Leptonychotes weddellii papillomavirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses

Average proteome isoelectric point is 5.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2I8B2T9|A0A2I8B2T9_9PAPI Replication protein E1 OS=Leptonychotes weddellii papillomavirus 5 OX=2077306 GN=E1 PE=3 SV=1
MM1 pKa = 7.75APRR4 pKa = 11.84AARR7 pKa = 11.84RR8 pKa = 11.84KK9 pKa = 9.63RR10 pKa = 11.84ADD12 pKa = 3.1AGSLYY17 pKa = 9.95RR18 pKa = 11.84HH19 pKa = 6.46CVQGGDD25 pKa = 4.55CIPDD29 pKa = 3.28VVNKK33 pKa = 10.18FEE35 pKa = 5.09HH36 pKa = 6.18KK37 pKa = 9.55TPADD41 pKa = 4.87RR42 pKa = 11.84ILQIGGSLVYY52 pKa = 10.22FGGAGISTGRR62 pKa = 11.84GAGGYY67 pKa = 9.33RR68 pKa = 11.84PLGGTRR74 pKa = 11.84TFTFGSRR81 pKa = 11.84GAAGPGRR88 pKa = 11.84LPPLLADD95 pKa = 3.41TLGPVDD101 pKa = 3.36ATVYY105 pKa = 10.64EE106 pKa = 5.24GITFDD111 pKa = 3.8SPAVSVGVDD120 pKa = 3.32EE121 pKa = 5.44GPAIEE126 pKa = 4.48LTPIGGRR133 pKa = 11.84DD134 pKa = 3.72GQPGSGAPTISTTTDD149 pKa = 2.48SDD151 pKa = 4.06VAILEE156 pKa = 4.58VGTSTPSSRR165 pKa = 11.84PTSRR169 pKa = 11.84GGNVVSRR176 pKa = 11.84SQFEE180 pKa = 4.18NPTFVPTQPGTPGVGEE196 pKa = 4.74FSAQEE201 pKa = 4.18NILVDD206 pKa = 3.62HH207 pKa = 6.86SGGGVSVGEE216 pKa = 4.14FEE218 pKa = 4.93EE219 pKa = 5.75IEE221 pKa = 4.32LGDD224 pKa = 3.77LGEE227 pKa = 4.39RR228 pKa = 11.84TDD230 pKa = 3.53TGVPKK235 pKa = 10.49TSTPKK240 pKa = 10.42SRR242 pKa = 11.84LGDD245 pKa = 3.59LVSKK249 pKa = 10.89AKK251 pKa = 10.23SLYY254 pKa = 9.23NRR256 pKa = 11.84RR257 pKa = 11.84VTQTRR262 pKa = 11.84VEE264 pKa = 4.07NPEE267 pKa = 3.67FLGRR271 pKa = 11.84PSSLVEE277 pKa = 4.24FGFEE281 pKa = 3.87NPAFEE286 pKa = 5.31GDD288 pKa = 3.43VTLTFDD294 pKa = 4.18RR295 pKa = 11.84VQEE298 pKa = 4.06AKK300 pKa = 10.36AAPDD304 pKa = 3.3LAFRR308 pKa = 11.84DD309 pKa = 4.03IIKK312 pKa = 10.36LSRR315 pKa = 11.84PIYY318 pKa = 10.35SEE320 pKa = 4.21APGGRR325 pKa = 11.84VRR327 pKa = 11.84VSRR330 pKa = 11.84LGTKK334 pKa = 8.53GTIRR338 pKa = 11.84LRR340 pKa = 11.84SGTLIGGQTHH350 pKa = 6.1YY351 pKa = 10.82FRR353 pKa = 11.84DD354 pKa = 3.84LSSIGAPSLEE364 pKa = 4.03MSVLGQTSGEE374 pKa = 4.31STVVLGSDD382 pKa = 3.28SSIINGVGLEE392 pKa = 4.16GTVAFPEE399 pKa = 4.22EE400 pKa = 3.95QLLLDD405 pKa = 4.01EE406 pKa = 5.47LSEE409 pKa = 4.23NFQNSQLVFSDD420 pKa = 3.16SHH422 pKa = 6.4QSHH425 pKa = 7.19IIEE428 pKa = 4.55LPRR431 pKa = 11.84IAEE434 pKa = 4.41SPRR437 pKa = 11.84SSYY440 pKa = 11.04VIYY443 pKa = 8.8DD444 pKa = 3.8TADD447 pKa = 3.37STVVSHH453 pKa = 7.18KK454 pKa = 10.86GNEE457 pKa = 3.95NYY459 pKa = 10.28FISTLTPPDD468 pKa = 4.05TEE470 pKa = 5.23PDD472 pKa = 3.91TEE474 pKa = 4.26PQTPDD479 pKa = 3.01EE480 pKa = 4.47TPRR483 pKa = 11.84APRR486 pKa = 11.84RR487 pKa = 11.84PLDD490 pKa = 4.3DD491 pKa = 4.25SDD493 pKa = 5.1GLTFDD498 pKa = 4.33LHH500 pKa = 6.56PGLLRR505 pKa = 11.84RR506 pKa = 11.84KK507 pKa = 8.63KK508 pKa = 10.4KK509 pKa = 9.51RR510 pKa = 11.84VRR512 pKa = 11.84YY513 pKa = 9.54YY514 pKa = 10.22IEE516 pKa = 3.8

Molecular weight: 55.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I8B2Q3|A0A2I8B2Q3_9PAPI Protein E7 OS=Leptonychotes weddellii papillomavirus 5 OX=2077306 GN=E7 PE=3 SV=1
MM1 pKa = 7.89EE2 pKa = 5.27KK3 pKa = 10.31PQTLRR8 pKa = 11.84ALAASLGEE16 pKa = 3.86PLQRR20 pKa = 11.84ILVQCVFCGAPMTWPDD36 pKa = 3.41KK37 pKa = 10.98VAFEE41 pKa = 4.32NKK43 pKa = 9.13CLSVVWCRR51 pKa = 11.84EE52 pKa = 3.82RR53 pKa = 11.84FFGACVSCTNVRR65 pKa = 11.84SYY67 pKa = 11.33WDD69 pKa = 3.3VLNNRR74 pKa = 11.84GPTLEE79 pKa = 4.04ATGVEE84 pKa = 4.36SLFNKK89 pKa = 9.41PLSDD93 pKa = 3.24IPVRR97 pKa = 11.84CMYY100 pKa = 10.58CLAQLTVLEE109 pKa = 5.16KK110 pKa = 10.34IACAVNEE117 pKa = 4.2RR118 pKa = 11.84PFVLVRR124 pKa = 11.84KK125 pKa = 9.44LFRR128 pKa = 11.84NTCSEE133 pKa = 3.98CTQYY137 pKa = 11.38DD138 pKa = 3.55RR139 pKa = 11.84SS140 pKa = 3.74

Molecular weight: 15.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2416

121

601

402.7

44.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.381 ± 0.584

2.442 ± 0.707

6.167 ± 0.327

6.871 ± 0.517

4.553 ± 0.57

8.609 ± 1.142

1.987 ± 0.211

3.684 ± 0.265

5.05 ± 0.799

8.609 ± 0.445

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.78 ± 0.326

3.56 ± 0.521

6.747 ± 0.658

3.518 ± 0.484

6.291 ± 0.714

8.195 ± 0.432

6.25 ± 0.534

6.167 ± 0.665

1.242 ± 0.291

2.897 ± 0.385
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski