Bacteriovorax sp. BSW11_IV

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Oligoflexia; Bacteriovoracales; Bacteriovoracaceae; Bacteriovorax; unclassified Bacteriovorax

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3457 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|T0RE05|T0RE05_9PROT Peptidase MA family protein OS=Bacteriovorax sp. BSW11_IV OX=1353529 GN=M899_0510 PE=4 SV=1
MM1 pKa = 7.49KK2 pKa = 10.56KK3 pKa = 10.27LMAFIFLSLLFSSCKK18 pKa = 9.68NQMNVEE24 pKa = 4.15LNDD27 pKa = 4.36LIKK30 pKa = 11.18ANASYY35 pKa = 11.29GDD37 pKa = 4.17EE38 pKa = 4.19SSSDD42 pKa = 3.5NPVVEE47 pKa = 4.68TYY49 pKa = 10.6GYY51 pKa = 10.83RR52 pKa = 11.84LDD54 pKa = 4.02ATDD57 pKa = 4.47EE58 pKa = 4.32EE59 pKa = 5.34YY60 pKa = 10.12ATYY63 pKa = 10.44SGYY66 pKa = 11.16ALQMDD71 pKa = 4.77STYY74 pKa = 11.28LAATYY79 pKa = 10.63TMTGAQKK86 pKa = 10.36FNYY89 pKa = 9.34GIPTNFSGTDD99 pKa = 3.39NQKK102 pKa = 10.9LDD104 pKa = 3.51FTSGVKK110 pKa = 10.45AFEE113 pKa = 4.38CDD115 pKa = 2.67ISYY118 pKa = 10.69IDD120 pKa = 4.52AAPTDD125 pKa = 4.23SIFGQICGVSEE136 pKa = 4.98FITNKK141 pKa = 10.03GVLFQIVVNNSNITVIIVIDD161 pKa = 3.58NAIVYY166 pKa = 8.09SQSLTSLDD174 pKa = 3.8EE175 pKa = 4.26APEE178 pKa = 4.5RR179 pKa = 11.84IGFEE183 pKa = 4.36LNANTGIVTIYY194 pKa = 9.88FDD196 pKa = 4.3NIIVPLSSNAYY207 pKa = 8.19TVMEE211 pKa = 4.13YY212 pKa = 10.84LGVLSIQEE220 pKa = 4.08GDD222 pKa = 3.44GNTNNTGKK230 pKa = 8.1EE231 pKa = 3.71TSMRR235 pKa = 11.84LVLDD239 pKa = 4.23GSDD242 pKa = 3.18MTNAYY247 pKa = 7.63DD248 pKa = 4.56TPTTDD253 pKa = 3.15PFGGPVANIVFF264 pKa = 4.14

Molecular weight: 28.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|T0RJ87|T0RJ87_9PROT 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacteriovorax sp. BSW11_IV OX=1353529 GN=fabF PE=3 SV=1
MM1 pKa = 7.21AAKK4 pKa = 8.8RR5 pKa = 11.84TWQPKK10 pKa = 7.59KK11 pKa = 9.93KK12 pKa = 9.89KK13 pKa = 9.33RR14 pKa = 11.84LRR16 pKa = 11.84VHH18 pKa = 6.74GFLKK22 pKa = 10.62RR23 pKa = 11.84MSTAGGKK30 pKa = 9.57KK31 pKa = 9.85VISARR36 pKa = 11.84RR37 pKa = 11.84AKK39 pKa = 10.05GRR41 pKa = 11.84HH42 pKa = 4.95SLTVKK47 pKa = 9.93TGTKK51 pKa = 9.97

Molecular weight: 5.77 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3457

0

3457

1125166

37

4321

325.5

36.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.375 ± 0.045

1.062 ± 0.015

5.68 ± 0.03

7.048 ± 0.059

5.24 ± 0.041

6.302 ± 0.054

1.944 ± 0.021

7.295 ± 0.037

8.11 ± 0.056

9.657 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.393 ± 0.021

5.413 ± 0.041

3.214 ± 0.026

3.086 ± 0.022

3.835 ± 0.026

7.297 ± 0.051

5.249 ± 0.053

6.308 ± 0.035

0.881 ± 0.013

3.611 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski