Itaporanga virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Itaporanga phlebovirus

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1DW07|A0A4V1DW07_9VIRU Replicase OS=Itaporanga virus OX=629735 PE=4 SV=2
MM1 pKa = 7.11MRR3 pKa = 11.84FFHH6 pKa = 7.32PEE8 pKa = 3.38MPEE11 pKa = 3.64YY12 pKa = 11.01SFDD15 pKa = 3.6YY16 pKa = 10.1SKK18 pKa = 11.42EE19 pKa = 3.86GGRR22 pKa = 11.84VNVLYY27 pKa = 10.86VNKK30 pKa = 10.13FEE32 pKa = 4.22WTEE35 pKa = 4.22VPASYY40 pKa = 11.02HH41 pKa = 5.66MGSLIPLKK49 pKa = 10.31FVSLSRR55 pKa = 11.84KK56 pKa = 9.76KK57 pKa = 10.74FMNLKK62 pKa = 9.85EE63 pKa = 4.2FYY65 pKa = 10.78DD66 pKa = 4.5RR67 pKa = 11.84DD68 pKa = 4.11TLPLLWGDD76 pKa = 3.99CKK78 pKa = 10.76GSQVMGPSLNCFDD91 pKa = 5.47EE92 pKa = 4.68MIKK95 pKa = 9.62MLASIPLNDD104 pKa = 4.03FLAPSRR110 pKa = 11.84GHH112 pKa = 5.29TAHH115 pKa = 7.17GISWPTGSPDD125 pKa = 3.33LNYY128 pKa = 9.97IVYY131 pKa = 10.02SSKK134 pKa = 10.96DD135 pKa = 3.51INPEE139 pKa = 3.83SYY141 pKa = 10.69YY142 pKa = 10.74SRR144 pKa = 11.84CHH146 pKa = 5.0VASMLMNGAKK156 pKa = 10.31GNPSLDD162 pKa = 3.83LACVALHH169 pKa = 5.93KK170 pKa = 10.32KK171 pKa = 8.69IRR173 pKa = 11.84KK174 pKa = 8.42AAADD178 pKa = 3.42MGVSPEE184 pKa = 4.18LFSGRR189 pKa = 11.84NLVKK193 pKa = 10.56DD194 pKa = 3.78VACVQVISVLRR205 pKa = 11.84GAEE208 pKa = 3.43MDD210 pKa = 3.19QRR212 pKa = 11.84VFGKK216 pKa = 10.64GDD218 pKa = 3.65NLVDD222 pKa = 3.56WLVEE226 pKa = 3.67CAARR230 pKa = 11.84IRR232 pKa = 11.84TSDD235 pKa = 3.64PGCLGDD241 pKa = 4.86EE242 pKa = 4.1IGFGPRR248 pKa = 11.84CRR250 pKa = 11.84AIDD253 pKa = 3.98DD254 pKa = 4.3LDD256 pKa = 3.9RR257 pKa = 11.84CLEE260 pKa = 4.33GNDD263 pKa = 4.2SDD265 pKa = 5.76FSDD268 pKa = 5.13DD269 pKa = 4.51SSDD272 pKa = 4.1DD273 pKa = 3.42EE274 pKa = 4.46AAIAASNLSSVEE286 pKa = 3.85

Molecular weight: 31.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8D7T3|A0A4P8D7T3_9VIRU Glycoprotein OS=Itaporanga virus OX=629735 PE=4 SV=1
MM1 pKa = 7.65SDD3 pKa = 3.5YY4 pKa = 11.5ARR6 pKa = 11.84IALDD10 pKa = 4.11FYY12 pKa = 11.25EE13 pKa = 4.79NNPPTTNDD21 pKa = 2.65IAEE24 pKa = 4.28FVSLFAYY31 pKa = 9.81QGYY34 pKa = 9.1DD35 pKa = 2.58ARR37 pKa = 11.84TVVRR41 pKa = 11.84LVTEE45 pKa = 4.32RR46 pKa = 11.84GGGNWQEE53 pKa = 3.92DD54 pKa = 4.1VKK56 pKa = 11.21RR57 pKa = 11.84LIVLAATRR65 pKa = 11.84GNRR68 pKa = 11.84VNKK71 pKa = 9.29MKK73 pKa = 11.02AKK75 pKa = 10.07MSDD78 pKa = 3.05KK79 pKa = 11.15GKK81 pKa = 11.3GEE83 pKa = 3.96LTKK86 pKa = 10.83LVSTYY91 pKa = 10.65KK92 pKa = 10.61LKK94 pKa = 10.77EE95 pKa = 4.07GNPGRR100 pKa = 11.84EE101 pKa = 4.3DD102 pKa = 3.24LTLSRR107 pKa = 11.84VACAFATWTCTCITSIAEE125 pKa = 4.02YY126 pKa = 10.71LPVTGSTMDD135 pKa = 3.51SYY137 pKa = 11.8SPNYY141 pKa = 8.48PRR143 pKa = 11.84TMMHH147 pKa = 6.89PAFGGLIDD155 pKa = 3.99LTLPEE160 pKa = 5.24AEE162 pKa = 4.39TLVAAHH168 pKa = 6.56SLYY171 pKa = 10.94LNRR174 pKa = 11.84FAQVINPGLRR184 pKa = 11.84GKK186 pKa = 10.57SKK188 pKa = 11.36DD189 pKa = 3.51EE190 pKa = 3.86IQATFQQPLNAAANSSFITSEE211 pKa = 3.95NKK213 pKa = 9.94RR214 pKa = 11.84KK215 pKa = 9.52FLTKK219 pKa = 10.42FMLIDD224 pKa = 3.88SNLKK228 pKa = 7.46VTKK231 pKa = 10.36SVADD235 pKa = 3.35AAKK238 pKa = 10.18AYY240 pKa = 9.06KK241 pKa = 10.33ALNN244 pKa = 3.6

Molecular weight: 27.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3890

244

2094

972.5

108.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.578 ± 0.987

2.802 ± 0.876

5.604 ± 0.564

6.607 ± 0.807

4.576 ± 0.121

6.375 ± 0.442

2.262 ± 0.274

6.298 ± 0.603

6.35 ± 0.42

8.612 ± 0.249

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.828 ± 0.649

3.702 ± 0.491

4.293 ± 0.363

2.931 ± 0.444

5.193 ± 0.392

9.486 ± 1.009

5.681 ± 0.584

6.735 ± 0.273

1.183 ± 0.089

2.905 ± 0.295
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski