Human mastadenovirus C

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 27 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3Q9HL43|A0A3Q9HL43_9ADEN 33K OS=Human mastadenovirus C OX=129951 PE=3 SV=1
MM1 pKa = 7.5RR2 pKa = 11.84HH3 pKa = 6.51IICHH7 pKa = 5.93GGVITEE13 pKa = 4.22EE14 pKa = 4.15MAASLLDD21 pKa = 3.6QLIEE25 pKa = 4.19EE26 pKa = 4.48VLADD30 pKa = 3.85NLPPPSHH37 pKa = 7.16FEE39 pKa = 3.8PPTLHH44 pKa = 6.78EE45 pKa = 5.5LYY47 pKa = 10.58DD48 pKa = 4.45LDD50 pKa = 3.62VTAPEE55 pKa = 4.89DD56 pKa = 3.83PNEE59 pKa = 4.13EE60 pKa = 3.85AVSQIFPEE68 pKa = 4.34SVMLAVQEE76 pKa = 4.97GIDD79 pKa = 4.38LFTFPPAPGSPEE91 pKa = 3.95PPHH94 pKa = 7.1LSRR97 pKa = 11.84QPEE100 pKa = 4.1QPEE103 pKa = 3.86QRR105 pKa = 11.84ALGPVSMPNLVPEE118 pKa = 4.78VIDD121 pKa = 3.89LTCHH125 pKa = 5.71EE126 pKa = 5.16AGFPPSDD133 pKa = 4.22DD134 pKa = 3.37EE135 pKa = 5.17DD136 pKa = 4.38EE137 pKa = 4.52EE138 pKa = 5.43GEE140 pKa = 4.43EE141 pKa = 4.08FVLDD145 pKa = 4.04YY146 pKa = 11.29VEE148 pKa = 5.48HH149 pKa = 7.23PGHH152 pKa = 6.6GCRR155 pKa = 11.84SCHH158 pKa = 4.33YY159 pKa = 9.82HH160 pKa = 6.49RR161 pKa = 11.84RR162 pKa = 11.84NTGDD166 pKa = 3.82PDD168 pKa = 3.74IMCSLCYY175 pKa = 9.84MRR177 pKa = 11.84TCGMFVYY184 pKa = 10.41SPVSEE189 pKa = 4.7PEE191 pKa = 4.08PEE193 pKa = 4.37PEE195 pKa = 4.57PEE197 pKa = 4.28PEE199 pKa = 3.77PARR202 pKa = 11.84PARR205 pKa = 11.84RR206 pKa = 11.84PKK208 pKa = 9.45MVPAILRR215 pKa = 11.84RR216 pKa = 11.84PTSPVSRR223 pKa = 11.84EE224 pKa = 4.32CNSSTDD230 pKa = 3.44SCDD233 pKa = 3.3SGPSNTPPEE242 pKa = 4.07IHH244 pKa = 6.71PVVPLCPIKK253 pKa = 10.4PVAVRR258 pKa = 11.84VGGRR262 pKa = 11.84RR263 pKa = 11.84RR264 pKa = 11.84AVEE267 pKa = 4.43CIEE270 pKa = 5.02DD271 pKa = 4.03LLNEE275 pKa = 4.64PGQPLDD281 pKa = 4.25LSCKK285 pKa = 10.03RR286 pKa = 11.84PRR288 pKa = 11.84PP289 pKa = 3.69

Molecular weight: 31.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E1ARR7|E1ARR7_9ADEN Isoform of A0A3Q9HL75 Pre-hexon-linking protein VIII OS=Human mastadenovirus C OX=129951 GN=L4 PE=2 SV=1
MM1 pKa = 7.77ALTCRR6 pKa = 11.84LRR8 pKa = 11.84FPVPGFRR15 pKa = 11.84GRR17 pKa = 11.84MHH19 pKa = 7.55RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GMAGHH27 pKa = 7.2GLTGGMRR34 pKa = 11.84RR35 pKa = 11.84AHH37 pKa = 5.79HH38 pKa = 5.82RR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84ASHH45 pKa = 5.58RR46 pKa = 11.84RR47 pKa = 11.84MRR49 pKa = 11.84GGILPLLIPLIAAAIGAVPGIASVALQAQRR79 pKa = 11.84HH80 pKa = 4.41

Molecular weight: 8.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

11

27

7412

61

807

274.5

30.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.338 ± 0.448

2.024 ± 0.403

4.79 ± 0.291

6.827 ± 0.473

3.319 ± 0.222

6.152 ± 0.307

2.59 ± 0.234

3.791 ± 0.281

3.386 ± 0.368

9.458 ± 0.47

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.604 ± 0.231

3.859 ± 0.378

7.366 ± 0.486

4.439 ± 0.327

8.5 ± 0.531

6.935 ± 0.372

5.491 ± 0.428

6.462 ± 0.32

1.079 ± 0.133

2.59 ± 0.226
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski