Paraeggerthella hongkongensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Paraeggerthella

Average proteome isoelectric point is 5.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2391 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A369LCR0|A0A369LCR0_9ACTN Uncharacterized protein OS=Paraeggerthella hongkongensis OX=230658 GN=C1879_08450 PE=4 SV=1
MM1 pKa = 7.48AATVKK6 pKa = 9.88TLLEE10 pKa = 4.14HH11 pKa = 6.97HH12 pKa = 6.94GEE14 pKa = 4.4LYY16 pKa = 10.12WGTRR20 pKa = 11.84QANPGYY26 pKa = 10.35HH27 pKa = 6.35YY28 pKa = 10.98GLSLDD33 pKa = 3.27IGEE36 pKa = 4.91NGVAAQVVYY45 pKa = 11.23VMSDD49 pKa = 2.83LDD51 pKa = 4.13EE52 pKa = 4.76NDD54 pKa = 3.74NPVVTPEE61 pKa = 4.33MLMSCYY67 pKa = 9.42TVADD71 pKa = 4.43LEE73 pKa = 4.68ANGIVPSDD81 pKa = 4.33LMDD84 pKa = 4.17EE85 pKa = 4.36EE86 pKa = 6.48DD87 pKa = 3.65NDD89 pKa = 4.58SVKK92 pKa = 10.37GWYY95 pKa = 9.95CIEE98 pKa = 3.85EE99 pKa = 4.3SFFPEE104 pKa = 4.01NQVEE108 pKa = 4.63ALQEE112 pKa = 4.29SNAQLDD118 pKa = 4.37GYY120 pKa = 10.84LDD122 pKa = 3.43IVLDD126 pKa = 3.59IMLISPEE133 pKa = 3.88EE134 pKa = 4.05VAAGMPSLDD143 pKa = 4.78DD144 pKa = 3.5ISFFDD149 pKa = 5.06LLSEE153 pKa = 4.31LEE155 pKa = 4.84GIAEE159 pKa = 4.78RR160 pKa = 11.84IDD162 pKa = 3.43SGALAKK168 pKa = 9.83PLPFGFRR175 pKa = 11.84LVGDD179 pKa = 4.34ALFGWEE185 pKa = 4.64FADD188 pKa = 4.53EE189 pKa = 4.2EE190 pKa = 4.4DD191 pKa = 3.51WRR193 pKa = 5.44

Molecular weight: 21.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A369L4U7|A0A369L4U7_9ACTN FHA domain-containing protein OS=Paraeggerthella hongkongensis OX=230658 GN=C1879_11905 PE=4 SV=1
MM1 pKa = 7.62RR2 pKa = 11.84AARR5 pKa = 11.84CASRR9 pKa = 11.84RR10 pKa = 11.84NARR13 pKa = 11.84RR14 pKa = 11.84ANALLLALGILLIASALASLMLGRR38 pKa = 11.84YY39 pKa = 8.03PITPVEE45 pKa = 4.08AVGMLANLAFPVDD58 pKa = 4.35PFWTPQQEE66 pKa = 4.42TLFFQVRR73 pKa = 11.84LPRR76 pKa = 11.84IVLAVMVGCSLATAGAAYY94 pKa = 10.13QGTFQNPLVSPDD106 pKa = 3.37ILGASQGAAFGAACAILLGMGAFGVSASAFLFSIAAVMLVLLIGTRR152 pKa = 11.84ARR154 pKa = 11.84GNHH157 pKa = 5.8LLIVVLAGVMVSSLFSAGVSFTKK180 pKa = 10.9LIADD184 pKa = 4.55PNNQLAAITYY194 pKa = 8.41WLMGSLTGAKK204 pKa = 9.05WSDD207 pKa = 3.22MALAAIPMAVGLGALFALRR226 pKa = 11.84WRR228 pKa = 11.84INVLTMGDD236 pKa = 4.25DD237 pKa = 3.74EE238 pKa = 5.72ASTMGVNARR247 pKa = 11.84RR248 pKa = 11.84TRR250 pKa = 11.84LIVILAATLITASSVAVSGMIGWVGLVIPHH280 pKa = 7.26LSRR283 pKa = 11.84MVIGCDD289 pKa = 3.48YY290 pKa = 11.05RR291 pKa = 11.84KK292 pKa = 10.11LLPASMLMGASFMLIVDD309 pKa = 4.85DD310 pKa = 4.32IARR313 pKa = 11.84LVATAEE319 pKa = 3.94IPIGILTAFVGAPFFLYY336 pKa = 10.89LITRR340 pKa = 11.84KK341 pKa = 9.39KK342 pKa = 10.44QKK344 pKa = 10.45LL345 pKa = 3.45

Molecular weight: 36.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2391

0

2391

817088

37

2536

341.7

37.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.976 ± 0.07

1.593 ± 0.023

6.083 ± 0.039

6.303 ± 0.047

3.923 ± 0.035

8.18 ± 0.052

1.73 ± 0.018

4.811 ± 0.048

3.806 ± 0.041

9.381 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.671 ± 0.026

2.84 ± 0.028

4.309 ± 0.029

2.955 ± 0.026

6.02 ± 0.056

6.096 ± 0.045

5.061 ± 0.032

8.355 ± 0.047

1.08 ± 0.021

2.827 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski