Mikumi yellow baboon virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Simarterivirinae; Thetaarterivirus; Mitartevirus; Thetaarterivirus mikelba 1

Average proteome isoelectric point is 7.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A089G1Z7|A0A089G1Z7_9NIDO GP4 protein OS=Mikumi yellow baboon virus 1 OX=1546177 GN=ORF4 PE=4 SV=1
MM1 pKa = 7.68APLIHH6 pKa = 6.72GRR8 pKa = 11.84FISCFCVLYY17 pKa = 8.1FVCSCCANNNTTGTTPTGVCFLLPMKK43 pKa = 10.68HH44 pKa = 6.49NITINITLSTLFCTNDD60 pKa = 3.05GKK62 pKa = 11.34VEE64 pKa = 3.96MEE66 pKa = 3.32VDD68 pKa = 3.62EE69 pKa = 4.56NHH71 pKa = 6.83FGDD74 pKa = 5.34DD75 pKa = 3.82EE76 pKa = 5.03CPLSGFKK83 pKa = 10.3PHH85 pKa = 6.91GSTKK89 pKa = 10.3GKK91 pKa = 8.87YY92 pKa = 10.08GSFIHH97 pKa = 6.97HH98 pKa = 7.51LDD100 pKa = 3.06QSFPLNLSSNPSHH113 pKa = 7.47VYY115 pKa = 8.41ITILLTYY122 pKa = 9.94IVAQYY127 pKa = 10.71PSVLFDD133 pKa = 3.02NTTNRR138 pKa = 11.84VYY140 pKa = 10.82AINATEE146 pKa = 3.97TAGEE150 pKa = 3.85WRR152 pKa = 11.84FCVNATDD159 pKa = 5.25LAALNQTLPIVDD171 pKa = 5.67LYY173 pKa = 9.01TTGPPWDD180 pKa = 3.87LYY182 pKa = 10.51YY183 pKa = 10.95VEE185 pKa = 5.02LLRR188 pKa = 11.84PFLLSLLMLGLSRR201 pKa = 11.84II202 pKa = 4.1

Molecular weight: 22.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A089G0E4|A0A089G0E4_9NIDO ORF2a' protein OS=Mikumi yellow baboon virus 1 OX=1546177 GN=ORF2a' PE=4 SV=1
MM1 pKa = 7.3VSAICADD8 pKa = 3.63PGYY11 pKa = 6.9TTLAFTAAPVFIACLRR27 pKa = 11.84LFTPNIRR34 pKa = 11.84GLACLIIVSTLAYY47 pKa = 10.04AATKK51 pKa = 9.83FAEE54 pKa = 4.46HH55 pKa = 6.46SLATVVTIAFSLLYY69 pKa = 10.5CSFKK73 pKa = 10.48FVQWLIIRR81 pKa = 11.84IRR83 pKa = 11.84MCRR86 pKa = 11.84LGRR89 pKa = 11.84QYY91 pKa = 10.59IISPASHH98 pKa = 6.46VEE100 pKa = 4.1TSFGRR105 pKa = 11.84YY106 pKa = 8.71SLPSTGSSAVVTRR119 pKa = 11.84RR120 pKa = 11.84SGMTLVNNQLIPDD133 pKa = 3.91VKK135 pKa = 10.8KK136 pKa = 10.72LVLAGKK142 pKa = 9.7IATKK146 pKa = 10.29KK147 pKa = 10.72GLINLRR153 pKa = 11.84KK154 pKa = 10.2YY155 pKa = 10.28GWQKK159 pKa = 9.55TKK161 pKa = 11.02

Molecular weight: 17.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13

0

13

7301

47

3539

561.6

61.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.903 ± 0.455

3.205 ± 0.235

4.383 ± 0.575

3.383 ± 0.339

4.534 ± 0.416

6.876 ± 0.751

3.013 ± 0.473

5.013 ± 0.388

4.109 ± 0.382

10.273 ± 0.774

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.548 ± 0.176

3.123 ± 0.527

6.41 ± 0.595

3.095 ± 0.157

4.684 ± 0.285

7.478 ± 0.4

7.246 ± 0.507

7.67 ± 0.293

1.082 ± 0.161

3.972 ± 0.138
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski