Human adenovirus F serotype 41 (HAdV-41) (Human adenovirus 41)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Human mastadenovirus F

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 34 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G8WC22|A0A3G8WC22_ADE41 Protein 33K OS=Human adenovirus F serotype 41 OX=10524 PE=3 SV=1
MM1 pKa = 7.82RR2 pKa = 11.84MLPDD6 pKa = 4.24FFTGNWDD13 pKa = 4.4DD14 pKa = 3.84MFQGLLEE21 pKa = 4.54AEE23 pKa = 4.64HH24 pKa = 6.95PFDD27 pKa = 5.43FPEE30 pKa = 4.65PSQAFEE36 pKa = 4.59EE37 pKa = 4.55ISLHH41 pKa = 5.82NLFDD45 pKa = 3.88VEE47 pKa = 4.58LDD49 pKa = 3.61QSEE52 pKa = 4.28GDD54 pKa = 3.87PNEE57 pKa = 4.0EE58 pKa = 4.22AVDD61 pKa = 3.8GMFPNWMLSEE71 pKa = 4.17DD72 pKa = 3.6HH73 pKa = 6.83SADD76 pKa = 3.2SGAASGDD83 pKa = 3.7SGVGEE88 pKa = 4.64DD89 pKa = 4.06LVEE92 pKa = 4.2VNLDD96 pKa = 3.89LKK98 pKa = 10.84CYY100 pKa = 10.54EE101 pKa = 4.51EE102 pKa = 4.61GLPPSGSEE110 pKa = 3.46ADD112 pKa = 3.68EE113 pKa = 4.48AEE115 pKa = 4.04EE116 pKa = 3.75RR117 pKa = 11.84AEE119 pKa = 4.08EE120 pKa = 4.31EE121 pKa = 3.89EE122 pKa = 4.53TAVSNYY128 pKa = 9.45VNIAEE133 pKa = 4.64GASQLVLDD141 pKa = 4.83CPEE144 pKa = 4.02NPGRR148 pKa = 11.84GCRR151 pKa = 11.84ACDD154 pKa = 3.49FHH156 pKa = 8.58RR157 pKa = 11.84GSSGNPEE164 pKa = 4.02AMCALCYY171 pKa = 9.74MRR173 pKa = 11.84LTGHH177 pKa = 7.36CIYY180 pKa = 11.01SPISDD185 pKa = 4.11AEE187 pKa = 4.65GEE189 pKa = 4.54CEE191 pKa = 4.16LGSNEE196 pKa = 4.15EE197 pKa = 4.33TEE199 pKa = 4.82LPCSLTATAPVRR211 pKa = 11.84PTPCRR216 pKa = 11.84VSCRR220 pKa = 11.84RR221 pKa = 11.84RR222 pKa = 11.84PAVDD226 pKa = 4.25CIEE229 pKa = 4.89DD230 pKa = 4.01LLEE233 pKa = 4.6EE234 pKa = 5.07DD235 pKa = 4.52PTDD238 pKa = 3.6EE239 pKa = 4.98PLNLSLKK246 pKa = 10.08RR247 pKa = 11.84PKK249 pKa = 10.63SSS251 pKa = 2.91

Molecular weight: 27.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B5SNU1|B5SNU1_ADE41 Control protein E4orf2 OS=Human adenovirus F serotype 41 OX=10524 PE=4 SV=1
MM1 pKa = 7.75ALTCRR6 pKa = 11.84FRR8 pKa = 11.84IPVSSYY14 pKa = 9.26RR15 pKa = 11.84GRR17 pKa = 11.84SRR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84GMLGSGRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84ALRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84MKK38 pKa = 10.76GGFLPALIPIIAAAIGAIPGIASVALQARR67 pKa = 11.84KK68 pKa = 7.68QQ69 pKa = 3.39

Molecular weight: 7.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

29

5

34

11321

69

1187

333.0

37.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.605 ± 0.37

1.811 ± 0.283

4.549 ± 0.258

6.245 ± 0.518

3.931 ± 0.215

5.927 ± 0.239

1.97 ± 0.208

4.046 ± 0.206

3.887 ± 0.346

10.061 ± 0.467

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.394 ± 0.179

5.035 ± 0.437

6.607 ± 0.233

4.761 ± 0.278

7.075 ± 0.574

7.084 ± 0.322

5.971 ± 0.34

6.263 ± 0.246

1.378 ± 0.111

3.401 ± 0.287
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski