Acidipropionibacterium jensenii

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Acidipropionibacterium

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2761 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3S4UP99|A0A3S4UP99_9ACTN Uncharacterized protein OS=Acidipropionibacterium jensenii OX=1749 GN=C0Z10_10050 PE=4 SV=1
MM1 pKa = 7.45AAVKK5 pKa = 9.13VTTVDD10 pKa = 3.31QLADD14 pKa = 3.59DD15 pKa = 4.46TPAEE19 pKa = 4.11FDD21 pKa = 3.97DD22 pKa = 5.34VEE24 pKa = 4.28GTDD27 pKa = 3.07IVLVRR32 pKa = 11.84TEE34 pKa = 4.2GQTFAIGALCSHH46 pKa = 7.06AEE48 pKa = 3.89VPMVDD53 pKa = 5.47GEE55 pKa = 4.64VEE57 pKa = 4.14DD58 pKa = 5.03CALEE62 pKa = 4.51CYY64 pKa = 8.88MHH66 pKa = 7.24GSMFDD71 pKa = 3.56LRR73 pKa = 11.84TGAPLSLPATEE84 pKa = 5.67PIPVFPVTIDD94 pKa = 3.55GDD96 pKa = 4.1DD97 pKa = 3.64VLVDD101 pKa = 3.61VAHH104 pKa = 7.17PIPYY108 pKa = 9.63KK109 pKa = 10.59EE110 pKa = 4.1SS111 pKa = 3.16

Molecular weight: 11.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3Q9UNT0|A0A3Q9UNT0_9ACTN DUF488 domain-containing protein OS=Acidipropionibacterium jensenii OX=1749 GN=C0Z11_03710 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.99KK16 pKa = 9.77HH17 pKa = 5.81RR18 pKa = 11.84KK19 pKa = 8.55LLKK22 pKa = 8.44KK23 pKa = 9.1TRR25 pKa = 11.84IQRR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84AGKK33 pKa = 9.79

Molecular weight: 4.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2761

0

2761

920567

30

2249

333.4

35.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.038 ± 0.057

0.911 ± 0.012

6.211 ± 0.041

5.114 ± 0.039

2.708 ± 0.027

9.006 ± 0.037

2.343 ± 0.021

4.451 ± 0.035

2.215 ± 0.039

9.795 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.219 ± 0.022

2.002 ± 0.021

5.54 ± 0.039

3.216 ± 0.026

7.567 ± 0.04

6.272 ± 0.042

6.229 ± 0.036

8.684 ± 0.044

1.615 ± 0.021

1.865 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski