Glutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / NCIMB 14258 / Re117) (Arthrobacter arilaitensis)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Glutamicibacter; Glutamicibacter arilaitensis

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3380 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E1VT29|E1VT29_GLUAR ESAT-6-like protein OS=Glutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / NCIMB 14258 / Re117) OX=861360 GN=AARI_05540 PE=3 SV=1
MM1 pKa = 7.01MRR3 pKa = 11.84LAAVGTALAMGLAGCSSSTADD24 pKa = 4.01SQPEE28 pKa = 4.13DD29 pKa = 3.72AQSSQPAAKK38 pKa = 10.16SSAPEE43 pKa = 4.06GLEE46 pKa = 3.72SFYY49 pKa = 10.68TQEE52 pKa = 5.27LDD54 pKa = 3.07WEE56 pKa = 4.55MCGSIIEE63 pKa = 4.41CATIKK68 pKa = 10.88VPMDD72 pKa = 3.34YY73 pKa = 11.1ANPEE77 pKa = 4.02GQSIDD82 pKa = 3.31LALNRR87 pKa = 11.84RR88 pKa = 11.84AVDD91 pKa = 3.47GATGNILVNPGGPGGSGLDD110 pKa = 3.54MVSSTVPSMFSNDD123 pKa = 2.87LQRR126 pKa = 11.84AYY128 pKa = 11.01NVIGFDD134 pKa = 3.42PRR136 pKa = 11.84GVGEE140 pKa = 4.41SSPVTCQSAAEE151 pKa = 4.12TDD153 pKa = 3.09KK154 pKa = 11.33GRR156 pKa = 11.84QEE158 pKa = 4.1NLRR161 pKa = 11.84AWVPEE166 pKa = 3.99DD167 pKa = 2.97QHH169 pKa = 7.57EE170 pKa = 4.64IIEE173 pKa = 4.4STEE176 pKa = 4.36DD177 pKa = 3.49YY178 pKa = 11.29AADD181 pKa = 3.76CASNTGEE188 pKa = 4.77LLDD191 pKa = 4.89HH192 pKa = 6.93VDD194 pKa = 3.58TVSAARR200 pKa = 11.84DD201 pKa = 3.38MDD203 pKa = 4.24VIRR206 pKa = 11.84AVLGDD211 pKa = 3.7AQLDD215 pKa = 4.06YY216 pKa = 11.55LGVSYY221 pKa = 8.33GTFLGATYY229 pKa = 11.29ADD231 pKa = 5.03LFPQNVGRR239 pKa = 11.84FVLDD243 pKa = 3.54GAMDD247 pKa = 4.71PSLPAAEE254 pKa = 4.27VTLAQAVGFEE264 pKa = 4.43KK265 pKa = 10.4EE266 pKa = 3.6TDD268 pKa = 2.89AWLASCLEE276 pKa = 4.16SDD278 pKa = 3.9ACPFTGTVEE287 pKa = 3.98EE288 pKa = 5.1AKK290 pKa = 10.79VQLQQFFAQVEE301 pKa = 4.37NEE303 pKa = 4.16PMTASDD309 pKa = 3.67GRR311 pKa = 11.84VVPIIDD317 pKa = 3.9FVNGFVLPLYY327 pKa = 10.59DD328 pKa = 4.49DD329 pKa = 4.81SSWSYY334 pKa = 10.02LTDD337 pKa = 3.36AMNAAINDD345 pKa = 3.82ADD347 pKa = 3.39VDD349 pKa = 4.36MILGFADD356 pKa = 4.72LSADD360 pKa = 3.92RR361 pKa = 11.84QSDD364 pKa = 3.44GTYY367 pKa = 10.83ASNSSDD373 pKa = 3.02AFTAINCLDD382 pKa = 3.6RR383 pKa = 11.84PMDD386 pKa = 3.85SSAEE390 pKa = 4.13TMQDD394 pKa = 2.8EE395 pKa = 4.68ATEE398 pKa = 4.18LMRR401 pKa = 11.84MAPTLGKK408 pKa = 9.68YY409 pKa = 9.21LAYY412 pKa = 10.48GSITCEE418 pKa = 3.25AWDD421 pKa = 4.0YY422 pKa = 11.67DD423 pKa = 4.0STGTPEE429 pKa = 4.46ILDD432 pKa = 3.69APGSNEE438 pKa = 3.39ILVIGTVGDD447 pKa = 3.48PATPYY452 pKa = 10.11KK453 pKa = 10.18WSEE456 pKa = 3.91ALAKK460 pKa = 10.55QLDD463 pKa = 3.86NATLLTYY470 pKa = 10.08EE471 pKa = 4.37GHH473 pKa = 6.0GHH475 pKa = 4.9TAYY478 pKa = 10.32GRR480 pKa = 11.84SNEE483 pKa = 4.64CITKK487 pKa = 10.54AVDD490 pKa = 3.29EE491 pKa = 4.2YY492 pKa = 11.39LIDD495 pKa = 4.11GKK497 pKa = 11.08VPEE500 pKa = 5.1AGTRR504 pKa = 11.84CC505 pKa = 3.49

Molecular weight: 53.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E1VRE3|E1VRE3_GLUAR Uncharacterized protein OS=Glutamicibacter arilaitensis (strain DSM 16368 / CIP 108037 / IAM 15318 / JCM 13566 / NCIMB 14258 / Re117) OX=861360 GN=AARI_pI00410 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84SKK15 pKa = 10.39KK16 pKa = 9.03HH17 pKa = 4.36GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILSARR35 pKa = 11.84RR36 pKa = 11.84GKK38 pKa = 9.94NRR40 pKa = 11.84AEE42 pKa = 3.99LSAA45 pKa = 5.01

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3380

0

3380

1062228

30

2173

314.3

34.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.065 ± 0.063

0.659 ± 0.011

5.42 ± 0.037

6.274 ± 0.041

3.317 ± 0.028

8.174 ± 0.036

2.175 ± 0.02

5.091 ± 0.029

3.516 ± 0.028

10.331 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.246 ± 0.017

2.89 ± 0.029

4.804 ± 0.032

3.782 ± 0.023

5.952 ± 0.048

6.343 ± 0.03

5.683 ± 0.034

7.68 ± 0.034

1.409 ± 0.019

2.19 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski