Porcine stool-associated circular virus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W8T0A7|W8T0A7_9CIRC Cap protein OS=Porcine stool-associated circular virus 5 OX=1475063 PE=4 SV=1
MM1 pKa = 7.83SSVRR5 pKa = 11.84LQNKK9 pKa = 9.18NLFLTYY15 pKa = 10.36NDD17 pKa = 3.9PEE19 pKa = 4.19EE20 pKa = 4.9TITGPAWLLNKK31 pKa = 10.0LAEE34 pKa = 4.23QLEE37 pKa = 4.83KK38 pKa = 10.02YY39 pKa = 8.97QPYY42 pKa = 10.49YY43 pKa = 10.31GVCGEE48 pKa = 4.56EE49 pKa = 4.09KK50 pKa = 10.87APTTGTKK57 pKa = 9.67HH58 pKa = 4.06YY59 pKa = 10.09HH60 pKa = 5.66LLIMCKK66 pKa = 10.25NPVISKK72 pKa = 9.11NGQVIEE78 pKa = 4.21IKK80 pKa = 10.74GIAPHH85 pKa = 6.66IEE87 pKa = 4.07KK88 pKa = 10.15IRR90 pKa = 11.84NNLRR94 pKa = 11.84GVIKK98 pKa = 10.24YY99 pKa = 9.02VKK101 pKa = 9.91KK102 pKa = 10.66DD103 pKa = 3.39GNIAEE108 pKa = 4.61LNKK111 pKa = 10.25NLCPVKK117 pKa = 10.35LDD119 pKa = 3.22KK120 pKa = 11.36LEE122 pKa = 4.45RR123 pKa = 11.84KK124 pKa = 9.25EE125 pKa = 4.62KK126 pKa = 10.59ADD128 pKa = 4.43LMLTGDD134 pKa = 4.24LEE136 pKa = 4.2KK137 pKa = 11.19AFIDD141 pKa = 3.97GTLGPIEE148 pKa = 4.36VIRR151 pKa = 11.84AEE153 pKa = 4.12KK154 pKa = 9.94LRR156 pKa = 11.84KK157 pKa = 9.13IFQVYY162 pKa = 9.66RR163 pKa = 11.84KK164 pKa = 9.41PEE166 pKa = 4.36PYY168 pKa = 9.81SKK170 pKa = 10.81KK171 pKa = 10.35LIMWYY176 pKa = 10.03RR177 pKa = 11.84GEE179 pKa = 4.09TGEE182 pKa = 4.3GKK184 pKa = 8.25TRR186 pKa = 11.84TAVEE190 pKa = 3.79LAEE193 pKa = 4.2EE194 pKa = 4.71FEE196 pKa = 4.13LSYY199 pKa = 10.49WITNEE204 pKa = 3.64SLRR207 pKa = 11.84WFDD210 pKa = 3.85GYY212 pKa = 11.34NGQEE216 pKa = 4.07LVIIDD221 pKa = 4.61DD222 pKa = 4.64FRR224 pKa = 11.84QKK226 pKa = 10.46MITDD230 pKa = 3.42WNFLLRR236 pKa = 11.84LLDD239 pKa = 4.3GYY241 pKa = 10.89GLSVPVKK248 pKa = 9.81GGYY251 pKa = 7.9VAWKK255 pKa = 8.61PKK257 pKa = 10.15IIIITTPATPQEE269 pKa = 4.04AFQWMNKK276 pKa = 10.08DD277 pKa = 3.78GEE279 pKa = 4.36LQNWDD284 pKa = 4.32HH285 pKa = 7.3LDD287 pKa = 3.28QLMRR291 pKa = 11.84RR292 pKa = 11.84LTHH295 pKa = 7.24DD296 pKa = 4.53DD297 pKa = 3.74EE298 pKa = 4.67EE299 pKa = 4.46QVYY302 pKa = 8.46QFPLWEE308 pKa = 4.12EE309 pKa = 4.29DD310 pKa = 3.27KK311 pKa = 11.09QKK313 pKa = 11.27LMNTVRR319 pKa = 11.84QFLGIEE325 pKa = 3.78NDD327 pKa = 3.17EE328 pKa = 4.33AMVEE332 pKa = 4.48EE333 pKa = 4.78EE334 pKa = 5.04LSMSPILPEE343 pKa = 3.62PTQIDD348 pKa = 3.83EE349 pKa = 4.25AA350 pKa = 5.31

Molecular weight: 40.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W8T0A7|W8T0A7_9CIRC Cap protein OS=Porcine stool-associated circular virus 5 OX=1475063 PE=4 SV=1
MM1 pKa = 7.66PKK3 pKa = 9.89RR4 pKa = 11.84YY5 pKa = 9.8ASRR8 pKa = 11.84KK9 pKa = 5.78RR10 pKa = 11.84TYY12 pKa = 9.69RR13 pKa = 11.84KK14 pKa = 9.43KK15 pKa = 10.03SRR17 pKa = 11.84KK18 pKa = 5.72ITRR21 pKa = 11.84FRR23 pKa = 11.84RR24 pKa = 11.84YY25 pKa = 8.68RR26 pKa = 11.84TGTRR30 pKa = 11.84AKK32 pKa = 9.35AKK34 pKa = 10.11SYY36 pKa = 10.48FRR38 pKa = 11.84LRR40 pKa = 11.84RR41 pKa = 11.84AAKK44 pKa = 9.98NYY46 pKa = 9.92SKK48 pKa = 10.73SRR50 pKa = 11.84KK51 pKa = 8.26IKK53 pKa = 9.43RR54 pKa = 11.84AKK56 pKa = 9.78RR57 pKa = 11.84QYY59 pKa = 10.92KK60 pKa = 7.73YY61 pKa = 9.22TAGKK65 pKa = 9.52GVKK68 pKa = 9.83NKK70 pKa = 9.79IKK72 pKa = 10.31RR73 pKa = 11.84LTMSEE78 pKa = 4.3FAQLPFYY85 pKa = 10.84DD86 pKa = 3.63IARR89 pKa = 11.84LSSMVMSGGNPNMYY103 pKa = 10.26PNIPDD108 pKa = 4.36NIRR111 pKa = 11.84SAYY114 pKa = 9.27KK115 pKa = 10.64GQFGPYY121 pKa = 6.78WSRR124 pKa = 11.84YY125 pKa = 7.41GAILPEE131 pKa = 4.44EE132 pKa = 4.42YY133 pKa = 10.51FNASSPYY140 pKa = 10.63IMGNANDD147 pKa = 4.04SYY149 pKa = 11.43TPYY152 pKa = 10.69LYY154 pKa = 10.76AFNPILSPVTCGSKK168 pKa = 8.47MQLYY172 pKa = 9.64AALYY176 pKa = 10.39KK177 pKa = 10.13KK178 pKa = 10.69FKK180 pKa = 10.4YY181 pKa = 10.55VGIKK185 pKa = 10.23VSWHH189 pKa = 6.36PLAKK193 pKa = 9.04PTTTVVSTSMTVNPGMHH210 pKa = 7.24DD211 pKa = 3.4EE212 pKa = 4.71TYY214 pKa = 10.02QAYY217 pKa = 10.72SIDD220 pKa = 3.51AGKK223 pKa = 10.63KK224 pKa = 8.66VDD226 pKa = 3.35SFMNSGTTQGLYY238 pKa = 10.41LKK240 pKa = 9.67HH241 pKa = 7.04NSMEE245 pKa = 4.29RR246 pKa = 11.84NVRR249 pKa = 11.84AKK251 pKa = 10.81DD252 pKa = 4.31FIPMSTQTLYY262 pKa = 9.1MHH264 pKa = 6.96VYY266 pKa = 9.62FGKK269 pKa = 10.48QIEE272 pKa = 4.7SSQNWHH278 pKa = 6.65LPFINKK284 pKa = 9.09VSEE287 pKa = 4.2TGGVTGYY294 pKa = 11.17AVAHH298 pKa = 6.95GINDD302 pKa = 3.57NQRR305 pKa = 11.84GRR307 pKa = 11.84LKK309 pKa = 10.56AAPFYY314 pKa = 10.4DD315 pKa = 3.81IKK317 pKa = 10.61TMMPCIEE324 pKa = 4.87RR325 pKa = 11.84DD326 pKa = 3.6SKK328 pKa = 10.51LHH330 pKa = 6.04KK331 pKa = 10.49VYY333 pKa = 11.14DD334 pKa = 3.55MSKK337 pKa = 8.64PFSFFVRR344 pKa = 11.84PMVSSNEE351 pKa = 3.85VSKK354 pKa = 10.86EE355 pKa = 3.46AGINVTQEE363 pKa = 3.65AGEE366 pKa = 4.83LLTQPTNEE374 pKa = 4.02IEE376 pKa = 4.05QLQKK380 pKa = 10.97GLKK383 pKa = 8.77HH384 pKa = 6.32LGYY387 pKa = 10.55KK388 pKa = 10.2EE389 pKa = 4.13FTHH392 pKa = 6.75SLTSNKK398 pKa = 9.84LDD400 pKa = 3.51IPQDD404 pKa = 3.43AYY406 pKa = 11.18SAQHH410 pKa = 6.1AHH412 pKa = 7.07DD413 pKa = 4.72PQDD416 pKa = 3.1KK417 pKa = 10.24FYY419 pKa = 10.78HH420 pKa = 5.92RR421 pKa = 11.84WSALSDD427 pKa = 3.46DD428 pKa = 5.38DD429 pKa = 5.66NFFNPVMFWYY439 pKa = 10.57CFTTSDD445 pKa = 4.33RR446 pKa = 11.84YY447 pKa = 9.63VPTYY451 pKa = 10.66AEE453 pKa = 3.96YY454 pKa = 9.66MKK456 pKa = 10.84INDD459 pKa = 3.48PHH461 pKa = 7.7QLFNTNRR468 pKa = 11.84FFTTTGEE475 pKa = 4.4SNNAKK480 pKa = 10.16YY481 pKa = 10.04EE482 pKa = 3.86LSARR486 pKa = 11.84IDD488 pKa = 3.35TSAPFLNGYY497 pKa = 10.22GYY499 pKa = 11.11FDD501 pKa = 3.18VTFYY505 pKa = 10.86TKK507 pKa = 9.77WKK509 pKa = 9.49EE510 pKa = 3.75EE511 pKa = 3.93RR512 pKa = 11.84PLVSKK517 pKa = 9.58TSYY520 pKa = 10.59VGIVPSEE527 pKa = 4.08TGVEE531 pKa = 4.47GVSSIIGNN539 pKa = 3.69

Molecular weight: 61.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

889

350

539

444.5

51.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.512 ± 0.728

0.675 ± 0.108

4.612 ± 0.485

6.524 ± 2.233

4.274 ± 0.841

6.074 ± 0.126

2.025 ± 0.354

5.737 ± 1.004

8.661 ± 0.116

7.424 ± 2.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.262 ± 0.24

5.512 ± 0.219

5.287 ± 0.085

3.825 ± 0.443

5.174 ± 0.528

6.299 ± 2.213

6.412 ± 0.584

4.949 ± 0.055

1.687 ± 0.525

6.074 ± 1.231
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski