Swinepox virus (strain Swine/Nebraska/17077-99/1999) (SWPV)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Suipoxvirus; Swinepox virus

Average proteome isoelectric point is 6.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 146 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q77G93|Q77G93_SWPV1 Serine/threonine-protein kinase OS=Swinepox virus (strain Swine/Nebraska/17077-99/1999) OX=300880 GN=SPV022 PE=3 SV=1
MM1 pKa = 7.81GITHH5 pKa = 6.93EE6 pKa = 4.48LDD8 pKa = 2.7IFLVSEE14 pKa = 5.07DD15 pKa = 2.99IAMKK19 pKa = 10.3HH20 pKa = 5.38VEE22 pKa = 3.95LHH24 pKa = 6.2KK25 pKa = 10.89GNSYY29 pKa = 11.31GCVLNIKK36 pKa = 9.7SSCRR40 pKa = 11.84KK41 pKa = 7.17QMKK44 pKa = 9.88IIFVLKK50 pKa = 10.21PDD52 pKa = 3.05WTEE55 pKa = 3.41IDD57 pKa = 3.92SIKK60 pKa = 9.57PIQMEE65 pKa = 3.9ADD67 pKa = 4.57GIYY70 pKa = 9.96IDD72 pKa = 3.7VTIIKK77 pKa = 10.04QSFYY81 pKa = 11.31EE82 pKa = 4.58VIYY85 pKa = 10.45CSNFTIYY92 pKa = 10.64GDD94 pKa = 3.69SVINIFSDD102 pKa = 3.05IDD104 pKa = 3.3RR105 pKa = 11.84CTKK108 pKa = 9.85EE109 pKa = 4.23KK110 pKa = 11.17YY111 pKa = 10.11PIININIDD119 pKa = 3.17KK120 pKa = 10.35KK121 pKa = 10.26KK122 pKa = 10.82YY123 pKa = 9.28EE124 pKa = 4.49IIEE127 pKa = 4.0SGYY130 pKa = 8.58TYY132 pKa = 10.3IYY134 pKa = 9.52IQSPIDD140 pKa = 3.66KK141 pKa = 9.14EE142 pKa = 4.7DD143 pKa = 3.22KK144 pKa = 9.12LTYY147 pKa = 9.96MRR149 pKa = 11.84DD150 pKa = 3.75DD151 pKa = 4.06YY152 pKa = 11.81VDD154 pKa = 4.25EE155 pKa = 4.74YY156 pKa = 11.68NSSDD160 pKa = 4.22DD161 pKa = 4.69DD162 pKa = 4.79CIDD165 pKa = 4.87YY166 pKa = 11.05YY167 pKa = 11.6DD168 pKa = 5.3CDD170 pKa = 5.26YY171 pKa = 11.91DD172 pKa = 6.32DD173 pKa = 6.21DD174 pKa = 5.46DD175 pKa = 6.08NNDD178 pKa = 3.87AEE180 pKa = 5.63DD181 pKa = 4.02EE182 pKa = 4.26DD183 pKa = 4.79EE184 pKa = 4.21EE185 pKa = 4.53

Molecular weight: 21.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8V3Q3|Q8V3Q3_SWPV1 SPV041 putative DNA-binding phosphoprotein OS=Swinepox virus (strain Swine/Nebraska/17077-99/1999) OX=300880 GN=SPV041 PE=4 SV=1
MM1 pKa = 7.63TINTKK6 pKa = 11.11DD7 pKa = 3.35MFSLVSLTLLTIFMLACGGSLLFKK31 pKa = 10.26TIAPHH36 pKa = 6.13RR37 pKa = 11.84LVITRR42 pKa = 11.84SVTFNKK48 pKa = 9.46VVNFLEE54 pKa = 4.37YY55 pKa = 10.34VAILIFIPGTITLYY69 pKa = 9.95SAYY72 pKa = 10.41VRR74 pKa = 11.84TLFRR78 pKa = 5.87

Molecular weight: 8.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

146

0

146

46268

53

1959

316.9

36.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.565 ± 0.113

2.129 ± 0.112

6.49 ± 0.129

4.932 ± 0.105

4.919 ± 0.142

3.536 ± 0.133

2.051 ± 0.062

12.052 ± 0.22

8.17 ± 0.157

8.667 ± 0.169

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.516 ± 0.08

7.884 ± 0.156

2.857 ± 0.112

2.053 ± 0.079

3.776 ± 0.118

7.962 ± 0.158

5.762 ± 0.174

5.209 ± 0.114

0.676 ± 0.049

5.792 ± 0.117
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski