Legionella adelaidensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2194 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0W0R498|A0A0W0R498_9GAMM Uncharacterized protein OS=Legionella adelaidensis OX=45056 GN=Lade_0521 PE=4 SV=1
MM1 pKa = 7.6IRR3 pKa = 11.84ILTLLFITTLSFTANADD20 pKa = 3.78DD21 pKa = 4.98ALSSTDD27 pKa = 3.54TQDD30 pKa = 3.53QQNDD34 pKa = 3.26QQTCYY39 pKa = 7.61QQRR42 pKa = 11.84ISDD45 pKa = 4.35CMNKK49 pKa = 9.79CASSDD54 pKa = 3.5ASDD57 pKa = 3.95DD58 pKa = 4.08CEE60 pKa = 4.45SLCEE64 pKa = 3.94EE65 pKa = 4.54NSRR68 pKa = 11.84NEE70 pKa = 4.12CKK72 pKa = 10.44DD73 pKa = 3.01AGEE76 pKa = 4.03

Molecular weight: 8.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0W0R554|A0A0W0R554_9GAMM Transmembrane permease OS=Legionella adelaidensis OX=45056 GN=ydiK PE=3 SV=1
MM1 pKa = 6.58NTRR4 pKa = 11.84MQVAMQQEE12 pKa = 5.24VYY14 pKa = 10.91AQIKK18 pKa = 9.87DD19 pKa = 3.21GRR21 pKa = 11.84LRR23 pKa = 11.84PRR25 pKa = 11.84KK26 pKa = 9.32CWLCKK31 pKa = 10.13SGEE34 pKa = 4.22EE35 pKa = 3.88IAAILPEE42 pKa = 3.86RR43 pKa = 11.84AAIKK47 pKa = 10.08RR48 pKa = 11.84SYY50 pKa = 8.74PAIMRR55 pKa = 11.84AALNVLANARR65 pKa = 11.84DD66 pKa = 3.89RR67 pKa = 11.84RR68 pKa = 11.84FSPYY72 pKa = 10.64LVGG75 pKa = 4.83

Molecular weight: 8.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2194

0

2194

718026

51

3010

327.3

36.74

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.755 ± 0.057

1.13 ± 0.021

4.522 ± 0.035

6.41 ± 0.055

4.658 ± 0.039

6.113 ± 0.06

2.354 ± 0.026

7.535 ± 0.04

6.437 ± 0.043

10.937 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.262 ± 0.024

4.789 ± 0.034

4.272 ± 0.034

4.379 ± 0.038

4.319 ± 0.035

6.343 ± 0.04

5.254 ± 0.033

6.074 ± 0.044

1.117 ± 0.019

3.334 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski