Macaca mulatta papillomavirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Gammapapillomavirus; unclassified Gammapapillomavirus

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A386JT72|A0A386JT72_9PAPI Replication protein E1 OS=Macaca mulatta papillomavirus 5 OX=2364645 GN=E1 PE=3 SV=1
MM1 pKa = 7.34QGEE4 pKa = 4.59APTLKK9 pKa = 10.73DD10 pKa = 2.75IVLEE14 pKa = 4.05FEE16 pKa = 4.3EE17 pKa = 6.31DD18 pKa = 3.29ILPVNLLSEE27 pKa = 4.52EE28 pKa = 4.41DD29 pKa = 3.57LSQEE33 pKa = 4.25EE34 pKa = 4.37EE35 pKa = 4.39LEE37 pKa = 4.24EE38 pKa = 4.67PDD40 pKa = 3.32RR41 pKa = 11.84SPYY44 pKa = 10.88SVVTHH49 pKa = 6.93CDD51 pKa = 2.69RR52 pKa = 11.84CAKK55 pKa = 9.8SLRR58 pKa = 11.84IVVIATKK65 pKa = 10.63DD66 pKa = 3.43SVRR69 pKa = 11.84SLEE72 pKa = 3.98TLLFGSLSLLCPPCARR88 pKa = 11.84SLRR91 pKa = 11.84HH92 pKa = 5.8GRR94 pKa = 3.52

Molecular weight: 10.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A386JT15|A0A386JT15_9PAPI Protein E7 OS=Macaca mulatta papillomavirus 5 OX=2364645 GN=E7 PE=3 SV=1
MM1 pKa = 7.75EE2 pKa = 5.66PPSTLQYY9 pKa = 11.2LCNLCNIRR17 pKa = 11.84LDD19 pKa = 3.73QLQIPCVFCKK29 pKa = 10.8LNLSLFDD36 pKa = 3.58LHH38 pKa = 6.8HH39 pKa = 6.7FSVLNLNLLLRR50 pKa = 11.84DD51 pKa = 3.57TVFYY55 pKa = 10.39GCCRR59 pKa = 11.84KK60 pKa = 9.81CLHH63 pKa = 6.76LSAAYY68 pKa = 9.44EE69 pKa = 4.2FYY71 pKa = 10.72KK72 pKa = 10.71YY73 pKa = 8.66YY74 pKa = 10.35QCSADD79 pKa = 3.15IEE81 pKa = 4.85YY82 pKa = 8.69ITVLSSEE89 pKa = 4.38TLGRR93 pKa = 11.84LQIRR97 pKa = 11.84CEE99 pKa = 3.95TCMKK103 pKa = 10.49RR104 pKa = 11.84LTVTEE109 pKa = 4.76KK110 pKa = 10.89YY111 pKa = 10.74DD112 pKa = 3.81CVSNKK117 pKa = 10.0DD118 pKa = 3.02KK119 pKa = 11.12CHH121 pKa = 6.01LVRR124 pKa = 11.84GIWRR128 pKa = 11.84APCRR132 pKa = 11.84LCRR135 pKa = 11.84KK136 pKa = 9.32KK137 pKa = 10.81

Molecular weight: 16.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2425

94

610

346.4

38.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.608 ± 0.649

2.062 ± 0.888

6.557 ± 0.372

6.639 ± 0.949

4.495 ± 0.48

6.392 ± 0.907

1.897 ± 0.309

5.113 ± 0.494

5.278 ± 0.775

9.155 ± 1.089

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.526 ± 0.276

4.412 ± 0.467

6.103 ± 1.034

3.794 ± 0.367

5.938 ± 0.866

8.33 ± 0.65

6.144 ± 0.913

5.979 ± 0.362

1.155 ± 0.272

3.423 ± 0.51
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski