK267 pKa = 8.21VSEE270 pKa = 3.88YY271 pKa = 10.98LIDD274 pKa = 3.87FLNDD278 pKa = 3.22FVSNYY283 pKa = 10.43NINPPNQHH291 pKa = 7.08AIMPYY296 pKa = 9.68CNSAAEE302 pKa = 3.93AMYY305 pKa = 11.02DD306 pKa = 3.34FDD308 pKa = 5.67LYY310 pKa = 11.53VYY312 pKa = 10.78APYY315 pKa = 11.04DD316 pKa = 3.36LL317 pKa = 5.52

Molecular weight: 36.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4ZUP8|A0A0B4ZUP8_9ABAC Alkaline exonuclease OS=Pseudoplusia includens SNPV IE OX=1592335 GN=ORF-121 PE=4 SV=1
MM1 pKa = 7.29VYY3 pKa = 10.2RR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84SSGRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84SSGGQYY18 pKa = 9.83RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84SSGSRR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84SSGGRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84SSGGRR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84SSGGQYY48 pKa = 9.84RR49 pKa = 11.84RR50 pKa = 11.84RR51 pKa = 11.84SGSRR55 pKa = 11.84RR56 pKa = 11.84RR57 pKa = 11.84SSGGRR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84RR65 pKa = 11.84PGRR68 pKa = 11.84PRR70 pKa = 11.84GRR72 pKa = 11.84RR73 pKa = 11.84SSSSGSRR80 pKa = 11.84NPYY83 pKa = 7.93GYY85 pKa = 10.07SRR87 pKa = 11.84RR88 pKa = 11.84RR89 pKa = 11.84YY90 pKa = 8.97

Molecular weight: 10.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

141

0

141

41865

49

1209

296.9

34.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.615 ± 0.157

2.069 ± 0.126

6.628 ± 0.173

5.587 ± 0.14

4.878 ± 0.146

3.363 ± 0.145

2.186 ± 0.103

7.835 ± 0.136

6.908 ± 0.25

8.969 ± 0.189

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.654 ± 0.081

7.949 ± 0.197

3.449 ± 0.148

3.669 ± 0.155

5.054 ± 0.166

7.123 ± 0.217

5.453 ± 0.128

6.012 ± 0.148

0.731 ± 0.053

4.844 ± 0.151
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski