Acetivibrio ethanolgignens

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia;

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3375 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0V8QIE0|A0A0V8QIE0_9FIRM Chloride channel protein OS=Acetivibrio ethanolgignens OX=290052 GN=ASU35_16885 PE=4 SV=1
MM1 pKa = 7.32NKK3 pKa = 10.07AVIYY7 pKa = 10.52ISGTMNEE14 pKa = 4.56TVDD17 pKa = 3.52NMVVRR22 pKa = 11.84VIEE25 pKa = 4.58RR26 pKa = 11.84YY27 pKa = 9.22CEE29 pKa = 3.63KK30 pKa = 10.41HH31 pKa = 6.07GYY33 pKa = 9.25EE34 pKa = 3.74IAALLGEE41 pKa = 4.63SSQSGMSMPMKK52 pKa = 10.46YY53 pKa = 10.44SFIGMAEE60 pKa = 3.94VEE62 pKa = 4.88DD63 pKa = 4.08IDD65 pKa = 4.35TVVTLSSAMVGTTDD79 pKa = 4.22DD80 pKa = 4.89EE81 pKa = 4.49IMEE84 pKa = 4.81TIDD87 pKa = 4.52LLAHH91 pKa = 5.72YY92 pKa = 9.19GITVEE97 pKa = 4.2TAKK100 pKa = 10.91EE101 pKa = 3.91DD102 pKa = 3.25MSAYY106 pKa = 10.38YY107 pKa = 10.17DD108 pKa = 3.55ALGSDD113 pKa = 5.44GYY115 pKa = 10.76CGCDD119 pKa = 3.73DD120 pKa = 4.83SSMDD124 pKa = 3.26DD125 pKa = 3.38TQIIKK130 pKa = 10.43EE131 pKa = 4.06LDD133 pKa = 3.05KK134 pKa = 10.95LIRR137 pKa = 11.84MVSGRR142 pKa = 11.84QQDD145 pKa = 3.07

Molecular weight: 16.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0V8QEF9|A0A0V8QEF9_9FIRM Adenine phosphoribosyltransferase OS=Acetivibrio ethanolgignens OX=290052 GN=apt PE=3 SV=1
MM1 pKa = 7.67KK2 pKa = 8.72MTFQPKK8 pKa = 9.06KK9 pKa = 8.03RR10 pKa = 11.84SRR12 pKa = 11.84SKK14 pKa = 9.44VHH16 pKa = 6.17GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTKK25 pKa = 10.19NGRR28 pKa = 11.84KK29 pKa = 8.98VLAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.71GRR39 pKa = 11.84KK40 pKa = 8.73VLSAA44 pKa = 4.05

Molecular weight: 5.06 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3375

0

3375

1009164

37

2290

299.0

33.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.124 ± 0.047

1.449 ± 0.017

5.335 ± 0.037

8.265 ± 0.052

4.116 ± 0.033

6.814 ± 0.041

1.597 ± 0.017

7.547 ± 0.037

7.555 ± 0.035

9.232 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.911 ± 0.024

4.466 ± 0.033

3.075 ± 0.022

3.136 ± 0.023

4.457 ± 0.035

5.808 ± 0.039

5.338 ± 0.052

6.68 ± 0.036

0.887 ± 0.012

4.207 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski